RNA–Protein interactions for RNA: ENST00000550828.1

ERBB3-215, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 1 (best)

Gene ERBB3, Length 266 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-215ENST00000550828 NR2E3Q9Y5X4 410 aa15.05■□□□□ -0
ERBB3-215ENST00000550828 NRCAMQ92823 1304 aa15.04■□□□□ -0
ERBB3-215ENST00000550828 IGKV6-21A0A0C4DH24 114 aa15.04■□□□□ -0
ERBB3-215ENST00000550828 NPHP3-ACAD11A0A0J9YXS1 232 aa15.04■□□□□ -0
ERBB3-215ENST00000550828 ARHGEF35A5YM69 484 aa15.04■□□□□ -0
ERBB3-215ENST00000550828 MYMKA6NI61 221 aa15.04■□□□□ -0
ERBB3-215ENST00000550828 TREHO43280 583 aa15.04■□□□□ -0
ERBB3-215ENST00000550828 USO1O60763 962 aaKnown RBP15.04■□□□□ -0
ERBB3-215ENST00000550828 PRR29P0C7W0 189 aa15.04■□□□□ -0
ERBB3-215ENST00000550828 CYP11B2P19099 503 aa15.04■□□□□ -0
ERBB3-215ENST00000550828 CASP1P29466 404 aa15.04■□□□□ -0
ERBB3-215ENST00000550828 DHX8Q14562 1220 aaKnown RBP15.04■□□□□ -0
ERBB3-215ENST00000550828 LRRC26Q2I0M4 334 aa15.04■□□□□ -0
ERBB3-215ENST00000550828 FAM47CQ5HY64 1035 aa15.04■□□□□ -0
ERBB3-215ENST00000550828 ZNF484Q5JVG2 852 aa15.04■□□□□ -0
ERBB3-215ENST00000550828 RINT1Q6NUQ1 792 aa15.04■□□□□ -0
ERBB3-215ENST00000550828 SLC39A5Q6ZMH5 540 aa15.04■□□□□ -0
ERBB3-215ENST00000550828 C1orf186Q6ZWK4 172 aa15.04■□□□□ -0
ERBB3-215ENST00000550828 SH3RF1Q7Z6J0 888 aa15.04■□□□□ -0
ERBB3-215ENST00000550828 C7orf31Q8N865 590 aa15.04■□□□□ -0
ERBB3-215ENST00000550828 DHX38Q92620 1227 aaKnown RBP15.04■□□□□ -0
ERBB3-215ENST00000550828 VTI1AQ96AJ9 217 aa15.04■□□□□ -0
ERBB3-215ENST00000550828 TRPV6Q9H1D0 765 aa15.04■□□□□ -0
ERBB3-215ENST00000550828 POLD4Q9HCU8 107 aa15.04■□□□□ -0
ERBB3-215ENST00000550828 TRMT13Q9NUP7 481 aaKnown RBP15.04■□□□□ -0
ERBB3-215ENST00000550828 KBTBD4Q9NVX7 518 aa15.04■□□□□ -0
ERBB3-215ENST00000550828 LTBP2Q14767 1821 aa15.03■□□□□ -0
ERBB3-215ENST00000550828 C17orf102A2RUQ5 167 aa15.03■□□□□ -0
ERBB3-215ENST00000550828 B4GALT4O60513 344 aa15.03■□□□□ -0
ERBB3-215ENST00000550828 SSBP05455 408 aaKnown RBP eCLIP15.03■□□□□ -0
ERBB3-215ENST00000550828 SLFN14P0C7P3 912 aa15.03■□□□□ -0
ERBB3-215ENST00000550828 CAPN2P17655 700 aa15.03■□□□□ -0
ERBB3-215ENST00000550828 KLRC1P26715 233 aa15.03■□□□□ -0
ERBB3-215ENST00000550828 MAPK7Q13164 816 aa15.03■□□□□ -0
ERBB3-215ENST00000550828 TRIM60Q495X7 471 aa15.03■□□□□ -0
ERBB3-215ENST00000550828 PADI6Q6TGC4 694 aa15.03■□□□□ -0
ERBB3-215ENST00000550828 MTHFD1LQ6UB35 978 aa15.03■□□□□ -0
ERBB3-215ENST00000550828 KRBA2Q6ZNG9 492 aa15.03■□□□□ -0
ERBB3-215ENST00000550828 OTUD6AQ7L8S5 288 aa15.03■□□□□ -0
ERBB3-215ENST00000550828 NECAB2Q7Z6G3 386 aa15.03■□□□□ -0
ERBB3-215ENST00000550828 GPBP1Q86WP2 473 aa15.03■□□□□ -0
ERBB3-215ENST00000550828 FAM126BQ8IXS8 530 aa15.03■□□□□ -0
ERBB3-215ENST00000550828 DAW1Q8N136 415 aa15.03■□□□□ -0
ERBB3-215ENST00000550828 LRRC71Q8N4P6 559 aa15.03■□□□□ -0
ERBB3-215ENST00000550828 IQUBQ8NA54 791 aa15.03■□□□□ -0
ERBB3-215ENST00000550828 TET1Q8NFU7 2136 aa15.03■□□□□ -0
ERBB3-215ENST00000550828 PRO3102Q9H379 93 aa15.03■□□□□ -0
ERBB3-215ENST00000550828 GPRC5CQ9NQ84 441 aa15.03■□□□□ -0
ERBB3-215ENST00000550828 DACT1Q9NYF0 836 aa15.03■□□□□ -0
ERBB3-215ENST00000550828 TUBE1Q9UJT0 475 aa15.03■□□□□ -0
ERBB3-215ENST00000550828 RRN3P2A6NIE6 340 aa15.02■□□□□ -0
ERBB3-215ENST00000550828 RSPH10B2B2RC85 870 aa15.02■□□□□ -0
ERBB3-215ENST00000550828 MAFO75444 373 aaPredicted RBP15.02■□□□□ -0
ERBB3-215ENST00000550828 CD4P01730 458 aa15.02■□□□□ -0
ERBB3-215ENST00000550828 RSPH10BP0C881 870 aa15.02■□□□□ -0
ERBB3-215ENST00000550828 CLCN3P51790 818 aa15.02■□□□□ -0
ERBB3-215ENST00000550828 CACNB1Q02641 598 aaPredicted RBP15.02■□□□□ -0
ERBB3-215ENST00000550828 PTPN11Q06124 597 aaPredicted RBP15.02■□□□□ -0
ERBB3-215ENST00000550828 EMC2Q15006 297 aa15.02■□□□□ -0
ERBB3-215ENST00000550828 TRIM71Q2Q1W2 868 aaKnown RBP15.02■□□□□ -0
ERBB3-215ENST00000550828 KCTD17Q8N5Z5 321 aa15.02■□□□□ -0
ERBB3-215ENST00000550828 DNAJC19Q96DA6 116 aa15.02■□□□□ -0
ERBB3-215ENST00000550828 PAGE5Q96GU1 130 aa15.02■□□□□ -0
ERBB3-215ENST00000550828 CUEDC2Q9H467 287 aa15.02■□□□□ -0
ERBB3-215ENST00000550828 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.01□□□□□ -0.01
ERBB3-215ENST00000550828 GOLGA6L22H0YM25 854 aa15.01□□□□□ -0.01
ERBB3-215ENST00000550828 RFC5P40937 340 aa15.01□□□□□ -0.01
ERBB3-215ENST00000550828 AFMP43652 599 aa15.01□□□□□ -0.01
ERBB3-215ENST00000550828 RTP1P59025 263 aa15.01□□□□□ -0.01
ERBB3-215ENST00000550828 MDM2Q00987 491 aaPredicted RBP15.01□□□□□ -0.01
ERBB3-215ENST00000550828 RAD51AP2Q09MP3 1159 aa15.01□□□□□ -0.01
ERBB3-215ENST00000550828 TBC1D8BQ0IIM8 1120 aa15.01□□□□□ -0.01
ERBB3-215ENST00000550828 C1orf53Q5VUE5 145 aa15.01□□□□□ -0.01
ERBB3-215ENST00000550828 MAEAQ7L5Y9 396 aa15.01□□□□□ -0.01
ERBB3-215ENST00000550828 SERINC5Q86VE9 423 aa15.01□□□□□ -0.01
ERBB3-215ENST00000550828 BSNDQ8WZ55 320 aa15.01□□□□□ -0.01
ERBB3-215ENST00000550828 TMEM143Q96AN5 459 aa15.01□□□□□ -0.01
ERBB3-215ENST00000550828 REEP2Q9BRK0 252 aa15.01□□□□□ -0.01
ERBB3-215ENST00000550828 TNMDQ9H2S6 317 aa15.01□□□□□ -0.01
ERBB3-215ENST00000550828 USP25Q9UHP3 1055 aa15.01□□□□□ -0.01
ERBB3-215ENST00000550828 PCDHA2Q9Y5H9 948 aa15.01□□□□□ -0.01
ERBB3-215ENST00000550828 PQBP1O60828 265 aaKnown RBP15□□□□□ -0.01
ERBB3-215ENST00000550828 HIP1RO75146 1068 aa15□□□□□ -0.01
ERBB3-215ENST00000550828 CYP2C9P11712 490 aa15□□□□□ -0.01
ERBB3-215ENST00000550828 GUCY2CP25092 1073 aa15□□□□□ -0.01
ERBB3-215ENST00000550828 POLGP54098 1239 aaPredicted RBP15□□□□□ -0.01
ERBB3-215ENST00000550828 TLE2Q04725 743 aa15□□□□□ -0.01
ERBB3-215ENST00000550828 CUL4BQ13620 913 aa15□□□□□ -0.01
ERBB3-215ENST00000550828 GIT2Q14161 759 aa15□□□□□ -0.01
ERBB3-215ENST00000550828 NFKBIBQ15653 356 aa15□□□□□ -0.01
ERBB3-215ENST00000550828 PTGISQ16647 500 aa15□□□□□ -0.01
ERBB3-215ENST00000550828 EFCAB12Q6NXP0 572 aa15□□□□□ -0.01
ERBB3-215ENST00000550828 SV2BQ7L1I2 683 aa15□□□□□ -0.01
ERBB3-215ENST00000550828 ANKRD33Q7Z3H0 272 aa15□□□□□ -0.01
ERBB3-215ENST00000550828 KIAA0319LQ8IZA0 1049 aa15□□□□□ -0.01
ERBB3-215ENST00000550828 ASAP3Q8TDY4 903 aa15□□□□□ -0.01
ERBB3-215ENST00000550828 TRIM9Q9C026 710 aa15□□□□□ -0.01
ERBB3-215ENST00000550828 BLZF1Q9H2G9 400 aa15□□□□□ -0.01
ERBB3-215ENST00000550828 ATP6V0A4Q9HBG4 840 aa15□□□□□ -0.01
ERBB3-215ENST00000550828 PPME1Q9Y570 386 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms