RNA–Protein interactions for RNA: ENST00000551418.5

PRPF40B-215, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-215ENST00000551418 MICAL1Q8TDZ2 1067 aa20.3■□□□□ 0.84
PRPF40B-215ENST00000551418 GJA10Q969M2 543 aa20.3■□□□□ 0.84
PRPF40B-215ENST00000551418 LENG9Q96B70 501 aa20.3■□□□□ 0.84
PRPF40B-215ENST00000551418 CWH43Q9H720 699 aa20.3■□□□□ 0.84
PRPF40B-215ENST00000551418 RNF19AQ9NV58 838 aa20.3■□□□□ 0.84
PRPF40B-215ENST00000551418 ZNF318Q5VUA4 2279 aa20.29■□□□□ 0.84
PRPF40B-215ENST00000551418 GPR182O15218 404 aa20.29■□□□□ 0.84
PRPF40B-215ENST00000551418 PRPF3O43395 683 aaKnown RBP20.29■□□□□ 0.84
PRPF40B-215ENST00000551418 ZNF862O60290 1169 aa20.29■□□□□ 0.84
PRPF40B-215ENST00000551418 CDC45O75419 566 aa20.29■□□□□ 0.84
PRPF40B-215ENST00000551418 FGF18O76093 207 aa20.29■□□□□ 0.84
PRPF40B-215ENST00000551418 RCAN1P53805 252 aa20.29■□□□□ 0.84
PRPF40B-215ENST00000551418 KRT32Q14532 448 aa20.29■□□□□ 0.84
PRPF40B-215ENST00000551418 HERC4Q5GLZ8 1057 aaPredicted RBP20.29■□□□□ 0.84
PRPF40B-215ENST00000551418 ZNF746Q6NUN9 644 aaPredicted RBP20.29■□□□□ 0.84
PRPF40B-215ENST00000551418 LRRC55Q6ZSA7 311 aa20.29■□□□□ 0.84
PRPF40B-215ENST00000551418 REXO1Q8N1G1 1221 aaKnown RBP20.29■□□□□ 0.84
PRPF40B-215ENST00000551418 COLGALT1Q8NBJ5 622 aa20.29■□□□□ 0.84
PRPF40B-215ENST00000551418 SMRP1Q8NCR6 262 aa20.29■□□□□ 0.84
PRPF40B-215ENST00000551418 BBXQ8WY36 941 aaPredicted RBP20.29■□□□□ 0.84
PRPF40B-215ENST00000551418 JAKMIP1Q96N16 626 aaKnown RBP20.29■□□□□ 0.84
PRPF40B-215ENST00000551418 UPF3BQ9BZI7 483 aaKnown RBP20.29■□□□□ 0.84
PRPF40B-215ENST00000551418 ADAMTS10Q9H324 1103 aa20.29■□□□□ 0.84
PRPF40B-215ENST00000551418 TLE6Q9H808 572 aa20.29■□□□□ 0.84
PRPF40B-215ENST00000551418 C6orf50Q9HD87 102 aa20.29■□□□□ 0.84
PRPF40B-215ENST00000551418 C1orf112Q9NSG2 853 aa20.29■□□□□ 0.84
PRPF40B-215ENST00000551418 TBC1D22BQ9NU19 505 aa20.29■□□□□ 0.84
PRPF40B-215ENST00000551418 USP15Q9Y4E8 981 aaPredicted RBP20.29■□□□□ 0.84
PRPF40B-215ENST00000551418 SNX14Q9Y5W7 946 aa20.29■□□□□ 0.84
PRPF40B-215ENST00000551418 FGD1P98174 961 aa20.28■□□□□ 0.84
PRPF40B-215ENST00000551418 COASYQ13057 564 aa20.28■□□□□ 0.84
PRPF40B-215ENST00000551418 NTRK3Q16288 839 aa20.28■□□□□ 0.84
PRPF40B-215ENST00000551418 UGCGQ16739 394 aa20.28■□□□□ 0.84
PRPF40B-215ENST00000551418 LRRC71Q8N4P6 559 aa20.28■□□□□ 0.84
PRPF40B-215ENST00000551418 LINC01465Q8N7H1 131 aa20.28■□□□□ 0.84
PRPF40B-215ENST00000551418 FBXL18Q96ME1 805 aa20.28■□□□□ 0.84
PRPF40B-215ENST00000551418 PCDHB12Q9Y5F1 795 aa20.28■□□□□ 0.84
PRPF40B-215ENST00000551418 PCDHA10Q9Y5I2 948 aa20.28■□□□□ 0.84
PRPF40B-215ENST00000551418 PSAPP07602 524 aa20.27■□□□□ 0.84
PRPF40B-215ENST00000551418 CIITAP33076 1130 aa20.27■□□□□ 0.84
PRPF40B-215ENST00000551418 PBX3P40426 434 aa20.27■□□□□ 0.84
PRPF40B-215ENST00000551418 NLRP11P59045 1033 aaKnown RBP20.27■□□□□ 0.84
PRPF40B-215ENST00000551418 EFCAB12Q6NXP0 572 aa20.27■□□□□ 0.84
PRPF40B-215ENST00000551418 CENPQQ7L2Z9 268 aaPredicted RBP20.27■□□□□ 0.84
PRPF40B-215ENST00000551418 PPP2R3CQ969Q6 453 aa20.27■□□□□ 0.84
PRPF40B-215ENST00000551418 POP1Q99575 1024 aaKnown RBP20.27■□□□□ 0.84
PRPF40B-215ENST00000551418 ATP6V0A4Q9HBG4 840 aa20.27■□□□□ 0.84
PRPF40B-215ENST00000551418 NCOA5Q9HCD5 579 aaKnown RBP20.27■□□□□ 0.84
PRPF40B-215ENST00000551418 TLR9Q9NR96 1032 aa20.27■□□□□ 0.84
PRPF40B-215ENST00000551418 TMEM161AQ9NX61 479 aa20.27■□□□□ 0.84
PRPF40B-215ENST00000551418 VPS54Q9P1Q0 977 aa20.27■□□□□ 0.84
PRPF40B-215ENST00000551418 PIEZO1Q92508 2521 aa20.26■□□□□ 0.83
PRPF40B-215ENST00000551418 WDFY4Q6ZS81 3184 aa20.26■□□□□ 0.83
PRPF40B-215ENST00000551418 LOC730098B7Z3J9 87 aa20.26■□□□□ 0.83
PRPF40B-215ENST00000551418 FSCN2O14926 492 aa20.26■□□□□ 0.83
PRPF40B-215ENST00000551418 MSH4O15457 936 aa20.26■□□□□ 0.83
PRPF40B-215ENST00000551418 HMGB1P09429 215 aaKnown RBP20.26■□□□□ 0.83
PRPF40B-215ENST00000551418 FGFR4P22455 802 aa20.26■□□□□ 0.83
PRPF40B-215ENST00000551418 THNSL1Q8IYQ7 743 aa20.26■□□□□ 0.83
PRPF40B-215ENST00000551418 CASD1Q96PB1 797 aa20.26■□□□□ 0.83
PRPF40B-215ENST00000551418 SAMM50Q9Y512 469 aa20.26■□□□□ 0.83
PRPF40B-215ENST00000551418 NID2Q14112 1375 aa20.25■□□□□ 0.83
PRPF40B-215ENST00000551418 CCDC196A0A1B0GTZ2 297 aa20.25■□□□□ 0.83
PRPF40B-215ENST00000551418 CSDE1O75534 798 aaKnown RBP20.25■□□□□ 0.83
PRPF40B-215ENST00000551418 HSPA4P34932 840 aa20.25■□□□□ 0.83
PRPF40B-215ENST00000551418 CCT2P78371 535 aaKnown RBP20.25■□□□□ 0.83
PRPF40B-215ENST00000551418 SETQ01105 290 aaPredicted RBP20.25■□□□□ 0.83
PRPF40B-215ENST00000551418 DUSP6Q16828 381 aa20.25■□□□□ 0.83
PRPF40B-215ENST00000551418 BLOC1S2Q6QNY1 142 aa20.25■□□□□ 0.83
PRPF40B-215ENST00000551418 SMAP1Q8IYB5 467 aaPredicted RBP20.25■□□□□ 0.83
PRPF40B-215ENST00000551418 EDAQ92838 391 aa20.25■□□□□ 0.83
PRPF40B-215ENST00000551418 SLC26A6Q9BXS9 759 aa20.25■□□□□ 0.83
PRPF40B-215ENST00000551418 AAASQ9NRG9 546 aa20.25■□□□□ 0.83
PRPF40B-215ENST00000551418 AKT3Q9Y243 479 aa20.25■□□□□ 0.83
PRPF40B-215ENST00000551418 TMEM150BA6NC51 233 aa20.24■□□□□ 0.83
PRPF40B-215ENST00000551418 RPS6KB1P23443 525 aa20.24■□□□□ 0.83
PRPF40B-215ENST00000551418 NHLH1Q02575 133 aa20.24■□□□□ 0.83
PRPF40B-215ENST00000551418 UBE3AQ05086 875 aa20.24■□□□□ 0.83
PRPF40B-215ENST00000551418 DRP2Q13474 957 aa20.24■□□□□ 0.83
PRPF40B-215ENST00000551418 ODR4Q5SWX8 454 aa20.24■□□□□ 0.83
PRPF40B-215ENST00000551418 PLPP4Q5VZY2 271 aa20.24■□□□□ 0.83
PRPF40B-215ENST00000551418 RPGRIP1Q96KN7 1286 aa20.24■□□□□ 0.83
PRPF40B-215ENST00000551418 APOL5Q9BWW9 433 aa20.24■□□□□ 0.83
PRPF40B-215ENST00000551418 AGXT2Q9BYV1 514 aa20.24■□□□□ 0.83
PRPF40B-215ENST00000551418 UNC45AQ9H3U1 944 aa20.24■□□□□ 0.83
PRPF40B-215ENST00000551418 ELAC1Q9H777 363 aaKnown RBP20.24■□□□□ 0.83
PRPF40B-215ENST00000551418 DISC1Q9NRI5 854 aa20.24■□□□□ 0.83
PRPF40B-215ENST00000551418 HIDE1A8MVS5 230 aa20.23■□□□□ 0.83
PRPF40B-215ENST00000551418 MAGEB2O15479 319 aa20.23■□□□□ 0.83
PRPF40B-215ENST00000551418 CHMP2AO43633 222 aa20.23■□□□□ 0.83
PRPF40B-215ENST00000551418 GNA11P29992 359 aa20.23■□□□□ 0.83
PRPF40B-215ENST00000551418 PDIA3P30101 505 aaKnown RBP20.23■□□□□ 0.83
PRPF40B-215ENST00000551418 KCNC3Q14003 757 aa20.23■□□□□ 0.83
PRPF40B-215ENST00000551418 CLLU1OSQ5K130 101 aa20.23■□□□□ 0.83
PRPF40B-215ENST00000551418 ECHDC2Q86YB7 292 aa20.23■□□□□ 0.83
PRPF40B-215ENST00000551418 RNF169Q8NCN4 708 aa20.23■□□□□ 0.83
PRPF40B-215ENST00000551418 CCDC12Q8WUD4 166 aaPredicted RBP20.23■□□□□ 0.83
PRPF40B-215ENST00000551418 CCDC136Q96JN2 1154 aa20.23■□□□□ 0.83
PRPF40B-215ENST00000551418 SH2D3AQ9BRG2 576 aa20.23■□□□□ 0.83
PRPF40B-215ENST00000551418 LARP6Q9BRS8 491 aaKnown RBP20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms