RNA–Protein interactions for RNA: ENST00000552465.1

CACNB3-222, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 557 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-222ENST00000552465 NR2E1Q9Y466 385 aa19.25■□□□□ 0.67
CACNB3-222ENST00000552465 PROB1E7EW31 1015 aa19.24■□□□□ 0.67
CACNB3-222ENST00000552465 DDX39AO00148 427 aaKnown RBP19.24■□□□□ 0.67
CACNB3-222ENST00000552465 GALR2O43603 387 aaPredicted RBP19.24■□□□□ 0.67
CACNB3-222ENST00000552465 FOSP01100 380 aaPredicted RBP19.24■□□□□ 0.67
CACNB3-222ENST00000552465 KIZQ2M2Z5 673 aa19.24■□□□□ 0.67
CACNB3-222ENST00000552465 WWC2Q6AWC2 1192 aa19.24■□□□□ 0.67
CACNB3-222ENST00000552465 PDXDC2PQ6P474 469 aa19.24■□□□□ 0.67
CACNB3-222ENST00000552465 KCNT2Q6UVM3 1135 aa19.24■□□□□ 0.67
CACNB3-222ENST00000552465 CCDC60Q8IWA6 550 aaPredicted RBP19.24■□□□□ 0.67
CACNB3-222ENST00000552465 TEX2Q8IWB9 1127 aa19.24■□□□□ 0.67
CACNB3-222ENST00000552465 CASD1Q96PB1 797 aa19.24■□□□□ 0.67
CACNB3-222ENST00000552465 PPP1R16BQ96T49 567 aa19.24■□□□□ 0.67
CACNB3-222ENST00000552465 OSMRQ99650 979 aa19.24■□□□□ 0.67
CACNB3-222ENST00000552465 ANO3Q9BYT9 981 aa19.24■□□□□ 0.67
CACNB3-222ENST00000552465 ZNF302Q9NR11 478 aa19.24■□□□□ 0.67
CACNB3-222ENST00000552465 GPR32O75388 356 aa19.23■□□□□ 0.67
CACNB3-222ENST00000552465 ATP4AP20648 1035 aa19.23■□□□□ 0.67
CACNB3-222ENST00000552465 KRT17Q04695 432 aa19.23■□□□□ 0.67
CACNB3-222ENST00000552465 TYW1BQ6NUM6 668 aa19.23■□□□□ 0.67
CACNB3-222ENST00000552465 SWSAP1Q6NVH7 229 aa19.23■□□□□ 0.67
CACNB3-222ENST00000552465 UBALD2Q8IYN6 164 aa19.23■□□□□ 0.67
CACNB3-222ENST00000552465 CASP10Q92851 521 aa19.23■□□□□ 0.67
CACNB3-222ENST00000552465 RNF19AQ9NV58 838 aa19.23■□□□□ 0.67
CACNB3-222ENST00000552465 CDH22Q9UJ99 828 aa19.23■□□□□ 0.67
CACNB3-222ENST00000552465 SORCS3Q9UPU3 1222 aa19.23■□□□□ 0.67
CACNB3-222ENST00000552465 FNDC1Q4ZHG4 1894 aaPredicted RBP19.22■□□□□ 0.67
CACNB3-222ENST00000552465 LOXHD1Q8IVV2 1947 aa19.22■□□□□ 0.67
CACNB3-222ENST00000552465 HOXA2O43364 376 aa19.22■□□□□ 0.67
CACNB3-222ENST00000552465 C22orf31O95567 290 aa19.22■□□□□ 0.67
CACNB3-222ENST00000552465 PPM1AP35813 382 aa19.22■□□□□ 0.67
CACNB3-222ENST00000552465 NAPAP54920 295 aa19.22■□□□□ 0.67
CACNB3-222ENST00000552465 MTMR3Q13615 1198 aa19.22■□□□□ 0.67
CACNB3-222ENST00000552465 TPRNQ4KMQ1 711 aa19.22■□□□□ 0.67
CACNB3-222ENST00000552465 MIS18BP1Q6P0N0 1132 aa19.22■□□□□ 0.67
CACNB3-222ENST00000552465 NIPA1Q7RTP0 329 aa19.22■□□□□ 0.67
CACNB3-222ENST00000552465 TMC7Q7Z402 723 aa19.22■□□□□ 0.67
CACNB3-222ENST00000552465 ZNF558Q96NG5 402 aa19.22■□□□□ 0.67
CACNB3-222ENST00000552465 ADAM7Q9H2U9 754 aa19.22■□□□□ 0.67
CACNB3-222ENST00000552465 TSHZ2Q9NRE2 1034 aa19.22■□□□□ 0.67
CACNB3-222ENST00000552465 SPG21Q9NZD8 308 aa19.22■□□□□ 0.67
CACNB3-222ENST00000552465 C2CD4DB7Z1M9 353 aa19.21■□□□□ 0.67
CACNB3-222ENST00000552465 DHX15O43143 795 aaKnown RBP19.21■□□□□ 0.67
CACNB3-222ENST00000552465 BRD1O95696 1058 aa19.21■□□□□ 0.67
CACNB3-222ENST00000552465 VTNP04004 478 aa19.21■□□□□ 0.67
CACNB3-222ENST00000552465 ZNF76P36508 570 aa19.21■□□□□ 0.67
CACNB3-222ENST00000552465 SREBF1P36956 1147 aa19.21■□□□□ 0.67
CACNB3-222ENST00000552465 PBX3P40426 434 aa19.21■□□□□ 0.67
CACNB3-222ENST00000552465 ADCY7P51828 1080 aa19.21■□□□□ 0.67
CACNB3-222ENST00000552465 ITIH3Q06033 890 aa19.21■□□□□ 0.67
CACNB3-222ENST00000552465 CES5AQ6NT32 575 aa19.21■□□□□ 0.67
CACNB3-222ENST00000552465 PPP1R18Q6NYC8 613 aa19.21■□□□□ 0.67
CACNB3-222ENST00000552465 LRRC43Q8N309 656 aa19.21■□□□□ 0.67
CACNB3-222ENST00000552465 METTL13Q8N6R0 699 aa19.21■□□□□ 0.67
CACNB3-222ENST00000552465 MRPL43Q8N983 215 aaKnown RBP19.21■□□□□ 0.67
CACNB3-222ENST00000552465 BBXQ8WY36 941 aaPredicted RBP19.21■□□□□ 0.67
CACNB3-222ENST00000552465 NECTIN4Q96NY8 510 aa19.21■□□□□ 0.67
CACNB3-222ENST00000552465 LRRC2Q9BYS8 371 aa19.21■□□□□ 0.67
CACNB3-222ENST00000552465 POMKQ9H5K3 350 aa19.21■□□□□ 0.67
CACNB3-222ENST00000552465 C2orf71A6NGG8 1288 aa19.2■□□□□ 0.66
CACNB3-222ENST00000552465 FOXK2Q01167 660 aa19.2■□□□□ 0.66
CACNB3-222ENST00000552465 SMC1AQ14683 1233 aaKnown RBP19.2■□□□□ 0.66
CACNB3-222ENST00000552465 ASCL5Q7RTU5 278 aa19.2■□□□□ 0.66
CACNB3-222ENST00000552465 SGMS1Q86VZ5 419 aa19.2■□□□□ 0.66
CACNB3-222ENST00000552465 MICU3Q86XE3 530 aa19.2■□□□□ 0.66
CACNB3-222ENST00000552465 PLA2G4DQ86XP0 818 aa19.2■□□□□ 0.66
CACNB3-222ENST00000552465 CKAP2LQ8IYA6 745 aa19.2■□□□□ 0.66
CACNB3-222ENST00000552465 TMEM105Q8N8V8 129 aa19.2■□□□□ 0.66
CACNB3-222ENST00000552465 MAFBQ9Y5Q3 323 aaPredicted RBP19.2■□□□□ 0.66
CACNB3-222ENST00000552465 HCFC2Q9Y5Z7 792 aa19.2■□□□□ 0.66
CACNB3-222ENST00000552465 CACNA1HO95180 2353 aa19.19■□□□□ 0.66
CACNB3-222ENST00000552465 SMCO2A6NFE2 343 aa19.19■□□□□ 0.66
CACNB3-222ENST00000552465 FAM86B1E9PN63 330 aa19.19■□□□□ 0.66
CACNB3-222ENST00000552465 SLC27A2O14975 620 aa19.19■□□□□ 0.66
CACNB3-222ENST00000552465 CLASP2O75122 1294 aaKnown RBP19.19■□□□□ 0.66
CACNB3-222ENST00000552465 FAM86B2P0C5J1 330 aa19.19■□□□□ 0.66
CACNB3-222ENST00000552465 ZSCAN20P17040 1043 aaPredicted RBP19.19■□□□□ 0.66
CACNB3-222ENST00000552465 CLK2P49760 499 aaKnown RBP19.19■□□□□ 0.66
CACNB3-222ENST00000552465 AP3B2Q13367 1082 aa19.19■□□□□ 0.66
CACNB3-222ENST00000552465 ECHDC2Q86YB7 292 aa19.19■□□□□ 0.66
CACNB3-222ENST00000552465 ABI1Q8IZP0 508 aa19.19■□□□□ 0.66
CACNB3-222ENST00000552465 V9GY48 417 aaPredicted RBP19.19■□□□□ 0.66
CACNB3-222ENST00000552465 CNTNAP5Q8WYK1 1306 aa19.19■□□□□ 0.66
CACNB3-222ENST00000552465 ZFHX2Q9C0A1 2572 aaPredicted RBP19.18■□□□□ 0.66
CACNB3-222ENST00000552465 IPO5O00410 1097 aaKnown RBP19.18■□□□□ 0.66
CACNB3-222ENST00000552465 NBL1P41271 181 aa19.18■□□□□ 0.66
CACNB3-222ENST00000552465 NLRP11P59045 1033 aaKnown RBP19.18■□□□□ 0.66
CACNB3-222ENST00000552465 FUT2Q10981 343 aa19.18■□□□□ 0.66
CACNB3-222ENST00000552465 SYNE3Q6ZMZ3 975 aa19.18■□□□□ 0.66
CACNB3-222ENST00000552465 TRMT1LQ7Z2T5 733 aaKnown RBP19.18■□□□□ 0.66
CACNB3-222ENST00000552465 SLC39A11Q8N1S5 342 aa19.18■□□□□ 0.66
CACNB3-222ENST00000552465 LSG1Q9H089 658 aaKnown RBP19.18■□□□□ 0.66
CACNB3-222ENST00000552465 ADAMTS10Q9H324 1103 aa19.18■□□□□ 0.66
CACNB3-222ENST00000552465 SMOC2Q9H3U7 446 aa19.18■□□□□ 0.66
CACNB3-222ENST00000552465 RBM28Q9NW13 759 aaKnown RBP19.18■□□□□ 0.66
CACNB3-222ENST00000552465 IGLV3-22A0A075B6J6 115 aa19.17■□□□□ 0.66
CACNB3-222ENST00000552465 MAGEB2O15479 319 aa19.17■□□□□ 0.66
CACNB3-222ENST00000552465 MTHFRP42898 656 aa19.17■□□□□ 0.66
CACNB3-222ENST00000552465 CLCN3P51790 818 aa19.17■□□□□ 0.66
CACNB3-222ENST00000552465 CLLU1OSQ5K130 101 aa19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms