RNA–Protein interactions for RNA: ENST00000553578.5

RDH11-204, Transcript of retinol dehydrogenase 11, humanhuman

TSL 1 (best)

Gene RDH11, Length 4,035 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-204ENST00000553578 NANOS1Q8WY41 292 aaKnown RBP4.42□□□□□ -1.7
RDH11-204ENST00000553578 HPS3Q969F9 1004 aa4.42□□□□□ -1.7
RDH11-204ENST00000553578 CLIP3Q96DZ5 547 aa4.42□□□□□ -1.7
RDH11-204ENST00000553578 CNTNAP3BQ96NU0 1288 aa4.42□□□□□ -1.7
RDH11-204ENST00000553578 FAM126AQ9BYI3 521 aaPredicted RBP4.42□□□□□ -1.7
RDH11-204ENST00000553578 CNTNAP3Q9BZ76 1288 aa4.42□□□□□ -1.7
RDH11-204ENST00000553578 ECHDC1Q9NTX5 307 aa4.42□□□□□ -1.7
RDH11-204ENST00000553578 TMEM63CQ9P1W3 806 aa4.42□□□□□ -1.7
RDH11-204ENST00000553578 SEL1LQ9UBV2 794 aa4.42□□□□□ -1.7
RDH11-204ENST00000553578 CORO2BQ9UQ03 480 aa4.42□□□□□ -1.7
RDH11-204ENST00000553578 TMEM98Q9Y2Y6 226 aa4.42□□□□□ -1.7
RDH11-204ENST00000553578 USP3Q9Y6I4 520 aa4.42□□□□□ -1.7
RDH11-204ENST00000553578 A0A1W2PNR3 127 aa4.42□□□□□ -1.7
RDH11-204ENST00000553578 PRAMEF22A3QJZ6 481 aa4.42□□□□□ -1.7
RDH11-204ENST00000553578 UBAP1LF5GYI3 381 aa4.42□□□□□ -1.7
RDH11-204ENST00000553578 GPR25O00155 361 aa4.42□□□□□ -1.7
RDH11-204ENST00000553578 TRPA1O75762 1119 aa4.42□□□□□ -1.7
RDH11-204ENST00000553578 ATICP31939 592 aa4.42□□□□□ -1.7
RDH11-204ENST00000553578 KIF11P52732 1056 aa4.42□□□□□ -1.7
RDH11-204ENST00000553578 PDIA5Q14554 519 aa4.42□□□□□ -1.7
RDH11-204ENST00000553578 SLC9A5Q14940 896 aa4.42□□□□□ -1.7
RDH11-204ENST00000553578 IMMTQ16891 758 aaKnown RBP4.42□□□□□ -1.7
RDH11-204ENST00000553578 CFAP100Q494V2 611 aa4.42□□□□□ -1.7
RDH11-204ENST00000553578 DSTYKQ6XUX3 929 aa4.42□□□□□ -1.7
RDH11-204ENST00000553578 DNAJB7Q7Z6W7 309 aaPredicted RBP4.42□□□□□ -1.7
RDH11-204ENST00000553578 MYOCDQ8IZQ8 938 aa4.42□□□□□ -1.7
RDH11-204ENST00000553578 CCAR2Q8N163 923 aaKnown RBP4.42□□□□□ -1.7
RDH11-204ENST00000553578 SLC43A3Q8NBI5 491 aa4.42□□□□□ -1.7
RDH11-204ENST00000553578 USP33Q8TEY7 942 aa4.42□□□□□ -1.7
RDH11-204ENST00000553578 LMBR1Q8WVP7 490 aa4.42□□□□□ -1.7
RDH11-204ENST00000553578 BHMTQ93088 406 aa4.42□□□□□ -1.7
RDH11-204ENST00000553578 ZKSCAN4Q969J2 545 aaPredicted RBP4.42□□□□□ -1.7
RDH11-204ENST00000553578 SLC39A3Q9BRY0 314 aa4.42□□□□□ -1.7
RDH11-204ENST00000553578 COL25A1Q9BXS0 654 aaPredicted RBP4.42□□□□□ -1.7
RDH11-204ENST00000553578 BRD8Q9H0E9 1235 aa4.42□□□□□ -1.7
RDH11-204ENST00000553578 MUC3BQ9H195 1237 aa4.42□□□□□ -1.7
RDH11-204ENST00000553578 FAM53CQ9NYF3 392 aa4.42□□□□□ -1.7
RDH11-204ENST00000553578 CDC23Q9UJX2 597 aa4.42□□□□□ -1.7
RDH11-204ENST00000553578 PRELID1Q9Y255 219 aa4.42□□□□□ -1.7
RDH11-204ENST00000553578 AKAP10O43572 662 aa4.42□□□□□ -1.7
RDH11-204ENST00000553578 SMIM24O75264 130 aa4.42□□□□□ -1.7
RDH11-204ENST00000553578 SLC3A2P08195 630 aaKnown RBP4.42□□□□□ -1.7
RDH11-204ENST00000553578 EPB42P16452 691 aa4.42□□□□□ -1.7
RDH11-204ENST00000553578 IGFBP4P22692 258 aa4.42□□□□□ -1.7
RDH11-204ENST00000553578 UBE4AQ14139 1066 aa4.42□□□□□ -1.7
RDH11-204ENST00000553578 KIAA0753Q2KHM9 967 aa4.42□□□□□ -1.7
RDH11-204ENST00000553578 GRAMD1CQ8IYS0 662 aa4.42□□□□□ -1.7
RDH11-204ENST00000553578 C16orf71Q8IYS4 520 aaPredicted RBP4.42□□□□□ -1.7
RDH11-204ENST00000553578 SMARCC2Q8TAQ2 1214 aa4.42□□□□□ -1.7
RDH11-204ENST00000553578 RELTQ969Z4 430 aa4.42□□□□□ -1.7
RDH11-204ENST00000553578 SLC2A13Q96QE2 648 aa4.42□□□□□ -1.7
RDH11-204ENST00000553578 TSC22D3Q99576 134 aa4.42□□□□□ -1.7
RDH11-204ENST00000553578 FSD1Q9BTV5 496 aa4.42□□□□□ -1.7
RDH11-204ENST00000553578 BICC1Q9H694 974 aaKnown RBP4.42□□□□□ -1.7
RDH11-204ENST00000553578 BRD9Q9H8M2 597 aa4.42□□□□□ -1.7
RDH11-204ENST00000553578 METTL5Q9NRN9 209 aaKnown RBP4.42□□□□□ -1.7
RDH11-204ENST00000553578 HMG20BQ9P0W2 317 aa4.42□□□□□ -1.7
RDH11-204ENST00000553578 TAGLN3Q9UI15 199 aa4.42□□□□□ -1.7
RDH11-204ENST00000553578 COL11A2P13942 1736 aaPredicted RBP4.41□□□□□ -1.7
RDH11-204ENST00000553578 TCEA3O75764 348 aa4.41□□□□□ -1.7
RDH11-204ENST00000553578 CSPG5O95196 566 aa4.41□□□□□ -1.7
RDH11-204ENST00000553578 APOL3O95236 402 aa4.41□□□□□ -1.7
RDH11-204ENST00000553578 FGRP09769 529 aa4.41□□□□□ -1.7
RDH11-204ENST00000553578 PARP1P09874 1014 aaKnown RBP4.41□□□□□ -1.7
RDH11-204ENST00000553578 IFIT1P09914 478 aaKnown RBP4.41□□□□□ -1.7
RDH11-204ENST00000553578 MX2P20592 715 aa4.41□□□□□ -1.7
RDH11-204ENST00000553578 EPHA4P54764 986 aa4.41□□□□□ -1.7
RDH11-204ENST00000553578 CABP4P57796 275 aa4.41□□□□□ -1.7
RDH11-204ENST00000553578 DAB2P98082 770 aa4.41□□□□□ -1.7
RDH11-204ENST00000553578 FOXK2Q01167 660 aa4.41□□□□□ -1.7
RDH11-204ENST00000553578 TDGQ13569 410 aa4.41□□□□□ -1.7
RDH11-204ENST00000553578 CUL3Q13618 768 aa4.41□□□□□ -1.7
RDH11-204ENST00000553578 ELOAQ14241 798 aaKnown RBP4.41□□□□□ -1.7
RDH11-204ENST00000553578 PUM3Q15397 648 aaKnown RBP4.41□□□□□ -1.7
RDH11-204ENST00000553578 DALRD3Q5D0E6 543 aaKnown RBP4.41□□□□□ -1.7
RDH11-204ENST00000553578 EPHA10Q5JZY3 1008 aa4.41□□□□□ -1.7
RDH11-204ENST00000553578 GALNT17Q6IS24 598 aa4.41□□□□□ -1.7
RDH11-204ENST00000553578 UNC5CLQ8IV45 518 aa4.41□□□□□ -1.7
RDH11-204ENST00000553578 OTUD7AQ8TE49 926 aaPredicted RBP4.41□□□□□ -1.7
RDH11-204ENST00000553578 BCO2Q9BYV7 579 aa4.41□□□□□ -1.7
RDH11-204ENST00000553578 HOMER3Q9NSC5 361 aa4.41□□□□□ -1.7
RDH11-204ENST00000553578 LMBRD1Q9NUN5 540 aa4.41□□□□□ -1.7
RDH11-204ENST00000553578 PSD3Q9NYI0 1048 aa4.41□□□□□ -1.7
RDH11-204ENST00000553578 SIRPGQ9P1W8 387 aa4.41□□□□□ -1.7
RDH11-204ENST00000553578 PAIP2BQ9ULR5 123 aaKnown RBP4.41□□□□□ -1.7
RDH11-204ENST00000553578 EDARQ9UNE0 448 aa4.41□□□□□ -1.7
RDH11-204ENST00000553578 GTF2A1LQ9UNN4 478 aa4.41□□□□□ -1.7
RDH11-204ENST00000553578 LRCH1Q9Y2L9 728 aa4.41□□□□□ -1.7
RDH11-204ENST00000553578 SALL1Q9NSC2 1324 aa4.41□□□□□ -1.7
RDH11-204ENST00000553578 FAM181BA6NEQ2 426 aa4.41□□□□□ -1.7
RDH11-204ENST00000553578 AP3D1O14617 1153 aa4.41□□□□□ -1.7
RDH11-204ENST00000553578 PRPF3O43395 683 aaKnown RBP4.41□□□□□ -1.7
RDH11-204ENST00000553578 ZKSCAN1P17029 563 aaPredicted RBP4.41□□□□□ -1.7
RDH11-204ENST00000553578 TNFAIP3P21580 790 aa4.41□□□□□ -1.7
RDH11-204ENST00000553578 IL15P40933 162 aaPredicted RBP4.41□□□□□ -1.7
RDH11-204ENST00000553578 PAPOLAP51003 745 aaKnown RBP4.41□□□□□ -1.7
RDH11-204ENST00000553578 CUL4BQ13620 913 aa4.41□□□□□ -1.7
RDH11-204ENST00000553578 RAB33AQ14088 237 aa4.41□□□□□ -1.7
RDH11-204ENST00000553578 ALX1Q15699 326 aa4.41□□□□□ -1.7
RDH11-204ENST00000553578 PERM1Q5SV97 790 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms