RNA–Protein interactions for RNA: ENST00000551063.5

PRPF40B-211, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 4

Gene PRPF40B, Length 531 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-211ENST00000551063 YBX2Q9Y2T7 364 aaKnown RBP17.26■□□□□ 0.35
PRPF40B-211ENST00000551063 PCDHB6Q9Y5E3 794 aa17.26■□□□□ 0.35
PRPF40B-211ENST00000551063 MYH9P35579 1960 aaKnown RBP17.26■□□□□ 0.35
PRPF40B-211ENST00000551063 TMEM150BA6NC51 233 aa17.25■□□□□ 0.35
PRPF40B-211ENST00000551063 GJB5O95377 273 aa17.25■□□□□ 0.35
PRPF40B-211ENST00000551063 FXR2P51116 673 aaKnown RBP eCLIP17.25■□□□□ 0.35
PRPF40B-211ENST00000551063 RABGGTBP53611 331 aa17.25■□□□□ 0.35
PRPF40B-211ENST00000551063 CRYBB1P53674 252 aaPredicted RBP17.25■□□□□ 0.35
PRPF40B-211ENST00000551063 PAK2Q13177 524 aa17.25■□□□□ 0.35
PRPF40B-211ENST00000551063 CTTNQ14247 550 aaKnown RBP17.25■□□□□ 0.35
PRPF40B-211ENST00000551063 ODR4Q5SWX8 454 aa17.25■□□□□ 0.35
PRPF40B-211ENST00000551063 PLA2G4FQ68DD2 849 aa17.25■□□□□ 0.35
PRPF40B-211ENST00000551063 HSCBQ8IWL3 235 aa17.25■□□□□ 0.35
PRPF40B-211ENST00000551063 TPH2Q8IWU9 490 aa17.25■□□□□ 0.35
PRPF40B-211ENST00000551063 EXOC8Q8IYI6 725 aa17.25■□□□□ 0.35
PRPF40B-211ENST00000551063 C4orf32Q8N8J7 132 aa17.25■□□□□ 0.35
PRPF40B-211ENST00000551063 ERMNQ8TAM6 284 aa17.25■□□□□ 0.35
PRPF40B-211ENST00000551063 FTHL17Q9BXU8 183 aa17.25■□□□□ 0.35
PRPF40B-211ENST00000551063 AKT3Q9Y243 479 aa17.25■□□□□ 0.35
PRPF40B-211ENST00000551063 GPR32O75388 356 aa17.24■□□□□ 0.35
PRPF40B-211ENST00000551063 VTNP04004 478 aa17.24■□□□□ 0.35
PRPF40B-211ENST00000551063 CD52P31358 61 aa17.24■□□□□ 0.35
PRPF40B-211ENST00000551063 RFC5P40937 340 aa17.24■□□□□ 0.35
PRPF40B-211ENST00000551063 PRPHP41219 470 aa17.24■□□□□ 0.35
PRPF40B-211ENST00000551063 CDC42EP1Q00587 391 aa17.24■□□□□ 0.35
PRPF40B-211ENST00000551063 PTGDRQ13258 359 aa17.24■□□□□ 0.35
PRPF40B-211ENST00000551063 KIZQ2M2Z5 673 aa17.24■□□□□ 0.35
PRPF40B-211ENST00000551063 HAUS3Q68CZ6 603 aa17.24■□□□□ 0.35
PRPF40B-211ENST00000551063 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.24■□□□□ 0.35
PRPF40B-211ENST00000551063 BRAPQ7Z569 592 aa17.24■□□□□ 0.35
PRPF40B-211ENST00000551063 MYOCDQ8IZQ8 938 aa17.24■□□□□ 0.35
PRPF40B-211ENST00000551063 SLC7A3Q8WY07 619 aa17.24■□□□□ 0.35
PRPF40B-211ENST00000551063 CEP170P1Q96L14 293 aa17.24■□□□□ 0.35
PRPF40B-211ENST00000551063 RAB34Q9BZG1 259 aa17.24■□□□□ 0.35
PRPF40B-211ENST00000551063 NKX2-4Q9H2Z4 354 aa17.24■□□□□ 0.35
PRPF40B-211ENST00000551063 SUGCTQ9HAC7 445 aa17.24■□□□□ 0.35
PRPF40B-211ENST00000551063 SLC28A3Q9HAS3 691 aa17.24■□□□□ 0.35
PRPF40B-211ENST00000551063 TUFT1Q9NNX1 390 aa17.24■□□□□ 0.35
PRPF40B-211ENST00000551063 GINS2Q9Y248 185 aa17.24■□□□□ 0.35
PRPF40B-211ENST00000551063 CUL9Q8IWT3 2517 aa17.23■□□□□ 0.35
PRPF40B-211ENST00000551063 A0A0C4DFX4 3053 aa17.23■□□□□ 0.35
PRPF40B-211ENST00000551063 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.23■□□□□ 0.35
PRPF40B-211ENST00000551063 TLL1O43897 1013 aa17.23■□□□□ 0.35
PRPF40B-211ENST00000551063 GAS2O43903 313 aaKnown RBP17.23■□□□□ 0.35
PRPF40B-211ENST00000551063 RPS6KA5O75582 802 aa17.23■□□□□ 0.35
PRPF40B-211ENST00000551063 TECP42680 631 aa17.23■□□□□ 0.35
PRPF40B-211ENST00000551063 DNM2P50570 870 aa17.23■□□□□ 0.35
PRPF40B-211ENST00000551063 GPC3P51654 580 aa17.23■□□□□ 0.35
PRPF40B-211ENST00000551063 POLGP54098 1239 aaPredicted RBP17.23■□□□□ 0.35
PRPF40B-211ENST00000551063 NPEPPSP55786 919 aa17.23■□□□□ 0.35
PRPF40B-211ENST00000551063 TMEM40Q8WWA1 233 aa17.23■□□□□ 0.35
PRPF40B-211ENST00000551063 OSMRQ99650 979 aa17.23■□□□□ 0.35
PRPF40B-211ENST00000551063 SH2D3AQ9BRG2 576 aa17.23■□□□□ 0.35
PRPF40B-211ENST00000551063 POLR3CQ9BUI4 534 aaPredicted RBP17.23■□□□□ 0.35
PRPF40B-211ENST00000551063 ADAMTS10Q9H324 1103 aa17.23■□□□□ 0.35
PRPF40B-211ENST00000551063 DHX33Q9H6R0 707 aaKnown RBP17.23■□□□□ 0.35
PRPF40B-211ENST00000551063 ANKEF1Q9NU02 776 aa17.23■□□□□ 0.35
PRPF40B-211ENST00000551063 PADI3Q9ULW8 664 aa17.23■□□□□ 0.35
PRPF40B-211ENST00000551063 STK24Q9Y6E0 443 aa17.23■□□□□ 0.35
PRPF40B-211ENST00000551063 VPS37CA5D8V6 355 aaPredicted RBP17.22■□□□□ 0.35
PRPF40B-211ENST00000551063 GPR182O15218 404 aa17.22■□□□□ 0.35
PRPF40B-211ENST00000551063 CA3P07451 260 aa17.22■□□□□ 0.35
PRPF40B-211ENST00000551063 SPATA31C1P0DKV0 1188 aa17.22■□□□□ 0.35
PRPF40B-211ENST00000551063 XRCC6P12956 609 aaKnown RBP eCLIP17.22■□□□□ 0.35
PRPF40B-211ENST00000551063 MUTP22033 750 aa17.22■□□□□ 0.35
PRPF40B-211ENST00000551063 NLRP11P59045 1033 aaKnown RBP17.22■□□□□ 0.35
PRPF40B-211ENST00000551063 ATP2C1P98194 919 aaPredicted RBP17.22■□□□□ 0.35
PRPF40B-211ENST00000551063 DRP2Q13474 957 aa17.22■□□□□ 0.35
PRPF40B-211ENST00000551063 XKR9Q5GH70 373 aa17.22■□□□□ 0.35
PRPF40B-211ENST00000551063 PPP2R2DQ66LE6 453 aa17.22■□□□□ 0.35
PRPF40B-211ENST00000551063 ZNF410Q86VK4 478 aa17.22■□□□□ 0.35
PRPF40B-211ENST00000551063 SYMPKQ92797 1274 aaKnown RBP17.22■□□□□ 0.35
PRPF40B-211ENST00000551063 TOP1MTQ969P6 601 aa17.22■□□□□ 0.35
PRPF40B-211ENST00000551063 CCDC43Q96MW1 224 aaKnown RBP17.22■□□□□ 0.35
PRPF40B-211ENST00000551063 RAD9AQ99638 391 aa17.22■□□□□ 0.35
PRPF40B-211ENST00000551063 ZBED2Q9BTP6 218 aa17.22■□□□□ 0.35
PRPF40B-211ENST00000551063 PRDM12Q9H4Q4 367 aa17.22■□□□□ 0.35
PRPF40B-211ENST00000551063 CDHR5Q9HBB8 845 aa17.22■□□□□ 0.35
PRPF40B-211ENST00000551063 ERVK-5Q9HDB9 667 aa17.22■□□□□ 0.35
PRPF40B-211ENST00000551063 NOC2LQ9Y3T9 749 aaKnown RBP17.22■□□□□ 0.35
PRPF40B-211ENST00000551063 MYOGP15173 224 aa17.21■□□□□ 0.35
PRPF40B-211ENST00000551063 SYT1P21579 422 aa17.21■□□□□ 0.35
PRPF40B-211ENST00000551063 RPA1P27694 616 aa17.21■□□□□ 0.35
PRPF40B-211ENST00000551063 HTRA4P83105 476 aaPredicted RBP17.21■□□□□ 0.35
PRPF40B-211ENST00000551063 PDIA5Q14554 519 aa17.21■□□□□ 0.35
PRPF40B-211ENST00000551063 EMC2Q15006 297 aa17.21■□□□□ 0.35
PRPF40B-211ENST00000551063 FAM228AQ86W67 206 aa17.21■□□□□ 0.35
PRPF40B-211ENST00000551063 CATSPER3Q86XQ3 398 aa17.21■□□□□ 0.35
PRPF40B-211ENST00000551063 IGSF22Q8N9C0 903 aa17.21■□□□□ 0.35
PRPF40B-211ENST00000551063 LINC01599Q8WXQ3 324 aa17.21■□□□□ 0.35
PRPF40B-211ENST00000551063 SCLT1Q96NL6 688 aa17.21■□□□□ 0.35
PRPF40B-211ENST00000551063 PPP1R16BQ96T49 567 aa17.21■□□□□ 0.35
PRPF40B-211ENST00000551063 TSPYL2Q9H2G4 693 aaPredicted RBP17.21■□□□□ 0.35
PRPF40B-211ENST00000551063 SUCLA2Q9P2R7 463 aaPredicted RBP17.21■□□□□ 0.35
PRPF40B-211ENST00000551063 ST3GAL5Q9UNP4 418 aa17.21■□□□□ 0.35
PRPF40B-211ENST00000551063 SIP14410 1827 aa17.21■□□□□ 0.35
PRPF40B-211ENST00000551063 WDR81Q562E7 1941 aa17.2■□□□□ 0.34
PRPF40B-211ENST00000551063 RBAK-RBAKDNI3L0D1 243 aa17.2■□□□□ 0.34
PRPF40B-211ENST00000551063 ENPP3O14638 875 aa17.2■□□□□ 0.34
PRPF40B-211ENST00000551063 MED24O75448 989 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms