RNA–Protein interactions for RNA: ENST00000549271.1

DDX54-206, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 756 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-206ENST00000549271 KDM3AQ9Y4C1 1321 aa13.93□□□□□ -0.18
DDX54-206ENST00000549271 BAHCC1Q9P281 2608 aa13.93□□□□□ -0.18
DDX54-206ENST00000549271 GSTTP1A0A1W2PQM5 241 aa13.93□□□□□ -0.18
DDX54-206ENST00000549271 SH2B2O14492 632 aaPredicted RBP13.93□□□□□ -0.18
DDX54-206ENST00000549271 MGEA5O60502 916 aa13.93□□□□□ -0.18
DDX54-206ENST00000549271 CALM1P0DP23 149 aa13.93□□□□□ -0.18
DDX54-206ENST00000549271 CALM2P0DP24 149 aa13.93□□□□□ -0.18
DDX54-206ENST00000549271 CALM3P0DP25 149 aa13.93□□□□□ -0.18
DDX54-206ENST00000549271 LAG3P18627 525 aa13.93□□□□□ -0.18
DDX54-206ENST00000549271 MARK3P27448 753 aa13.93□□□□□ -0.18
DDX54-206ENST00000549271 TSGA10IPQ3SY00 556 aa13.93□□□□□ -0.18
DDX54-206ENST00000549271 CASC1Q6TDU7 716 aa13.93□□□□□ -0.18
DDX54-206ENST00000549271 TEX2Q8IWB9 1127 aa13.93□□□□□ -0.18
DDX54-206ENST00000549271 SRBD1Q8N5C6 995 aaKnown RBP13.93□□□□□ -0.18
DDX54-206ENST00000549271 CYP2W1Q8TAV3 490 aa13.93□□□□□ -0.18
DDX54-206ENST00000549271 CELF4Q9BZC1 486 aaKnown RBP13.93□□□□□ -0.18
DDX54-206ENST00000549271 PUF60Q9UHX1 559 aaKnown RBP13.93□□□□□ -0.18
DDX54-206ENST00000549271 RRN3P2A6NIE6 340 aa13.92□□□□□ -0.18
DDX54-206ENST00000549271 M0QZ92 97 aa13.92□□□□□ -0.18
DDX54-206ENST00000549271 MAFGO15525 162 aa13.92□□□□□ -0.18
DDX54-206ENST00000549271 KCNA2P16389 499 aa13.92□□□□□ -0.18
DDX54-206ENST00000549271 IGBP1P78318 339 aa13.92□□□□□ -0.18
DDX54-206ENST00000549271 TMEM62Q0P6H9 643 aa13.92□□□□□ -0.18
DDX54-206ENST00000549271 KIAA1841Q6NSI8 718 aa13.92□□□□□ -0.18
DDX54-206ENST00000549271 PIBF1Q8WXW3 757 aa13.92□□□□□ -0.18
DDX54-206ENST00000549271 MYL10Q9BUA6 226 aa13.92□□□□□ -0.18
DDX54-206ENST00000549271 LRRC2Q9BYS8 371 aa13.92□□□□□ -0.18
DDX54-206ENST00000549271 PSTPIP2Q9H939 334 aa13.92□□□□□ -0.18
DDX54-206ENST00000549271 ERVK-5Q9HDB9 667 aa13.92□□□□□ -0.18
DDX54-206ENST00000549271 RGS18Q9NS28 235 aa13.92□□□□□ -0.18
DDX54-206ENST00000549271 RNF216Q9NWF9 866 aaPredicted RBP13.92□□□□□ -0.18
DDX54-206ENST00000549271 R4GN57 208 aa13.92□□□□□ -0.18
DDX54-206ENST00000549271 USP24Q9UPU5 2620 aa13.92□□□□□ -0.18
DDX54-206ENST00000549271 CHD8Q9HCK8 2581 aa13.91□□□□□ -0.18
DDX54-206ENST00000549271 C9IYK1 514 aa13.91□□□□□ -0.18
DDX54-206ENST00000549271 ATP9AO75110 1047 aa13.91□□□□□ -0.18
DDX54-206ENST00000549271 PLEKHA8P1O95397 391 aa13.91□□□□□ -0.18
DDX54-206ENST00000549271 EOMESO95936 686 aa13.91□□□□□ -0.18
DDX54-206ENST00000549271 WEE2P0C1S8 567 aa13.91□□□□□ -0.18
DDX54-206ENST00000549271 INSRRP14616 1297 aa13.91□□□□□ -0.18
DDX54-206ENST00000549271 ITGB5P18084 799 aa13.91□□□□□ -0.18
DDX54-206ENST00000549271 EXOSC10Q01780 885 aaKnown RBP13.91□□□□□ -0.18
DDX54-206ENST00000549271 TMEM266Q2M3C6 531 aa13.91□□□□□ -0.18
DDX54-206ENST00000549271 ADCK5Q3MIX3 580 aa13.91□□□□□ -0.18
DDX54-206ENST00000549271 SLC24A5Q71RS6 500 aa13.91□□□□□ -0.18
DDX54-206ENST00000549271 MRPL43Q8N983 215 aaKnown RBP13.91□□□□□ -0.18
DDX54-206ENST00000549271 SEPT1Q8WYJ6 367 aa13.91□□□□□ -0.18
DDX54-206ENST00000549271 RUBCNQ92622 972 aa13.91□□□□□ -0.18
DDX54-206ENST00000549271 KCNB2Q92953 911 aa13.91□□□□□ -0.18
DDX54-206ENST00000549271 SMARCAD1Q9H4L7 1026 aa13.91□□□□□ -0.18
DDX54-206ENST00000549271 CYP26B1Q9NR63 512 aa13.91□□□□□ -0.18
DDX54-206ENST00000549271 C1orf112Q9NSG2 853 aa13.91□□□□□ -0.18
DDX54-206ENST00000549271 PPP4R2Q9NY27 417 aa13.91□□□□□ -0.18
DDX54-206ENST00000549271 DUSP12Q9UNI6 340 aa13.91□□□□□ -0.18
DDX54-206ENST00000549271 PCDHA2Q9Y5H9 948 aa13.91□□□□□ -0.18
DDX54-206ENST00000549271 UBIAD1Q9Y5Z9 338 aa13.91□□□□□ -0.18
DDX54-206ENST00000549271 C2orf71A6NGG8 1288 aa13.9□□□□□ -0.18
DDX54-206ENST00000549271 CCDC69A6NI79 296 aa13.9□□□□□ -0.18
DDX54-206ENST00000549271 CLASP2O75122 1294 aaKnown RBP13.9□□□□□ -0.18
DDX54-206ENST00000549271 IBSPP21815 317 aaPredicted RBP13.9□□□□□ -0.18
DDX54-206ENST00000549271 NFX1Q12986 1120 aaKnown RBP13.9□□□□□ -0.18
DDX54-206ENST00000549271 TDGQ13569 410 aa13.9□□□□□ -0.18
DDX54-206ENST00000549271 RARS2Q5T160 578 aaKnown RBP13.9□□□□□ -0.18
DDX54-206ENST00000549271 RNF20Q5VTR2 975 aa13.9□□□□□ -0.18
DDX54-206ENST00000549271 NFXL1Q6ZNB6 911 aa13.9□□□□□ -0.18
DDX54-206ENST00000549271 LRRC55Q6ZSA7 311 aa13.9□□□□□ -0.18
DDX54-206ENST00000549271 TMC7Q7Z402 723 aa13.9□□□□□ -0.18
DDX54-206ENST00000549271 SGMS1Q86VZ5 419 aa13.9□□□□□ -0.18
DDX54-206ENST00000549271 SIX5Q8N196 739 aa13.9□□□□□ -0.18
DDX54-206ENST00000549271 NME8Q8N427 588 aa13.9□□□□□ -0.18
DDX54-206ENST00000549271 GLG1Q92896 1179 aa13.9□□□□□ -0.18
DDX54-206ENST00000549271 ADAM2Q99965 735 aa13.9□□□□□ -0.18
DDX54-206ENST00000549271 DBR1Q9UK59 544 aaKnown RBP13.9□□□□□ -0.18
DDX54-206ENST00000549271 C2orf16Q68DN1 1984 aa13.9□□□□□ -0.18
DDX54-206ENST00000549271 GPR179Q6PRD1 2367 aa13.9□□□□□ -0.18
DDX54-206ENST00000549271 EVPLQ92817 2033 aa13.9□□□□□ -0.18
DDX54-206ENST00000549271 FGFR1P11362 822 aa13.89□□□□□ -0.19
DDX54-206ENST00000549271 RXRAP19793 462 aa13.89□□□□□ -0.19
DDX54-206ENST00000549271 PPM1AP35813 382 aa13.89□□□□□ -0.19
DDX54-206ENST00000549271 FAM189BP81408 668 aa13.89□□□□□ -0.19
DDX54-206ENST00000549271 KRT76Q01546 638 aa13.89□□□□□ -0.19
DDX54-206ENST00000549271 MTMR1Q13613 665 aa13.89□□□□□ -0.19
DDX54-206ENST00000549271 SMC1AQ14683 1233 aaKnown RBP13.89□□□□□ -0.19
DDX54-206ENST00000549271 RSPO4Q2I0M5 234 aaPredicted RBP13.89□□□□□ -0.19
DDX54-206ENST00000549271 ATAT1Q5SQI0 421 aa13.89□□□□□ -0.19
DDX54-206ENST00000549271 ERICH6BQ5W0A0 696 aa13.89□□□□□ -0.19
DDX54-206ENST00000549271 KCNT2Q6UVM3 1135 aa13.89□□□□□ -0.19
DDX54-206ENST00000549271 TMTC3Q6ZXV5 915 aa13.89□□□□□ -0.19
DDX54-206ENST00000549271 DCLK2Q8N568 766 aa13.89□□□□□ -0.19
DDX54-206ENST00000549271 C12orf76Q8N812 135 aaPredicted RBP13.89□□□□□ -0.19
DDX54-206ENST00000549271 FANCBQ8NB91 859 aa13.89□□□□□ -0.19
DDX54-206ENST00000549271 PCYT2Q99447 389 aa13.89□□□□□ -0.19
DDX54-206ENST00000549271 ELAC1Q9H777 363 aaKnown RBP13.89□□□□□ -0.19
DDX54-206ENST00000549271 JADE2Q9NQC1 790 aa13.89□□□□□ -0.19
DDX54-206ENST00000549271 TMEM161AQ9NX61 479 aa13.89□□□□□ -0.19
DDX54-206ENST00000549271 NOC2LQ9Y3T9 749 aaKnown RBP13.89□□□□□ -0.19
DDX54-206ENST00000549271 SLC12A7Q9Y666 1083 aa13.89□□□□□ -0.19
DDX54-206ENST00000549271 CACNA1IQ9P0X4 2223 aa13.88□□□□□ -0.19
DDX54-206ENST00000549271 SMIM35A0A1B0GVV1 85 aa13.88□□□□□ -0.19
DDX54-206ENST00000549271 DENND3A2RUS2 1198 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms