RNA–Protein interactions for RNA: ENST00000553544.1

SRP54-203, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 491 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-203ENST00000553544 hCG_1984214I3L0E3 225 aa13.44□□□□□ -0.26
SRP54-203ENST00000553544 FSCN2O14926 492 aa13.44□□□□□ -0.26
SRP54-203ENST00000553544 RPS6KA5O75582 802 aa13.44□□□□□ -0.26
SRP54-203ENST00000553544 PDGFBP01127 241 aaPredicted RBP13.44□□□□□ -0.26
SRP54-203ENST00000553544 METAP2P50579 478 aaKnown RBP eCLIP13.44□□□□□ -0.26
SRP54-203ENST00000553544 STAT5BP51692 787 aa13.44□□□□□ -0.26
SRP54-203ENST00000553544 FGD1P98174 961 aa13.44□□□□□ -0.26
SRP54-203ENST00000553544 KCNC3Q14003 757 aa13.44□□□□□ -0.26
SRP54-203ENST00000553544 UBE2SQ16763 222 aa13.44□□□□□ -0.26
SRP54-203ENST00000553544 TMEM266Q2M3C6 531 aa13.44□□□□□ -0.26
SRP54-203ENST00000553544 PPP1R18Q6NYC8 613 aa13.44□□□□□ -0.26
SRP54-203ENST00000553544 SYCE2Q6PIF2 218 aa13.44□□□□□ -0.26
SRP54-203ENST00000553544 MTHFD1LQ6UB35 978 aa13.44□□□□□ -0.26
SRP54-203ENST00000553544 ZNF713Q8N859 430 aaPredicted RBP13.44□□□□□ -0.26
SRP54-203ENST00000553544 COLGALT1Q8NBJ5 622 aa13.44□□□□□ -0.26
SRP54-203ENST00000553544 KREMEN2Q8NCW0 462 aa13.44□□□□□ -0.26
SRP54-203ENST00000553544 PCYT2Q99447 389 aa13.44□□□□□ -0.26
SRP54-203ENST00000553544 ADAM2Q99965 735 aa13.44□□□□□ -0.26
SRP54-203ENST00000553544 APOL5Q9BWW9 433 aa13.44□□□□□ -0.26
SRP54-203ENST00000553544 ZSWIM6Q9HCJ5 1215 aa13.44□□□□□ -0.26
SRP54-203ENST00000553544 NGRNQ9NPE2 291 aaKnown RBP13.44□□□□□ -0.26
SRP54-203ENST00000553544 RIC8AQ9NPQ8 531 aa13.44□□□□□ -0.26
SRP54-203ENST00000553544 BARHL2Q9NY43 387 aa13.44□□□□□ -0.26
SRP54-203ENST00000553544 SLC9A2Q9UBY0 812 aa13.44□□□□□ -0.26
SRP54-203ENST00000553544 PCDHA6Q9UN73 950 aa13.44□□□□□ -0.26
SRP54-203ENST00000553544 GINS2Q9Y248 185 aa13.44□□□□□ -0.26
SRP54-203ENST00000553544 PCDHA8Q9Y5H6 950 aa13.44□□□□□ -0.26
SRP54-203ENST00000553544 CCDC196A0A1B0GTZ2 297 aa13.43□□□□□ -0.26
SRP54-203ENST00000553544 SPDYE3A6NKU9 549 aa13.43□□□□□ -0.26
SRP54-203ENST00000553544 GPR182O15218 404 aa13.43□□□□□ -0.26
SRP54-203ENST00000553544 KLRC1P26715 233 aa13.43□□□□□ -0.26
SRP54-203ENST00000553544 NAPAP54920 295 aa13.43□□□□□ -0.26
SRP54-203ENST00000553544 FAM189BP81408 668 aa13.43□□□□□ -0.26
SRP54-203ENST00000553544 PLCB3Q01970 1234 aa13.43□□□□□ -0.26
SRP54-203ENST00000553544 KRT17Q04695 432 aa13.43□□□□□ -0.26
SRP54-203ENST00000553544 MTMR3Q13615 1198 aa13.43□□□□□ -0.26
SRP54-203ENST00000553544 PLCB4Q15147 1175 aa13.43□□□□□ -0.26
SRP54-203ENST00000553544 CES5AQ6NT32 575 aa13.43□□□□□ -0.26
SRP54-203ENST00000553544 LLGL2Q6P1M3 1020 aa13.43□□□□□ -0.26
SRP54-203ENST00000553544 RUFY3Q7L099 469 aa13.43□□□□□ -0.26
SRP54-203ENST00000553544 ASCL5Q7RTU5 278 aa13.43□□□□□ -0.26
SRP54-203ENST00000553544 TRAPPC12Q8WVT3 735 aa13.43□□□□□ -0.26
SRP54-203ENST00000553544 MRPS27Q92552 414 aaKnown RBP13.43□□□□□ -0.26
SRP54-203ENST00000553544 SDF4Q9BRK5 362 aa13.43□□□□□ -0.26
SRP54-203ENST00000553544 TM6SF1Q9BZW5 370 aa13.43□□□□□ -0.26
SRP54-203ENST00000553544 ATP6V0A4Q9HBG4 840 aa13.43□□□□□ -0.26
SRP54-203ENST00000553544 ERVK-5Q9HDB9 667 aa13.43□□□□□ -0.26
SRP54-203ENST00000553544 TSHZ2Q9NRE2 1034 aa13.43□□□□□ -0.26
SRP54-203ENST00000553544 ST3GAL5Q9UNP4 418 aa13.43□□□□□ -0.26
SRP54-203ENST00000553544 MGEA5O60502 916 aa13.42□□□□□ -0.26
SRP54-203ENST00000553544 LAG3P18627 525 aa13.42□□□□□ -0.26
SRP54-203ENST00000553544 SP100P23497 879 aaPredicted RBP13.42□□□□□ -0.26
SRP54-203ENST00000553544 NBL1P41271 181 aa13.42□□□□□ -0.26
SRP54-203ENST00000553544 CLK2P49760 499 aaKnown RBP13.42□□□□□ -0.26
SRP54-203ENST00000553544 SLC26A2P50443 739 aa13.42□□□□□ -0.26
SRP54-203ENST00000553544 TOB2Q14106 344 aaPredicted RBP13.42□□□□□ -0.26
SRP54-203ENST00000553544 NTRK3Q16288 839 aa13.42□□□□□ -0.26
SRP54-203ENST00000553544 PFKFB3Q16875 520 aaPredicted RBP13.42□□□□□ -0.26
SRP54-203ENST00000553544 TPRNQ4KMQ1 711 aa13.42□□□□□ -0.26
SRP54-203ENST00000553544 PLPP4Q5VZY2 271 aa13.42□□□□□ -0.26
SRP54-203ENST00000553544 NECTIN4Q96NY8 510 aa13.42□□□□□ -0.26
SRP54-203ENST00000553544 TCF25Q9BQ70 676 aa13.42□□□□□ -0.26
SRP54-203ENST00000553544 CWH43Q9H720 699 aa13.42□□□□□ -0.26
SRP54-203ENST00000553544 ENTPD7Q9NQZ7 604 aa13.42□□□□□ -0.26
SRP54-203ENST00000553544 KCNH7Q9NS40 1196 aa13.42□□□□□ -0.26
SRP54-203ENST00000553544 SORCS3Q9UPU3 1222 aa13.42□□□□□ -0.26
SRP54-203ENST00000553544 NOC2LQ9Y3T9 749 aaKnown RBP13.42□□□□□ -0.26
SRP54-203ENST00000553544 WDR87Q6ZQQ6 2873 aa13.42□□□□□ -0.26
SRP54-203ENST00000553544 ATG2AQ2TAZ0 1938 aa13.42□□□□□ -0.26
SRP54-203ENST00000553544 FAM186AA6NE01 2351 aa13.41□□□□□ -0.26
SRP54-203ENST00000553544 SMCO2A6NFE2 343 aa13.41□□□□□ -0.26
SRP54-203ENST00000553544 C9IYK1 514 aa13.41□□□□□ -0.26
SRP54-203ENST00000553544 PRPF3O43395 683 aaKnown RBP13.41□□□□□ -0.26
SRP54-203ENST00000553544 FOSP01100 380 aaPredicted RBP13.41□□□□□ -0.26
SRP54-203ENST00000553544 PDIA3P30101 505 aaKnown RBP13.41□□□□□ -0.26
SRP54-203ENST00000553544 ACTR2P61160 394 aa13.41□□□□□ -0.26
SRP54-203ENST00000553544 ITIH3Q06033 890 aa13.41□□□□□ -0.26
SRP54-203ENST00000553544 ASTLQ6HA08 431 aaPredicted RBP13.41□□□□□ -0.26
SRP54-203ENST00000553544 ERMP1Q7Z2K6 904 aa13.41□□□□□ -0.26
SRP54-203ENST00000553544 TMC7Q7Z402 723 aa13.41□□□□□ -0.26
SRP54-203ENST00000553544 KIAA0319LQ8IZA0 1049 aa13.41□□□□□ -0.26
SRP54-203ENST00000553544 CASP10Q92851 521 aa13.41□□□□□ -0.26
SRP54-203ENST00000553544 MXRA8Q9BRK3 442 aa13.41□□□□□ -0.26
SRP54-203ENST00000553544 GLT8D2Q9H1C3 349 aa13.41□□□□□ -0.26
SRP54-203ENST00000553544 ADAM7Q9H2U9 754 aa13.41□□□□□ -0.26
SRP54-203ENST00000553544 ELAC1Q9H777 363 aaKnown RBP13.41□□□□□ -0.26
SRP54-203ENST00000553544 CDHR5Q9HBB8 845 aa13.41□□□□□ -0.26
SRP54-203ENST00000553544 TMEM161AQ9NX61 479 aa13.41□□□□□ -0.26
SRP54-203ENST00000553544 NAP1L2Q9ULW6 460 aaPredicted RBP13.41□□□□□ -0.26
SRP54-203ENST00000553544 PRR23AA6NEV1 266 aa13.4□□□□□ -0.26
SRP54-203ENST00000553544 HIDE1A8MVS5 230 aa13.4□□□□□ -0.26
SRP54-203ENST00000553544 HOXA2O43364 376 aa13.4□□□□□ -0.26
SRP54-203ENST00000553544 HBP1O60381 514 aa13.4□□□□□ -0.26
SRP54-203ENST00000553544 EIF5BO60841 1220 aaKnown RBP13.4□□□□□ -0.26
SRP54-203ENST00000553544 BRD1O95696 1058 aa13.4□□□□□ -0.26
SRP54-203ENST00000553544 IFNAR1P17181 557 aa13.4□□□□□ -0.26
SRP54-203ENST00000553544 ADCY7P51828 1080 aa13.4□□□□□ -0.26
SRP54-203ENST00000553544 AP3B2Q13367 1082 aa13.4□□□□□ -0.26
SRP54-203ENST00000553544 TMEM105Q8N8V8 129 aa13.4□□□□□ -0.26
SRP54-203ENST00000553544 NKD2Q969F2 451 aaPredicted RBP13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms