RNA–Protein interactions for RNA: ENST00000550483.5

CACNB3-217, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 5

Gene CACNB3, Length 730 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-217ENST00000550483 XKR9Q5GH70 373 aa13.87□□□□□ -0.19
CACNB3-217ENST00000550483 ODR4Q5SWX8 454 aa13.87□□□□□ -0.19
CACNB3-217ENST00000550483 CELF3Q5SZQ8 465 aaKnown RBP13.87□□□□□ -0.19
CACNB3-217ENST00000550483 SWSAP1Q6NVH7 229 aa13.87□□□□□ -0.19
CACNB3-217ENST00000550483 ARMCX2Q7L311 632 aa13.87□□□□□ -0.19
CACNB3-217ENST00000550483 CYFIP1Q7L576 1253 aa13.87□□□□□ -0.19
CACNB3-217ENST00000550483 APTXQ7Z2E3 356 aaKnown RBP13.87□□□□□ -0.19
CACNB3-217ENST00000550483 TMC6Q7Z403 805 aa13.87□□□□□ -0.19
CACNB3-217ENST00000550483 DPP9Q86TI2 863 aa13.87□□□□□ -0.19
CACNB3-217ENST00000550483 TMEM174Q8WUU8 243 aa13.87□□□□□ -0.19
CACNB3-217ENST00000550483 KCNN1Q92952 543 aa13.87□□□□□ -0.19
CACNB3-217ENST00000550483 KCTD10Q9H3F6 313 aa13.87□□□□□ -0.19
CACNB3-217ENST00000550483 NRBP2Q9NSY0 501 aa13.87□□□□□ -0.19
CACNB3-217ENST00000550483 EMSYQ7Z589 1322 aa13.87□□□□□ -0.19
CACNB3-217ENST00000550483 NOP56O00567 594 aaKnown RBP13.86□□□□□ -0.19
CACNB3-217ENST00000550483 SLC16A3O15427 465 aaKnown RBP13.86□□□□□ -0.19
CACNB3-217ENST00000550483 TLR2O60603 784 aa13.86□□□□□ -0.19
CACNB3-217ENST00000550483 PEX10O60683 326 aa13.86□□□□□ -0.19
CACNB3-217ENST00000550483 GCNT3O95395 438 aa13.86□□□□□ -0.19
CACNB3-217ENST00000550483 GGPS1O95749 300 aa13.86□□□□□ -0.19
CACNB3-217ENST00000550483 OATP04181 439 aa13.86□□□□□ -0.19
CACNB3-217ENST00000550483 HOXC6P09630 235 aa13.86□□□□□ -0.19
CACNB3-217ENST00000550483 MTIF2P46199 727 aaKnown RBP13.86□□□□□ -0.19
CACNB3-217ENST00000550483 PMS1P54277 932 aaKnown RBP13.86□□□□□ -0.19
CACNB3-217ENST00000550483 PRKCEQ02156 737 aa13.86□□□□□ -0.19
CACNB3-217ENST00000550483 LAMC2Q13753 1193 aa13.86□□□□□ -0.19
CACNB3-217ENST00000550483 FKBP15Q5T1M5 1219 aa13.86□□□□□ -0.19
CACNB3-217ENST00000550483 HS2ST1Q7LGA3 356 aa13.86□□□□□ -0.19
CACNB3-217ENST00000550483 PLPPR4Q7Z2D5 763 aa13.86□□□□□ -0.19
CACNB3-217ENST00000550483 ZNF720Q7Z2F6 126 aa13.86□□□□□ -0.19
CACNB3-217ENST00000550483 IFNL1Q8IU54 200 aa13.86□□□□□ -0.19
CACNB3-217ENST00000550483 DHX37Q8IY37 1157 aaKnown RBP13.86□□□□□ -0.19
CACNB3-217ENST00000550483 RETREG2Q8NC44 543 aa13.86□□□□□ -0.19
CACNB3-217ENST00000550483 ZNF296Q8WUU4 475 aaPredicted RBP13.86□□□□□ -0.19
CACNB3-217ENST00000550483 SPIRE2Q8WWL2 714 aa13.86□□□□□ -0.19
CACNB3-217ENST00000550483 SOCS4Q8WXH5 440 aa13.86□□□□□ -0.19
CACNB3-217ENST00000550483 EMID1Q96A84 441 aaPredicted RBP13.86□□□□□ -0.19
CACNB3-217ENST00000550483 CCDC51Q96ER9 411 aa13.86□□□□□ -0.19
CACNB3-217ENST00000550483 CEP170P1Q96L14 293 aa13.86□□□□□ -0.19
CACNB3-217ENST00000550483 CNOT6LQ96LI5 555 aaKnown RBP13.86□□□□□ -0.19
CACNB3-217ENST00000550483 NAP1L5Q96NT1 182 aaPredicted RBP13.86□□□□□ -0.19
CACNB3-217ENST00000550483 JPH2Q9BR39 696 aaPredicted RBP13.86□□□□□ -0.19
CACNB3-217ENST00000550483 NUP58Q9BVL2 599 aa13.86□□□□□ -0.19
CACNB3-217ENST00000550483 NIFKQ9BYG3 293 aaKnown RBP13.86□□□□□ -0.19
CACNB3-217ENST00000550483 ATP6V0A4Q9HBG4 840 aa13.86□□□□□ -0.19
CACNB3-217ENST00000550483 METTL14Q9HCE5 456 aaKnown RBP13.86□□□□□ -0.19
CACNB3-217ENST00000550483 FAM184BQ9ULE4 1060 aa13.86□□□□□ -0.19
CACNB3-217ENST00000550483 EXOC7Q9UPT5 735 aa13.86□□□□□ -0.19
CACNB3-217ENST00000550483 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.86□□□□□ -0.19
CACNB3-217ENST00000550483 CENPFP49454 3210 aa13.86□□□□□ -0.19
CACNB3-217ENST00000550483 PHLPP2Q6ZVD8 1323 aa13.86□□□□□ -0.19
CACNB3-217ENST00000550483 HTTP42858 3142 aa13.85□□□□□ -0.19
CACNB3-217ENST00000550483 USO1O60763 962 aaKnown RBP13.85□□□□□ -0.19
CACNB3-217ENST00000550483 LGR5O75473 907 aa13.85□□□□□ -0.19
CACNB3-217ENST00000550483 PTGS1P23219 599 aa13.85□□□□□ -0.19
CACNB3-217ENST00000550483 PBX1P40424 430 aa13.85□□□□□ -0.19
CACNB3-217ENST00000550483 KCNJ6P48051 423 aa13.85□□□□□ -0.19
CACNB3-217ENST00000550483 TM4SF4P48230 202 aa13.85□□□□□ -0.19
CACNB3-217ENST00000550483 STAT5BP51692 787 aa13.85□□□□□ -0.19
CACNB3-217ENST00000550483 SP2Q02086 613 aa13.85□□□□□ -0.19
CACNB3-217ENST00000550483 CACNB1Q02641 598 aaPredicted RBP13.85□□□□□ -0.19
CACNB3-217ENST00000550483 RAD51AP2Q09MP3 1159 aa13.85□□□□□ -0.19
CACNB3-217ENST00000550483 MAPK7Q13164 816 aa13.85□□□□□ -0.19
CACNB3-217ENST00000550483 PPP2R5AQ15172 486 aa13.85□□□□□ -0.19
CACNB3-217ENST00000550483 MAN2A1Q16706 1144 aa13.85□□□□□ -0.19
CACNB3-217ENST00000550483 UGCGQ16739 394 aa13.85□□□□□ -0.19
CACNB3-217ENST00000550483 CCDC62Q6P9F0 684 aa13.85□□□□□ -0.19
CACNB3-217ENST00000550483 LRRC55Q6ZSA7 311 aa13.85□□□□□ -0.19
CACNB3-217ENST00000550483 ANO5Q75V66 913 aa13.85□□□□□ -0.19
CACNB3-217ENST00000550483 PPFIBP1Q86W92 1011 aa13.85□□□□□ -0.19
CACNB3-217ENST00000550483 IRF2BP1Q8IU81 584 aa13.85□□□□□ -0.19
CACNB3-217ENST00000550483 CCDC60Q8IWA6 550 aaPredicted RBP13.85□□□□□ -0.19
CACNB3-217ENST00000550483 LRRC8AQ8IWT6 810 aa13.85□□□□□ -0.19
CACNB3-217ENST00000550483 HPS3Q969F9 1004 aa13.85□□□□□ -0.19
CACNB3-217ENST00000550483 TUBGCP2Q9BSJ2 902 aa13.85□□□□□ -0.19
CACNB3-217ENST00000550483 MKNK1Q9BUB5 465 aa13.85□□□□□ -0.19
CACNB3-217ENST00000550483 ABHD16BQ9H3Z7 469 aa13.85□□□□□ -0.19
CACNB3-217ENST00000550483 CYP26B1Q9NR63 512 aa13.85□□□□□ -0.19
CACNB3-217ENST00000550483 RSPH10B2B2RC85 870 aa13.84□□□□□ -0.19
CACNB3-217ENST00000550483 IGF2BP3O00425 579 aaKnown RBP eCLIP13.84□□□□□ -0.19
CACNB3-217ENST00000550483 ZNF862O60290 1169 aa13.84□□□□□ -0.19
CACNB3-217ENST00000550483 ZNF500O60304 480 aaPredicted RBP13.84□□□□□ -0.19
CACNB3-217ENST00000550483 STBD1O95210 358 aa13.84□□□□□ -0.19
CACNB3-217ENST00000550483 GH1P01241 217 aa13.84□□□□□ -0.19
CACNB3-217ENST00000550483 RSPH10BP0C881 870 aa13.84□□□□□ -0.19
CACNB3-217ENST00000550483 TXNP10599 105 aaKnown RBP13.84□□□□□ -0.19
CACNB3-217ENST00000550483 TBX2Q13207 712 aaPredicted RBP13.84□□□□□ -0.19
CACNB3-217ENST00000550483 DMP1Q13316 513 aaPredicted RBP13.84□□□□□ -0.19
CACNB3-217ENST00000550483 LRRC41Q15345 812 aa13.84□□□□□ -0.19
CACNB3-217ENST00000550483 C17orf99Q6UX52 265 aa13.84□□□□□ -0.19
CACNB3-217ENST00000550483 FRMD5Q7Z6J6 570 aa13.84□□□□□ -0.19
CACNB3-217ENST00000550483 CNGA4Q8IV77 575 aa13.84□□□□□ -0.19
CACNB3-217ENST00000550483 SLC7A3Q8WY07 619 aa13.84□□□□□ -0.19
CACNB3-217ENST00000550483 BBXQ8WY36 941 aaPredicted RBP13.84□□□□□ -0.19
CACNB3-217ENST00000550483 IFT74Q96LB3 600 aa13.84□□□□□ -0.19
CACNB3-217ENST00000550483 ACCSQ96QU6 501 aa13.84□□□□□ -0.19
CACNB3-217ENST00000550483 GPR20Q99678 358 aa13.84□□□□□ -0.19
CACNB3-217ENST00000550483 NOC4LQ9BVI4 516 aaKnown RBP13.84□□□□□ -0.19
CACNB3-217ENST00000550483 STRA6Q9BX79 667 aa13.84□□□□□ -0.19
CACNB3-217ENST00000550483 GBP3Q9H0R5 595 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms