RNA–Protein interactions for RNA: ENST00000553744.1

TMEM253-202, Transcript of transmembrane protein 253, humanhuman

TSL 3

Gene TMEM253, Length 195 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM253-202ENST00000553744 MUTP22033 750 aa13.27□□□□□ -0.29
TMEM253-202ENST00000553744 LPIN1Q14693 890 aa13.27□□□□□ -0.29
TMEM253-202ENST00000553744 SF3A1Q15459 793 aaKnown RBP13.27□□□□□ -0.29
TMEM253-202ENST00000553744 XKR9Q5GH70 373 aa13.27□□□□□ -0.29
TMEM253-202ENST00000553744 FAM173BQ6P4H8 233 aa13.27□□□□□ -0.29
TMEM253-202ENST00000553744 TSHZ1Q6ZSZ6 1077 aa13.27□□□□□ -0.29
TMEM253-202ENST00000553744 EXOC8Q8IYI6 725 aa13.27□□□□□ -0.29
TMEM253-202ENST00000553744 ZNF579Q8NAF0 562 aaKnown RBP13.27□□□□□ -0.29
TMEM253-202ENST00000553744 SLC7A3Q8WY07 619 aa13.27□□□□□ -0.29
TMEM253-202ENST00000553744 SEPT8Q92599 483 aa13.27□□□□□ -0.29
TMEM253-202ENST00000553744 APBB2Q92870 758 aa13.27□□□□□ -0.29
TMEM253-202ENST00000553744 IFIH1Q9BYX4 1025 aaKnown RBP13.27□□□□□ -0.29
TMEM253-202ENST00000553744 DHX33Q9H6R0 707 aaKnown RBP13.27□□□□□ -0.29
TMEM253-202ENST00000553744 SUGCTQ9HAC7 445 aa13.27□□□□□ -0.29
TMEM253-202ENST00000553744 ANKEF1Q9NU02 776 aa13.27□□□□□ -0.29
TMEM253-202ENST00000553744 STK24Q9Y6E0 443 aa13.27□□□□□ -0.29
TMEM253-202ENST00000553744 SLC4A7Q9Y6M7 1214 aa13.27□□□□□ -0.29
TMEM253-202ENST00000553744 ARID2Q68CP9 1835 aa13.27□□□□□ -0.29
TMEM253-202ENST00000553744 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.26□□□□□ -0.29
TMEM253-202ENST00000553744 ABHD14A-ACY1A0A1B0GW23 586 aa13.26□□□□□ -0.29
TMEM253-202ENST00000553744 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.26□□□□□ -0.29
TMEM253-202ENST00000553744 EFCAB14O75071 495 aa13.26□□□□□ -0.29
TMEM253-202ENST00000553744 GPR32O75388 356 aa13.26□□□□□ -0.29
TMEM253-202ENST00000553744 CCT6AP40227 531 aaKnown RBP13.26□□□□□ -0.29
TMEM253-202ENST00000553744 RFC5P40937 340 aa13.26□□□□□ -0.29
TMEM253-202ENST00000553744 POLGP54098 1239 aaPredicted RBP13.26□□□□□ -0.29
TMEM253-202ENST00000553744 WDR5P61964 334 aaKnown RBP13.26□□□□□ -0.29
TMEM253-202ENST00000553744 SMAD3P84022 425 aaKnown RBP13.26□□□□□ -0.29
TMEM253-202ENST00000553744 MKRN4PQ13434 485 aaPredicted RBP13.26□□□□□ -0.29
TMEM253-202ENST00000553744 DRP2Q13474 957 aa13.26□□□□□ -0.29
TMEM253-202ENST00000553744 IKBKEQ14164 716 aa13.26□□□□□ -0.29
TMEM253-202ENST00000553744 BECN1Q14457 450 aa13.26□□□□□ -0.29
TMEM253-202ENST00000553744 KIZQ2M2Z5 673 aa13.26□□□□□ -0.29
TMEM253-202ENST00000553744 FAM109BQ6ICB4 259 aaPredicted RBP13.26□□□□□ -0.29
TMEM253-202ENST00000553744 POTEGQ6S5H5 508 aa13.26□□□□□ -0.29
TMEM253-202ENST00000553744 ZNF710Q8N1W2 664 aa13.26□□□□□ -0.29
TMEM253-202ENST00000553744 USP38Q8NB14 1042 aa13.26□□□□□ -0.29
TMEM253-202ENST00000553744 SNX29Q8TEQ0 813 aa13.26□□□□□ -0.29
TMEM253-202ENST00000553744 PIGOQ8TEQ8 1089 aa13.26□□□□□ -0.29
TMEM253-202ENST00000553744 CCDC43Q96MW1 224 aaKnown RBP13.26□□□□□ -0.29
TMEM253-202ENST00000553744 PPP1R16BQ96T49 567 aa13.26□□□□□ -0.29
TMEM253-202ENST00000553744 GINS2Q9Y248 185 aa13.26□□□□□ -0.29
TMEM253-202ENST00000553744 CLIC4Q9Y696 253 aa13.26□□□□□ -0.29
TMEM253-202ENST00000553744 VWA3AA6NCI4 1184 aa13.25□□□□□ -0.29
TMEM253-202ENST00000553744 PP2D1A8MPX8 630 aa13.25□□□□□ -0.29
TMEM253-202ENST00000553744 GAS2O43903 313 aaKnown RBP13.25□□□□□ -0.29
TMEM253-202ENST00000553744 ZSCAN22P10073 491 aaPredicted RBP13.25□□□□□ -0.29
TMEM253-202ENST00000553744 XRCC6P12956 609 aaKnown RBP eCLIP13.25□□□□□ -0.29
TMEM253-202ENST00000553744 ATP2A2P16615 1042 aaKnown RBP13.25□□□□□ -0.29
TMEM253-202ENST00000553744 KCNJ6P48051 423 aa13.25□□□□□ -0.29
TMEM253-202ENST00000553744 RARRES1P49788 294 aa13.25□□□□□ -0.29
TMEM253-202ENST00000553744 DNM2P50570 870 aa13.25□□□□□ -0.29
TMEM253-202ENST00000553744 GPC3P51654 580 aa13.25□□□□□ -0.29
TMEM253-202ENST00000553744 CRYBB1P53674 252 aaPredicted RBP13.25□□□□□ -0.29
TMEM253-202ENST00000553744 NLRP11P59045 1033 aaKnown RBP13.25□□□□□ -0.29
TMEM253-202ENST00000553744 EMC2Q15006 297 aa13.25□□□□□ -0.29
TMEM253-202ENST00000553744 PTPAQ15257 358 aa13.25□□□□□ -0.29
TMEM253-202ENST00000553744 ECM1Q16610 540 aa13.25□□□□□ -0.29
TMEM253-202ENST00000553744 KRT79Q5XKE5 535 aa13.25□□□□□ -0.29
TMEM253-202ENST00000553744 NACC1Q96RE7 527 aa13.25□□□□□ -0.29
TMEM253-202ENST00000553744 SLC9A7Q96T83 725 aa13.25□□□□□ -0.29
TMEM253-202ENST00000553744 OSMRQ99650 979 aa13.25□□□□□ -0.29
TMEM253-202ENST00000553744 ADAMTS10Q9H324 1103 aa13.25□□□□□ -0.29
TMEM253-202ENST00000553744 AGO3Q9H9G7 860 aaKnown RBP13.25□□□□□ -0.29
TMEM253-202ENST00000553744 CDHR5Q9HBB8 845 aa13.25□□□□□ -0.29
TMEM253-202ENST00000553744 BMP2KQ9NSY1 1161 aaPredicted RBP13.25□□□□□ -0.29
TMEM253-202ENST00000553744 DBR1Q9UK59 544 aaKnown RBP13.25□□□□□ -0.29
TMEM253-202ENST00000553744 A0A087WWV3 80 aa13.24□□□□□ -0.29
TMEM253-202ENST00000553744 DGAT1O75907 488 aa13.24□□□□□ -0.29
TMEM253-202ENST00000553744 F13A1P00488 732 aa13.24□□□□□ -0.29
TMEM253-202ENST00000553744 CDC25AP30304 524 aa13.24□□□□□ -0.29
TMEM253-202ENST00000553744 CD52P31358 61 aa13.24□□□□□ -0.29
TMEM253-202ENST00000553744 DEFB103AP81534 67 aa13.24□□□□□ -0.29
TMEM253-202ENST00000553744 PAK2Q13177 524 aa13.24□□□□□ -0.29
TMEM253-202ENST00000553744 PKP1Q13835 747 aa13.24□□□□□ -0.29
TMEM253-202ENST00000553744 FOXD4L5Q5VV16 416 aaPredicted RBP13.24□□□□□ -0.29
TMEM253-202ENST00000553744 PHOSPHO2Q8TCD6 241 aa13.24□□□□□ -0.29
TMEM253-202ENST00000553744 TMEM40Q8WWA1 233 aa13.24□□□□□ -0.29
TMEM253-202ENST00000553744 TCP11Q8WWU5 503 aa13.24□□□□□ -0.29
TMEM253-202ENST00000553744 FOXD4L4Q8WXT5 416 aaPredicted RBP13.24□□□□□ -0.29
TMEM253-202ENST00000553744 AK8Q96MA6 479 aa13.24□□□□□ -0.29
TMEM253-202ENST00000553744 USP28Q96RU2 1077 aa13.24□□□□□ -0.29
TMEM253-202ENST00000553744 MTRQ99707 1265 aa13.24□□□□□ -0.29
TMEM253-202ENST00000553744 MMTAG2Q9BU76 263 aaKnown RBP13.24□□□□□ -0.29
TMEM253-202ENST00000553744 ATP6V0A4Q9HBG4 840 aa13.24□□□□□ -0.29
TMEM253-202ENST00000553744 XPNPEP1Q9NQW7 623 aa13.24□□□□□ -0.29
TMEM253-202ENST00000553744 SUCLA2Q9P2R7 463 aaPredicted RBP13.24□□□□□ -0.29
TMEM253-202ENST00000553744 PADI3Q9ULW8 664 aa13.24□□□□□ -0.29
TMEM253-202ENST00000553744 VCANP13611 3396 aa13.24□□□□□ -0.29
TMEM253-202ENST00000553744 EVPLQ92817 2033 aa13.23□□□□□ -0.29
TMEM253-202ENST00000553744 GRXCR1A8MXD5 290 aa13.23□□□□□ -0.29
TMEM253-202ENST00000553744 USO1O60763 962 aaKnown RBP13.23□□□□□ -0.29
TMEM253-202ENST00000553744 RPS6KA5O75582 802 aa13.23□□□□□ -0.29
TMEM253-202ENST00000553744 CDC42EP1Q00587 391 aa13.23□□□□□ -0.29
TMEM253-202ENST00000553744 HYIQ5T013 277 aa13.23□□□□□ -0.29
TMEM253-202ENST00000553744 ZNF410Q86VK4 478 aa13.23□□□□□ -0.29
TMEM253-202ENST00000553744 FAM228AQ86W67 206 aa13.23□□□□□ -0.29
TMEM253-202ENST00000553744 RHPN2Q8IUC4 686 aa13.23□□□□□ -0.29
TMEM253-202ENST00000553744 NLRP7Q8WX94 980 aa13.23□□□□□ -0.29
TMEM253-202ENST00000553744 PSPC1Q8WXF1 523 aaKnown RBP13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms