RNA–Protein interactions for RNA: ENST00000552691.1

ERBB3-220, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 3

Gene ERBB3, Length 291 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-220ENST00000552691 PADI6Q6TGC4 694 aa4.72□□□□□ -1.65
ERBB3-220ENST00000552691 RBM43Q6ZSC3 357 aaKnown RBP4.72□□□□□ -1.65
ERBB3-220ENST00000552691 MAEAQ7L5Y9 396 aa4.72□□□□□ -1.65
ERBB3-220ENST00000552691 EXOC8Q8IYI6 725 aa4.72□□□□□ -1.65
ERBB3-220ENST00000552691 SPATA20Q8TB22 786 aa4.72□□□□□ -1.65
ERBB3-220ENST00000552691 U2AF1L4Q8WU68 220 aaKnown RBP4.72□□□□□ -1.65
ERBB3-220ENST00000552691 PPP1R13LQ8WUF5 828 aa4.72□□□□□ -1.65
ERBB3-220ENST00000552691 TRAPPC12Q8WVT3 735 aa4.72□□□□□ -1.65
ERBB3-220ENST00000552691 DNAJC19Q96DA6 116 aa4.72□□□□□ -1.65
ERBB3-220ENST00000552691 CCDC43Q96MW1 224 aaKnown RBP4.72□□□□□ -1.65
ERBB3-220ENST00000552691 DEFB118Q96PH6 123 aa4.72□□□□□ -1.65
ERBB3-220ENST00000552691 GSDMAQ96QA5 445 aa4.72□□□□□ -1.65
ERBB3-220ENST00000552691 CRISPLD2Q9H0B8 497 aa4.72□□□□□ -1.65
ERBB3-220ENST00000552691 DHX33Q9H6R0 707 aaKnown RBP4.72□□□□□ -1.65
ERBB3-220ENST00000552691 POLD4Q9HCU8 107 aa4.72□□□□□ -1.65
ERBB3-220ENST00000552691 BMP2KQ9NSY1 1161 aaPredicted RBP4.72□□□□□ -1.65
ERBB3-220ENST00000552691 KCND2Q9NZV8 630 aa4.72□□□□□ -1.65
ERBB3-220ENST00000552691 HDAC6Q9UBN7 1215 aa4.72□□□□□ -1.65
ERBB3-220ENST00000552691 TRPC6Q9Y210 931 aa4.72□□□□□ -1.65
ERBB3-220ENST00000552691 PPME1Q9Y570 386 aa4.72□□□□□ -1.65
ERBB3-220ENST00000552691 PCDHA5Q9Y5H7 936 aa4.72□□□□□ -1.65
ERBB3-220ENST00000552691 COL1A2P08123 1366 aa4.72□□□□□ -1.65
ERBB3-220ENST00000552691 TANC1Q9C0D5 1861 aa4.72□□□□□ -1.65
ERBB3-220ENST00000552691 GRIN2DO15399 1336 aa4.72□□□□□ -1.65
ERBB3-220ENST00000552691 NRCAMQ92823 1304 aa4.72□□□□□ -1.65
ERBB3-220ENST00000552691 MKI67P46013 3256 aaKnown RBP4.71□□□□□ -1.65
ERBB3-220ENST00000552691 IGKV6-21A0A0C4DH24 114 aa4.71□□□□□ -1.66
ERBB3-220ENST00000552691 PVALEFA0A1B0GWK0 134 aa4.71□□□□□ -1.66
ERBB3-220ENST00000552691 A0A1W2PQ45 241 aaPredicted RBP4.71□□□□□ -1.66
ERBB3-220ENST00000552691 A0A1W2PQY0 241 aa4.71□□□□□ -1.66
ERBB3-220ENST00000552691 FRMD3A2A2Y4 597 aa4.71□□□□□ -1.66
ERBB3-220ENST00000552691 C17orf102A2RUQ5 167 aa4.71□□□□□ -1.66
ERBB3-220ENST00000552691 MBLAC1A4D2B0 266 aaPredicted RBP4.71□□□□□ -1.66
ERBB3-220ENST00000552691 RRN3P2A6NIE6 340 aa4.71□□□□□ -1.66
ERBB3-220ENST00000552691 SFI1A8K8P3 1242 aa4.71□□□□□ -1.66
ERBB3-220ENST00000552691 MAGEB2O15479 319 aa4.71□□□□□ -1.66
ERBB3-220ENST00000552691 TREHO43280 583 aa4.71□□□□□ -1.66
ERBB3-220ENST00000552691 GAS2O43903 313 aaKnown RBP4.71□□□□□ -1.66
ERBB3-220ENST00000552691 HIP1RO75146 1068 aa4.71□□□□□ -1.66
ERBB3-220ENST00000552691 MAFO75444 373 aaPredicted RBP4.71□□□□□ -1.66
ERBB3-220ENST00000552691 RHOBTB3O94955 611 aa4.71□□□□□ -1.66
ERBB3-220ENST00000552691 LETM1O95202 739 aaPredicted RBP4.71□□□□□ -1.66
ERBB3-220ENST00000552691 SMC2O95347 1197 aa4.71□□□□□ -1.66
ERBB3-220ENST00000552691 C22orf31O95567 290 aa4.71□□□□□ -1.66
ERBB3-220ENST00000552691 TFRCP02786 760 aaKnown RBP4.71□□□□□ -1.66
ERBB3-220ENST00000552691 RPN1P04843 607 aaKnown RBP4.71□□□□□ -1.66
ERBB3-220ENST00000552691 SMIM10L2AP0DMW4 78 aa4.71□□□□□ -1.66
ERBB3-220ENST00000552691 SMIM10L2BP0DMW5 78 aa4.71□□□□□ -1.66
ERBB3-220ENST00000552691 IDEP14735 1019 aa4.71□□□□□ -1.66
ERBB3-220ENST00000552691 GUCY2CP25092 1073 aa4.71□□□□□ -1.66
ERBB3-220ENST00000552691 HOXC8P31273 242 aa4.71□□□□□ -1.66
ERBB3-220ENST00000552691 RFC5P40937 340 aa4.71□□□□□ -1.66
ERBB3-220ENST00000552691 MNX1P50219 401 aaPredicted RBP4.71□□□□□ -1.66
ERBB3-220ENST00000552691 POLGP54098 1239 aaPredicted RBP4.71□□□□□ -1.66
ERBB3-220ENST00000552691 SOX10P56693 466 aa4.71□□□□□ -1.66
ERBB3-220ENST00000552691 IGBP1P78318 339 aa4.71□□□□□ -1.66
ERBB3-220ENST00000552691 ASIC1P78348 528 aa4.71□□□□□ -1.66
ERBB3-220ENST00000552691 ZNF200P98182 395 aaPredicted RBP4.71□□□□□ -1.66
ERBB3-220ENST00000552691 CACNB1Q02641 598 aaPredicted RBP4.71□□□□□ -1.66
ERBB3-220ENST00000552691 EHHADHQ08426 723 aa4.71□□□□□ -1.66
ERBB3-220ENST00000552691 TBC1D8BQ0IIM8 1120 aa4.71□□□□□ -1.66
ERBB3-220ENST00000552691 PPFIA1Q13136 1202 aa4.71□□□□□ -1.66
ERBB3-220ENST00000552691 MAPK7Q13164 816 aa4.71□□□□□ -1.66
ERBB3-220ENST00000552691 ITGA7Q13683 1181 aa4.71□□□□□ -1.66
ERBB3-220ENST00000552691 HIC1Q14526 733 aa4.71□□□□□ -1.66
ERBB3-220ENST00000552691 KCNB1Q14721 858 aa4.71□□□□□ -1.66
ERBB3-220ENST00000552691 EMC2Q15006 297 aa4.71□□□□□ -1.66
ERBB3-220ENST00000552691 ZSCAN23Q3MJ62 389 aa4.71□□□□□ -1.66
ERBB3-220ENST00000552691 KMT5BQ4FZB7 885 aa4.71□□□□□ -1.66
ERBB3-220ENST00000552691 ISM2Q6H9L7 571 aa4.71□□□□□ -1.66
ERBB3-220ENST00000552691 GDF6Q6KF10 455 aaPredicted RBP4.71□□□□□ -1.66
ERBB3-220ENST00000552691 EFCAB12Q6NXP0 572 aa4.71□□□□□ -1.66
ERBB3-220ENST00000552691 NFRKBQ6P4R8 1299 aa4.71□□□□□ -1.66
ERBB3-220ENST00000552691 MTHFD1LQ6UB35 978 aa4.71□□□□□ -1.66
ERBB3-220ENST00000552691 UNC13DQ70J99 1090 aa4.71□□□□□ -1.66
ERBB3-220ENST00000552691 SESTD1Q86VW0 696 aa4.71□□□□□ -1.66
ERBB3-220ENST00000552691 CCDC65Q8IXS2 484 aa4.71□□□□□ -1.66
ERBB3-220ENST00000552691 DAW1Q8N136 415 aa4.71□□□□□ -1.66
ERBB3-220ENST00000552691 LRRC71Q8N4P6 559 aa4.71□□□□□ -1.66
ERBB3-220ENST00000552691 C7orf31Q8N865 590 aa4.71□□□□□ -1.66
ERBB3-220ENST00000552691 SLC43A3Q8NBI5 491 aa4.71□□□□□ -1.66
ERBB3-220ENST00000552691 RETREG2Q8NC44 543 aa4.71□□□□□ -1.66
ERBB3-220ENST00000552691 MCPH1Q8NEM0 835 aa4.71□□□□□ -1.66
ERBB3-220ENST00000552691 LMBR1Q8WVP7 490 aa4.71□□□□□ -1.66
ERBB3-220ENST00000552691 TCP11Q8WWU5 503 aa4.71□□□□□ -1.66
ERBB3-220ENST00000552691 SLC7A3Q8WY07 619 aa4.71□□□□□ -1.66
ERBB3-220ENST00000552691 SMARCE1Q969G3 411 aa4.71□□□□□ -1.66
ERBB3-220ENST00000552691 VTI1AQ96AJ9 217 aa4.71□□□□□ -1.66
ERBB3-220ENST00000552691 ZBTB10Q96DT7 871 aa4.71□□□□□ -1.66
ERBB3-220ENST00000552691 GLT1D1Q96MS3 346 aa4.71□□□□□ -1.66
ERBB3-220ENST00000552691 JPH2Q9BR39 696 aaPredicted RBP4.71□□□□□ -1.66
ERBB3-220ENST00000552691 REEP2Q9BRK0 252 aa4.71□□□□□ -1.66
ERBB3-220ENST00000552691 TIPINQ9BVW5 301 aa4.71□□□□□ -1.66
ERBB3-220ENST00000552691 TMEM106CQ9BVX2 250 aa4.71□□□□□ -1.66
ERBB3-220ENST00000552691 SUGCTQ9HAC7 445 aa4.71□□□□□ -1.66
ERBB3-220ENST00000552691 ATP6V0A4Q9HBG4 840 aa4.71□□□□□ -1.66
ERBB3-220ENST00000552691 GPRC5CQ9NQ84 441 aa4.71□□□□□ -1.66
ERBB3-220ENST00000552691 XPNPEP1Q9NQW7 623 aa4.71□□□□□ -1.66
ERBB3-220ENST00000552691 STARD7Q9NQZ5 370 aa4.71□□□□□ -1.66
ERBB3-220ENST00000552691 SETD4Q9NVD3 440 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms