RNA–Protein interactions for RNA: ENST00000549526.1

SMARCD1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 5

Gene SMARCD1, Length 401 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-207ENST00000549526 TMX1Q9H3N1 280 aa9.63□□□□□ -0.87
SMARCD1-207ENST00000549526 PXMP2Q9NR77 195 aa9.63□□□□□ -0.87
SMARCD1-207ENST00000549526 SLC2A4RGQ9NR83 387 aa9.63□□□□□ -0.87
SMARCD1-207ENST00000549526 EPS15L1Q9UBC2 864 aa9.63□□□□□ -0.87
SMARCD1-207ENST00000549526 DOCK5Q9H7D0 1870 aa9.63□□□□□ -0.87
SMARCD1-207ENST00000549526 CD72P21854 359 aa9.62□□□□□ -0.87
SMARCD1-207ENST00000549526 GPC5P78333 572 aa9.62□□□□□ -0.87
SMARCD1-207ENST00000549526 TMEM62Q0P6H9 643 aa9.62□□□□□ -0.87
SMARCD1-207ENST00000549526 SIM2Q14190 667 aaPredicted RBP9.62□□□□□ -0.87
SMARCD1-207ENST00000549526 TMEM266Q2M3C6 531 aa9.62□□□□□ -0.87
SMARCD1-207ENST00000549526 ZBTB41Q5SVQ8 909 aa9.62□□□□□ -0.87
SMARCD1-207ENST00000549526 C19orf48Q6RUI8 117 aa9.62□□□□□ -0.87
SMARCD1-207ENST00000549526 C15orf39Q6ZRI6 1047 aa9.62□□□□□ -0.87
SMARCD1-207ENST00000549526 LRRC55Q6ZSA7 311 aa9.62□□□□□ -0.87
SMARCD1-207ENST00000549526 SLC24A5Q71RS6 500 aa9.62□□□□□ -0.87
SMARCD1-207ENST00000549526 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.62□□□□□ -0.87
SMARCD1-207ENST00000549526 PDZD3Q86UT5 571 aa9.62□□□□□ -0.87
SMARCD1-207ENST00000549526 C12orf50Q8NA57 414 aaPredicted RBP9.62□□□□□ -0.87
SMARCD1-207ENST00000549526 ST13P5Q8NFI4 369 aaPredicted RBP9.62□□□□□ -0.87
SMARCD1-207ENST00000549526 BBXQ8WY36 941 aaPredicted RBP9.62□□□□□ -0.87
SMARCD1-207ENST00000549526 GATA6Q92908 595 aa9.62□□□□□ -0.87
SMARCD1-207ENST00000549526 ZFP91Q96JP5 570 aaPredicted RBP9.62□□□□□ -0.87
SMARCD1-207ENST00000549526 ADAM2Q99965 735 aa9.62□□□□□ -0.87
SMARCD1-207ENST00000549526 LSM14BQ9BX40 385 aaKnown RBP9.62□□□□□ -0.87
SMARCD1-207ENST00000549526 OSBPL6Q9BZF3 934 aa9.62□□□□□ -0.87
SMARCD1-207ENST00000549526 MAF1Q9H063 256 aa9.62□□□□□ -0.87
SMARCD1-207ENST00000549526 FAM49AQ9H0Q0 323 aaPredicted RBP9.62□□□□□ -0.87
SMARCD1-207ENST00000549526 DCTPP1Q9H773 170 aa9.62□□□□□ -0.87
SMARCD1-207ENST00000549526 ATP6V0A4Q9HBG4 840 aa9.62□□□□□ -0.87
SMARCD1-207ENST00000549526 TUBE1Q9UJT0 475 aa9.62□□□□□ -0.87
SMARCD1-207ENST00000549526 PCDHB15Q9Y5E8 787 aa9.62□□□□□ -0.87
SMARCD1-207ENST00000549526 LAMA1P25391 3075 aa9.62□□□□□ -0.87
SMARCD1-207ENST00000549526 TENM4Q6N022 2769 aa9.62□□□□□ -0.87
SMARCD1-207ENST00000549526 NCAM2O15394 837 aa9.61□□□□□ -0.87
SMARCD1-207ENST00000549526 PPFIA1Q13136 1202 aa9.61□□□□□ -0.87
SMARCD1-207ENST00000549526 GIT2Q14161 759 aa9.61□□□□□ -0.87
SMARCD1-207ENST00000549526 SF3A2Q15428 464 aaKnown RBP9.61□□□□□ -0.87
SMARCD1-207ENST00000549526 SLC44A4Q53GD3 710 aa9.61□□□□□ -0.87
SMARCD1-207ENST00000549526 STPG1Q5TH74 334 aa9.61□□□□□ -0.87
SMARCD1-207ENST00000549526 PPFIBP1Q86W92 1011 aa9.61□□□□□ -0.87
SMARCD1-207ENST00000549526 VPS52Q8N1B4 723 aa9.61□□□□□ -0.87
SMARCD1-207ENST00000549526 GPKOWQ92917 476 aaPredicted RBP eCLIP9.61□□□□□ -0.87
SMARCD1-207ENST00000549526 KLHL5Q96PQ7 755 aa9.61□□□□□ -0.87
SMARCD1-207ENST00000549526 MYADMQ96S97 322 aa9.61□□□□□ -0.87
SMARCD1-207ENST00000549526 RGS18Q9NS28 235 aa9.61□□□□□ -0.87
SMARCD1-207ENST00000549526 RXFP3Q9NSD7 469 aa9.61□□□□□ -0.87
SMARCD1-207ENST00000549526 C1orf112Q9NSG2 853 aa9.61□□□□□ -0.87
SMARCD1-207ENST00000549526 TRPV2Q9Y5S1 764 aa9.61□□□□□ -0.87
SMARCD1-207ENST00000549526 COL4A3Q01955 1670 aa9.61□□□□□ -0.87
SMARCD1-207ENST00000549526 MYH6P13533 1939 aa9.6□□□□□ -0.87
SMARCD1-207ENST00000549526 MYH15Q9Y2K3 1946 aa9.6□□□□□ -0.87
SMARCD1-207ENST00000549526 ABCB11O95342 1321 aa9.6□□□□□ -0.87
SMARCD1-207ENST00000549526 IGSF9BQ9UPX0 1349 aa9.6□□□□□ -0.87
SMARCD1-207ENST00000549526 MGEA5O60502 916 aa9.6□□□□□ -0.87
SMARCD1-207ENST00000549526 TOP3BO95985 862 aaKnown RBP9.6□□□□□ -0.87
SMARCD1-207ENST00000549526 CFBP00751 764 aa9.6□□□□□ -0.87
SMARCD1-207ENST00000549526 RPLP2P05387 115 aaKnown RBP9.6□□□□□ -0.87
SMARCD1-207ENST00000549526 LAMP2P13473 410 aa9.6□□□□□ -0.87
SMARCD1-207ENST00000549526 ATP5JP18859 108 aa9.6□□□□□ -0.87
SMARCD1-207ENST00000549526 IGBP1P78318 339 aa9.6□□□□□ -0.87
SMARCD1-207ENST00000549526 PRKCQQ04759 706 aa9.6□□□□□ -0.87
SMARCD1-207ENST00000549526 PPP2R5DQ14738 602 aa9.6□□□□□ -0.87
SMARCD1-207ENST00000549526 MLF2Q15773 248 aaPredicted RBP9.6□□□□□ -0.87
SMARCD1-207ENST00000549526 CYFIP1Q7L576 1253 aa9.6□□□□□ -0.87
SMARCD1-207ENST00000549526 VSIG10LQ86VR7 867 aa9.6□□□□□ -0.87
SMARCD1-207ENST00000549526 ADAM32Q8TC27 787 aa9.6□□□□□ -0.87
SMARCD1-207ENST00000549526 GPATCH3Q96I76 525 aa9.6□□□□□ -0.87
SMARCD1-207ENST00000549526 NELL2Q99435 816 aa9.6□□□□□ -0.87
SMARCD1-207ENST00000549526 DDX23Q9BUQ8 820 aaKnown RBP9.6□□□□□ -0.87
SMARCD1-207ENST00000549526 SCNM1Q9BWG6 230 aa9.6□□□□□ -0.87
SMARCD1-207ENST00000549526 CELF4Q9BZC1 486 aaKnown RBP9.6□□□□□ -0.87
SMARCD1-207ENST00000549526 TMEM117Q9H0C3 514 aa9.6□□□□□ -0.87
SMARCD1-207ENST00000549526 EPB41L4AQ9HCS5 686 aaPredicted RBP9.6□□□□□ -0.87
SMARCD1-207ENST00000549526 WDR6Q9NNW5 1121 aaKnown RBP9.6□□□□□ -0.87
SMARCD1-207ENST00000549526 PRMT8Q9NR22 394 aaPredicted RBP9.6□□□□□ -0.87
SMARCD1-207ENST00000549526 NUMBLQ9Y6R0 609 aa9.6□□□□□ -0.87
SMARCD1-207ENST00000549526 DOCK8Q8NF50 2099 aa9.6□□□□□ -0.87
SMARCD1-207ENST00000549526 LAMA5O15230 3695 aa9.59□□□□□ -0.87
SMARCD1-207ENST00000549526 LAMA4Q16363 1823 aa9.59□□□□□ -0.87
SMARCD1-207ENST00000549526 GREB1Q4ZG55 1949 aa9.59□□□□□ -0.87
SMARCD1-207ENST00000549526 CCDC195A0A1B0GUA6 201 aa9.59□□□□□ -0.87
SMARCD1-207ENST00000549526 C9IYK1 514 aa9.59□□□□□ -0.87
SMARCD1-207ENST00000549526 NT5C1B-RDH14C9J2C7 533 aa9.59□□□□□ -0.87
SMARCD1-207ENST00000549526 PATL2C9JE40 543 aaKnown RBP9.59□□□□□ -0.87
SMARCD1-207ENST00000549526 RANBP6O60518 1105 aaKnown RBP9.59□□□□□ -0.87
SMARCD1-207ENST00000549526 KLRC2P26717 231 aa9.59□□□□□ -0.87
SMARCD1-207ENST00000549526 ALDH7A1P49419 539 aaKnown RBP9.59□□□□□ -0.87
SMARCD1-207ENST00000549526 METAP2P50579 478 aaKnown RBP eCLIP9.59□□□□□ -0.87
SMARCD1-207ENST00000549526 NOVA1P51513 510 aaKnown RBP9.59□□□□□ -0.87
SMARCD1-207ENST00000549526 SP4Q02446 784 aa9.59□□□□□ -0.87
SMARCD1-207ENST00000549526 MTAPQ13126 283 aa9.59□□□□□ -0.87
SMARCD1-207ENST00000549526 GRIK4Q16099 956 aa9.59□□□□□ -0.87
SMARCD1-207ENST00000549526 MARCH8Q5T0T0 291 aa9.59□□□□□ -0.87
SMARCD1-207ENST00000549526 IFNL3Q8IZI9 196 aa9.59□□□□□ -0.87
SMARCD1-207ENST00000549526 ABI1Q8IZP0 508 aa9.59□□□□□ -0.87
SMARCD1-207ENST00000549526 SLC39A11Q8N1S5 342 aa9.59□□□□□ -0.87
SMARCD1-207ENST00000549526 CLDN23Q96B33 292 aa9.59□□□□□ -0.87
SMARCD1-207ENST00000549526 ZBTB10Q96DT7 871 aa9.59□□□□□ -0.87
SMARCD1-207ENST00000549526 TMEM169Q96HH4 297 aa9.59□□□□□ -0.87
SMARCD1-207ENST00000549526 CASD1Q96PB1 797 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms