RNA–Protein interactions for RNA: ENST00000551981.5

CHMP1A-210, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-210ENST00000551981 RASGRP4Q8TDF6 673 aa16.13■□□□□ 0.17
CHMP1A-210ENST00000551981 MRPS27Q92552 414 aaKnown RBP16.13■□□□□ 0.17
CHMP1A-210ENST00000551981 OSMRQ99650 979 aa16.13■□□□□ 0.17
CHMP1A-210ENST00000551981 TCF25Q9BQ70 676 aa16.13■□□□□ 0.17
CHMP1A-210ENST00000551981 LRRC2Q9BYS8 371 aa16.13■□□□□ 0.17
CHMP1A-210ENST00000551981 NGRNQ9NPE2 291 aaKnown RBP16.13■□□□□ 0.17
CHMP1A-210ENST00000551981 CNTNAP5Q8WYK1 1306 aa16.13■□□□□ 0.17
CHMP1A-210ENST00000551981 SMCO2A6NFE2 343 aa16.12■□□□□ 0.17
CHMP1A-210ENST00000551981 FGFR1P11362 822 aa16.12■□□□□ 0.17
CHMP1A-210ENST00000551981 HOXB8P17481 243 aaPredicted RBP16.12■□□□□ 0.17
CHMP1A-210ENST00000551981 FAM189BP81408 668 aa16.12■□□□□ 0.17
CHMP1A-210ENST00000551981 KRT17Q04695 432 aa16.12■□□□□ 0.17
CHMP1A-210ENST00000551981 CREB3L3Q68CJ9 461 aa16.12■□□□□ 0.17
CHMP1A-210ENST00000551981 TYW1BQ6NUM6 668 aa16.12■□□□□ 0.17
CHMP1A-210ENST00000551981 SWSAP1Q6NVH7 229 aa16.12■□□□□ 0.17
CHMP1A-210ENST00000551981 FAM228AQ86W67 206 aa16.12■□□□□ 0.17
CHMP1A-210ENST00000551981 ABI1Q8IZP0 508 aa16.12■□□□□ 0.17
CHMP1A-210ENST00000551981 METTL13Q8N6R0 699 aa16.12■□□□□ 0.17
CHMP1A-210ENST00000551981 ASIC4Q96FT7 647 aa16.12■□□□□ 0.17
CHMP1A-210ENST00000551981 LSG1Q9H089 658 aaKnown RBP16.12■□□□□ 0.17
CHMP1A-210ENST00000551981 TMEM117Q9H0C3 514 aa16.12■□□□□ 0.17
CHMP1A-210ENST00000551981 CWH43Q9H720 699 aa16.12■□□□□ 0.17
CHMP1A-210ENST00000551981 HCSTQ9UBK5 93 aa16.12■□□□□ 0.17
CHMP1A-210ENST00000551981 TCEAL9Q9UHQ7 104 aa16.12■□□□□ 0.17
CHMP1A-210ENST00000551981 NR2E1Q9Y466 385 aa16.12■□□□□ 0.17
CHMP1A-210ENST00000551981 MYO15AQ9UKN7 3530 aa16.11■□□□□ 0.17
CHMP1A-210ENST00000551981 ZBTB42B2RXF5 422 aa16.11■□□□□ 0.17
CHMP1A-210ENST00000551981 C22orf31O95567 290 aa16.11■□□□□ 0.17
CHMP1A-210ENST00000551981 AVPR2P30518 371 aa16.11■□□□□ 0.17
CHMP1A-210ENST00000551981 NUBP1P53384 320 aa16.11■□□□□ 0.17
CHMP1A-210ENST00000551981 APOBRQ0VD83 1088 aa16.11■□□□□ 0.17
CHMP1A-210ENST00000551981 RTN1Q16799 776 aa16.11■□□□□ 0.17
CHMP1A-210ENST00000551981 LLGL2Q6P1M3 1020 aa16.11■□□□□ 0.17
CHMP1A-210ENST00000551981 APOA5Q6Q788 366 aa16.11■□□□□ 0.17
CHMP1A-210ENST00000551981 PLA2G4DQ86XP0 818 aa16.11■□□□□ 0.17
CHMP1A-210ENST00000551981 LRRC43Q8N309 656 aa16.11■□□□□ 0.17
CHMP1A-210ENST00000551981 BBXQ8WY36 941 aaPredicted RBP16.11■□□□□ 0.17
CHMP1A-210ENST00000551981 ATOH1Q92858 354 aaPredicted RBP16.11■□□□□ 0.17
CHMP1A-210ENST00000551981 ZNF558Q96NG5 402 aa16.11■□□□□ 0.17
CHMP1A-210ENST00000551981 PPP1R16BQ96T49 567 aa16.11■□□□□ 0.17
CHMP1A-210ENST00000551981 S1PR5Q9H228 398 aa16.11■□□□□ 0.17
CHMP1A-210ENST00000551981 TBC1D22BQ9NU19 505 aa16.11■□□□□ 0.17
CHMP1A-210ENST00000551981 BARHL2Q9NY43 387 aa16.11■□□□□ 0.17
CHMP1A-210ENST00000551981 CEP131Q9UPN4 1083 aa16.11■□□□□ 0.17
CHMP1A-210ENST00000551981 CFAP54Q96N23 3096 aa16.11■□□□□ 0.17
CHMP1A-210ENST00000551981 IPO5O00410 1097 aaKnown RBP16.1■□□□□ 0.17
CHMP1A-210ENST00000551981 ZBTB43O43298 467 aa16.1■□□□□ 0.17
CHMP1A-210ENST00000551981 GFRA3O60609 400 aa16.1■□□□□ 0.17
CHMP1A-210ENST00000551981 ZSCAN20P17040 1043 aaPredicted RBP16.1■□□□□ 0.17
CHMP1A-210ENST00000551981 CLK2P49760 499 aaKnown RBP16.1■□□□□ 0.17
CHMP1A-210ENST00000551981 VCPP55072 806 aaKnown RBP16.1■□□□□ 0.17
CHMP1A-210ENST00000551981 KCNC3Q14003 757 aa16.1■□□□□ 0.17
CHMP1A-210ENST00000551981 COL9A3Q14050 684 aaPredicted RBP16.1■□□□□ 0.17
CHMP1A-210ENST00000551981 DSC3Q14574 896 aa16.1■□□□□ 0.17
CHMP1A-210ENST00000551981 TPRNQ4KMQ1 711 aa16.1■□□□□ 0.17
CHMP1A-210ENST00000551981 KCNT2Q6UVM3 1135 aa16.1■□□□□ 0.17
CHMP1A-210ENST00000551981 SMAP1Q8IYB5 467 aaPredicted RBP16.1■□□□□ 0.17
CHMP1A-210ENST00000551981 ZNF710Q8N1W2 664 aa16.1■□□□□ 0.17
CHMP1A-210ENST00000551981 CASP10Q92851 521 aa16.1■□□□□ 0.17
CHMP1A-210ENST00000551981 SNX27Q96L92 541 aa16.1■□□□□ 0.17
CHMP1A-210ENST00000551981 YTHDC1Q96MU7 727 aaKnown RBP16.1■□□□□ 0.17
CHMP1A-210ENST00000551981 NECTIN4Q96NY8 510 aa16.1■□□□□ 0.17
CHMP1A-210ENST00000551981 MAP7D2Q96T17 732 aa16.1■□□□□ 0.17
CHMP1A-210ENST00000551981 V9GY48 417 aaPredicted RBP16.1■□□□□ 0.17
CHMP1A-210ENST00000551981 HIDE1A8MVS5 230 aa16.09■□□□□ 0.17
CHMP1A-210ENST00000551981 FAM86B1E9PN63 330 aa16.09■□□□□ 0.17
CHMP1A-210ENST00000551981 MAGEB2O15479 319 aa16.09■□□□□ 0.17
CHMP1A-210ENST00000551981 DHX15O43143 795 aaKnown RBP16.09■□□□□ 0.17
CHMP1A-210ENST00000551981 GPR32O75388 356 aa16.09■□□□□ 0.17
CHMP1A-210ENST00000551981 VTNP04004 478 aa16.09■□□□□ 0.17
CHMP1A-210ENST00000551981 FAM86B2P0C5J1 330 aa16.09■□□□□ 0.17
CHMP1A-210ENST00000551981 TMOD1P28289 359 aa16.09■□□□□ 0.17
CHMP1A-210ENST00000551981 SETQ01105 290 aaPredicted RBP16.09■□□□□ 0.17
CHMP1A-210ENST00000551981 NECTIN1Q15223 517 aa16.09■□□□□ 0.17
CHMP1A-210ENST00000551981 RNF20Q5VTR2 975 aa16.09■□□□□ 0.17
CHMP1A-210ENST00000551981 CES5AQ6NT32 575 aa16.09■□□□□ 0.17
CHMP1A-210ENST00000551981 ZNF746Q6NUN9 644 aaPredicted RBP16.09■□□□□ 0.17
CHMP1A-210ENST00000551981 SYCE2Q6PIF2 218 aa16.09■□□□□ 0.17
CHMP1A-210ENST00000551981 TMC7Q7Z402 723 aa16.09■□□□□ 0.17
CHMP1A-210ENST00000551981 FAM167AQ96KS9 214 aa16.09■□□□□ 0.17
CHMP1A-210ENST00000551981 CASD1Q96PB1 797 aa16.09■□□□□ 0.17
CHMP1A-210ENST00000551981 ZNF577Q9BSK1 485 aa16.09■□□□□ 0.17
CHMP1A-210ENST00000551981 APOL5Q9BWW9 433 aa16.09■□□□□ 0.17
CHMP1A-210ENST00000551981 ANO2Q9NQ90 1003 aa16.09■□□□□ 0.17
CHMP1A-210ENST00000551981 TSHZ2Q9NRE2 1034 aa16.09■□□□□ 0.17
CHMP1A-210ENST00000551981 FAM86C1Q9NVL1 165 aa16.09■□□□□ 0.17
CHMP1A-210ENST00000551981 SPG21Q9NZD8 308 aa16.09■□□□□ 0.17
CHMP1A-210ENST00000551981 AKT3Q9Y243 479 aa16.09■□□□□ 0.17
CHMP1A-210ENST00000551981 MAFBQ9Y5Q3 323 aaPredicted RBP16.09■□□□□ 0.17
CHMP1A-210ENST00000551981 PSAPP07602 524 aa16.08■□□□□ 0.16
CHMP1A-210ENST00000551981 CYP3A4P08684 503 aa16.08■□□□□ 0.16
CHMP1A-210ENST00000551981 ATP4AP20648 1035 aa16.08■□□□□ 0.16
CHMP1A-210ENST00000551981 SP100P23497 879 aaPredicted RBP16.08■□□□□ 0.16
CHMP1A-210ENST00000551981 ITIH3Q06033 890 aa16.08■□□□□ 0.16
CHMP1A-210ENST00000551981 FUT2Q10981 343 aa16.08■□□□□ 0.16
CHMP1A-210ENST00000551981 MTMR3Q13615 1198 aa16.08■□□□□ 0.16
CHMP1A-210ENST00000551981 SMC1AQ14683 1233 aaKnown RBP16.08■□□□□ 0.16
CHMP1A-210ENST00000551981 BMS1Q14692 1282 aaKnown RBP16.08■□□□□ 0.16
CHMP1A-210ENST00000551981 JAKMIP3Q5VZ66 844 aa16.08■□□□□ 0.16
CHMP1A-210ENST00000551981 MCTP2Q6DN12 878 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms