RNA–Protein interactions for RNA: ENST00000550471.1

GCN1-207, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 918 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-207ENST00000550471 TRANK1O15050 2925 aa22.44■■□□□ 1.18
GCN1-207ENST00000550471 HOXA2O43364 376 aa22.44■■□□□ 1.18
GCN1-207ENST00000550471 CHMP2AO43633 222 aa22.44■■□□□ 1.18
GCN1-207ENST00000550471 TDP2O95551 362 aa22.44■■□□□ 1.18
GCN1-207ENST00000550471 INF2Q27J81 1249 aa22.44■■□□□ 1.18
GCN1-207ENST00000550471 RTN4RL1Q86UN2 441 aaPredicted RBP22.44■■□□□ 1.18
GCN1-207ENST00000550471 LINC01465Q8N7H1 131 aa22.44■■□□□ 1.18
GCN1-207ENST00000550471 BANK1Q8NDB2 785 aa22.44■■□□□ 1.18
GCN1-207ENST00000550471 AAASQ9NRG9 546 aa22.44■■□□□ 1.18
GCN1-207ENST00000550471 ST3GAL5Q9UNP4 418 aa22.44■■□□□ 1.18
GCN1-207ENST00000550471 NOC2LQ9Y3T9 749 aaKnown RBP22.44■■□□□ 1.18
GCN1-207ENST00000550471 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP22.43■■□□□ 1.18
GCN1-207ENST00000550471 ZNF862O60290 1169 aa22.43■■□□□ 1.18
GCN1-207ENST00000550471 GPR32O75388 356 aa22.43■■□□□ 1.18
GCN1-207ENST00000550471 BAG4O95429 457 aaKnown RBP22.43■■□□□ 1.18
GCN1-207ENST00000550471 ZSCAN20P17040 1043 aaPredicted RBP22.43■■□□□ 1.18
GCN1-207ENST00000550471 PSMC5P62195 406 aa22.43■■□□□ 1.18
GCN1-207ENST00000550471 PPP2R5CQ13362 524 aa22.43■■□□□ 1.18
GCN1-207ENST00000550471 CSPP1Q1MSJ5 1256 aa22.43■■□□□ 1.18
GCN1-207ENST00000550471 LETM2Q2VYF4 491 aa22.43■■□□□ 1.18
GCN1-207ENST00000550471 SLFN12Q8IYM2 578 aa22.43■■□□□ 1.18
GCN1-207ENST00000550471 LINC01599Q8WXQ3 324 aa22.43■■□□□ 1.18
GCN1-207ENST00000550471 GTF3C6Q969F1 213 aa22.43■■□□□ 1.18
GCN1-207ENST00000550471 AIFM3Q96NN9 605 aa22.43■■□□□ 1.18
GCN1-207ENST00000550471 UIMC1Q96RL1 719 aa22.43■■□□□ 1.18
GCN1-207ENST00000550471 UBE2ZQ9H832 354 aaPredicted RBP22.43■■□□□ 1.18
GCN1-207ENST00000550471 KCNJ14Q9UNX9 436 aa22.43■■□□□ 1.18
GCN1-207ENST00000550471 FAM50BQ9Y247 325 aa22.43■■□□□ 1.18
GCN1-207ENST00000550471 MARCH6O60337 910 aa22.42■■□□□ 1.18
GCN1-207ENST00000550471 EIF4BP23588 611 aaKnown RBP22.42■■□□□ 1.18
GCN1-207ENST00000550471 TFF2Q03403 129 aa22.42■■□□□ 1.18
GCN1-207ENST00000550471 TRIM29Q14134 588 aa22.42■■□□□ 1.18
GCN1-207ENST00000550471 TARBP2Q15633 366 aaKnown RBP22.42■■□□□ 1.18
GCN1-207ENST00000550471 KIZQ2M2Z5 673 aa22.42■■□□□ 1.18
GCN1-207ENST00000550471 OSMRQ99650 979 aa22.42■■□□□ 1.18
GCN1-207ENST00000550471 ADAM2Q99965 735 aa22.42■■□□□ 1.18
GCN1-207ENST00000550471 INO80BQ9C086 356 aaPredicted RBP22.42■■□□□ 1.18
GCN1-207ENST00000550471 TMX1Q9H3N1 280 aa22.42■■□□□ 1.18
GCN1-207ENST00000550471 TMEM161AQ9NX61 479 aa22.42■■□□□ 1.18
GCN1-207ENST00000550471 PRUNE2Q8WUY3 3088 aa22.42■■□□□ 1.18
GCN1-207ENST00000550471 EYSQ5T1H1 3165 aa22.42■■□□□ 1.18
GCN1-207ENST00000550471 KRT2P35908 639 aa22.41■■□□□ 1.18
GCN1-207ENST00000550471 NEK4P51957 841 aa22.41■■□□□ 1.18
GCN1-207ENST00000550471 NLRP11P59045 1033 aaKnown RBP22.41■■□□□ 1.18
GCN1-207ENST00000550471 LEXMQ3ZCV2 418 aa22.41■■□□□ 1.18
GCN1-207ENST00000550471 KCNMB3Q9NPA1 279 aa22.41■■□□□ 1.18
GCN1-207ENST00000550471 NCOR1O75376 2440 aa22.4■■□□□ 1.18
GCN1-207ENST00000550471 FSD2A1L4K1 749 aa22.4■■□□□ 1.18
GCN1-207ENST00000550471 CARNS1A5YM72 827 aa22.4■■□□□ 1.18
GCN1-207ENST00000550471 C9IYK1 514 aa22.4■■□□□ 1.18
GCN1-207ENST00000550471 MMP1P03956 469 aa22.4■■□□□ 1.18
GCN1-207ENST00000550471 VTNP04004 478 aa22.4■■□□□ 1.18
GCN1-207ENST00000550471 P4HBP07237 508 aaKnown RBP22.4■■□□□ 1.18
GCN1-207ENST00000550471 LINC00271P0C7V0 271 aa22.4■■□□□ 1.18
GCN1-207ENST00000550471 QARSP47897 775 aaKnown RBP22.4■■□□□ 1.18
GCN1-207ENST00000550471 CLCN3P51790 818 aa22.4■■□□□ 1.18
GCN1-207ENST00000550471 FAM189BP81408 668 aa22.4■■□□□ 1.18
GCN1-207ENST00000550471 TMEM266Q2M3C6 531 aa22.4■■□□□ 1.18
GCN1-207ENST00000550471 PIK3AP1Q6ZUJ8 805 aa22.4■■□□□ 1.18
GCN1-207ENST00000550471 TRMT1LQ7Z2T5 733 aaKnown RBP22.4■■□□□ 1.18
GCN1-207ENST00000550471 FAM228AQ86W67 206 aa22.4■■□□□ 1.18
GCN1-207ENST00000550471 TMEM40Q8WWA1 233 aa22.4■■□□□ 1.18
GCN1-207ENST00000550471 PABPC5Q96DU9 382 aaKnown RBP22.4■■□□□ 1.18
GCN1-207ENST00000550471 SCLT1Q96NL6 688 aa22.4■■□□□ 1.18
GCN1-207ENST00000550471 ADAMTS10Q9H324 1103 aa22.4■■□□□ 1.18
GCN1-207ENST00000550471 CDHR5Q9HBB8 845 aa22.4■■□□□ 1.18
GCN1-207ENST00000550471 ATP6V0A4Q9HBG4 840 aa22.4■■□□□ 1.18
GCN1-207ENST00000550471 DACT1Q9NYF0 836 aa22.4■■□□□ 1.18
GCN1-207ENST00000550471 SEPT9Q9UHD8 586 aaPredicted RBP22.4■■□□□ 1.18
GCN1-207ENST00000550471 PCDHB12Q9Y5F1 795 aa22.4■■□□□ 1.18
GCN1-207ENST00000550471 CCNT1O60563 726 aaKnown RBP22.39■■□□□ 1.17
GCN1-207ENST00000550471 GPC3P51654 580 aa22.39■■□□□ 1.17
GCN1-207ENST00000550471 UBE3AQ05086 875 aa22.39■■□□□ 1.17
GCN1-207ENST00000550471 COL19A1Q14993 1142 aa22.39■■□□□ 1.17
GCN1-207ENST00000550471 ZNF410Q86VK4 478 aa22.39■■□□□ 1.17
GCN1-207ENST00000550471 GCOM2Q9BZD3 368 aaPredicted RBP22.39■■□□□ 1.17
GCN1-207ENST00000550471 CHST12Q9NRB3 414 aa22.39■■□□□ 1.17
GCN1-207ENST00000550471 NLRC5Q86WI3 1866 aa22.39■■□□□ 1.17
GCN1-207ENST00000550471 EVPLQ92817 2033 aa22.38■■□□□ 1.17
GCN1-207ENST00000550471 IGKV6-21A0A0C4DH24 114 aa22.38■■□□□ 1.17
GCN1-207ENST00000550471 GAS2O43903 313 aaKnown RBP22.38■■□□□ 1.17
GCN1-207ENST00000550471 CTDNEP1O95476 244 aa22.38■■□□□ 1.17
GCN1-207ENST00000550471 DARSP14868 501 aaKnown RBP22.38■■□□□ 1.17
GCN1-207ENST00000550471 KCNQ1P51787 676 aa22.38■■□□□ 1.17
GCN1-207ENST00000550471 UGCGQ16739 394 aa22.38■■□□□ 1.17
GCN1-207ENST00000550471 ME3Q16798 604 aa22.38■■□□□ 1.17
GCN1-207ENST00000550471 OTUD6AQ7L8S5 288 aa22.38■■□□□ 1.17
GCN1-207ENST00000550471 PLAGL2Q9UPG8 496 aa22.38■■□□□ 1.17
GCN1-207ENST00000550471 MRPL42Q9Y6G3 142 aaKnown RBP22.38■■□□□ 1.17
GCN1-207ENST00000550471 DDX11L8A8MPP1 907 aa22.37■■□□□ 1.17
GCN1-207ENST00000550471 SLC37A4O43826 429 aa22.37■■□□□ 1.17
GCN1-207ENST00000550471 MAFO75444 373 aaPredicted RBP22.37■■□□□ 1.17
GCN1-207ENST00000550471 SKIP12755 728 aa22.37■■□□□ 1.17
GCN1-207ENST00000550471 SFPQP23246 707 aaKnown RBP eCLIP22.37■■□□□ 1.17
GCN1-207ENST00000550471 DSC3Q14574 896 aa22.37■■□□□ 1.17
GCN1-207ENST00000550471 EPHA7Q15375 998 aa22.37■■□□□ 1.17
GCN1-207ENST00000550471 MTERF2Q49AM1 385 aa22.37■■□□□ 1.17
GCN1-207ENST00000550471 LRRC71Q8N4P6 559 aa22.37■■□□□ 1.17
GCN1-207ENST00000550471 NLRP7Q8WX94 980 aa22.37■■□□□ 1.17
GCN1-207ENST00000550471 SLC7A3Q8WY07 619 aa22.37■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms