RNA–Protein interactions for RNA: ENST00000548877.1

CDX2-202, Transcript of caudal type homeobox 2, humanhuman

TSL 3

Gene CDX2, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX2-202ENST00000548877 CACNA1AO00555 2505 aa15.44■□□□□ 0.06
CDX2-202ENST00000548877 ZBTB42B2RXF5 422 aa15.44■□□□□ 0.06
CDX2-202ENST00000548877 C2CD4DB7Z1M9 353 aa15.44■□□□□ 0.06
CDX2-202ENST00000548877 HOXA2O43364 376 aa15.44■□□□□ 0.06
CDX2-202ENST00000548877 IGHDP01880 384 aa15.44■□□□□ 0.06
CDX2-202ENST00000548877 MTHFRP42898 656 aa15.44■□□□□ 0.06
CDX2-202ENST00000548877 ITGB3BPQ13352 177 aaPredicted RBP15.44■□□□□ 0.06
CDX2-202ENST00000548877 ZNF484Q5JVG2 852 aa15.44■□□□□ 0.06
CDX2-202ENST00000548877 CES5AQ6NT32 575 aa15.44■□□□□ 0.06
CDX2-202ENST00000548877 ABHD15Q6UXT9 468 aa15.44■□□□□ 0.06
CDX2-202ENST00000548877 FAM228AQ86W67 206 aa15.44■□□□□ 0.06
CDX2-202ENST00000548877 TMTC2Q8N394 836 aa15.44■□□□□ 0.06
CDX2-202ENST00000548877 MRPL43Q8N983 215 aaKnown RBP15.44■□□□□ 0.06
CDX2-202ENST00000548877 CYP2W1Q8TAV3 490 aa15.44■□□□□ 0.06
CDX2-202ENST00000548877 AGO4Q9HCK5 861 aaKnown RBP15.44■□□□□ 0.06
CDX2-202ENST00000548877 ENTPD7Q9NQZ7 604 aa15.44■□□□□ 0.06
CDX2-202ENST00000548877 HCFC2Q9Y5Z7 792 aa15.44■□□□□ 0.06
CDX2-202ENST00000548877 MYH9P35579 1960 aaKnown RBP15.44■□□□□ 0.06
CDX2-202ENST00000548877 MEIS1O00470 390 aa15.43■□□□□ 0.06
CDX2-202ENST00000548877 ARP10275 920 aa15.43■□□□□ 0.06
CDX2-202ENST00000548877 FGFR1P11362 822 aa15.43■□□□□ 0.06
CDX2-202ENST00000548877 KRT17Q04695 432 aa15.43■□□□□ 0.06
CDX2-202ENST00000548877 CEP55Q53EZ4 464 aa15.43■□□□□ 0.06
CDX2-202ENST00000548877 MCTP2Q6DN12 878 aa15.43■□□□□ 0.06
CDX2-202ENST00000548877 RUFY2Q8WXA3 655 aa15.43■□□□□ 0.06
CDX2-202ENST00000548877 ZNF558Q96NG5 402 aa15.43■□□□□ 0.06
CDX2-202ENST00000548877 MYL10Q9BUA6 226 aa15.43■□□□□ 0.06
CDX2-202ENST00000548877 SPG21Q9NZD8 308 aa15.43■□□□□ 0.06
CDX2-202ENST00000548877 USTQ9Y2C2 406 aa15.43■□□□□ 0.06
CDX2-202ENST00000548877 DENND4AQ7Z401 1863 aa15.42■□□□□ 0.06
CDX2-202ENST00000548877 C2orf71A6NGG8 1288 aa15.42■□□□□ 0.06
CDX2-202ENST00000548877 GPR32O75388 356 aa15.42■□□□□ 0.06
CDX2-202ENST00000548877 CCNE2O96020 404 aa15.42■□□□□ 0.06
CDX2-202ENST00000548877 FOSP01100 380 aaPredicted RBP15.42■□□□□ 0.06
CDX2-202ENST00000548877 CALM1P0DP23 149 aa15.42■□□□□ 0.06
CDX2-202ENST00000548877 CALM2P0DP24 149 aa15.42■□□□□ 0.06
CDX2-202ENST00000548877 CALM3P0DP25 149 aa15.42■□□□□ 0.06
CDX2-202ENST00000548877 LIFRP42702 1097 aa15.42■□□□□ 0.06
CDX2-202ENST00000548877 SMC1AQ14683 1233 aaKnown RBP15.42■□□□□ 0.06
CDX2-202ENST00000548877 FAM160B1Q5W0V3 765 aa15.42■□□□□ 0.06
CDX2-202ENST00000548877 LLGL2Q6P1M3 1020 aa15.42■□□□□ 0.06
CDX2-202ENST00000548877 NIPA1Q7RTP0 329 aa15.42■□□□□ 0.06
CDX2-202ENST00000548877 TMC7Q7Z402 723 aa15.42■□□□□ 0.06
CDX2-202ENST00000548877 SLC39A11Q8N1S5 342 aa15.42■□□□□ 0.06
CDX2-202ENST00000548877 ZNF710Q8N1W2 664 aa15.42■□□□□ 0.06
CDX2-202ENST00000548877 LRRC43Q8N309 656 aa15.42■□□□□ 0.06
CDX2-202ENST00000548877 PLCD3Q8N3E9 789 aa15.42■□□□□ 0.06
CDX2-202ENST00000548877 MAP4K1Q92918 833 aa15.42■□□□□ 0.06
CDX2-202ENST00000548877 NKD2Q969F2 451 aaPredicted RBP15.42■□□□□ 0.06
CDX2-202ENST00000548877 APOL5Q9BWW9 433 aa15.42■□□□□ 0.06
CDX2-202ENST00000548877 GINS2Q9Y248 185 aa15.42■□□□□ 0.06
CDX2-202ENST00000548877 ZNF292O60281 2723 aa15.41■□□□□ 0.06
CDX2-202ENST00000548877 CLASP2O75122 1294 aaKnown RBP15.41■□□□□ 0.06
CDX2-202ENST00000548877 C22orf31O95567 290 aa15.41■□□□□ 0.06
CDX2-202ENST00000548877 GSPT1P15170 499 aaKnown RBP15.41■□□□□ 0.06
CDX2-202ENST00000548877 ATP4AP20648 1035 aa15.41■□□□□ 0.06
CDX2-202ENST00000548877 CHMLP26374 656 aa15.41■□□□□ 0.06
CDX2-202ENST00000548877 KIAA1841Q6NSI8 718 aa15.41■□□□□ 0.06
CDX2-202ENST00000548877 TMEM87BQ96K49 555 aa15.41■□□□□ 0.06
CDX2-202ENST00000548877 OSMRQ99650 979 aa15.41■□□□□ 0.06
CDX2-202ENST00000548877 CDH22Q9UJ99 828 aa15.41■□□□□ 0.06
CDX2-202ENST00000548877 IRAK3Q9Y616 596 aa15.41■□□□□ 0.06
CDX2-202ENST00000548877 WDR81Q562E7 1941 aa15.41■□□□□ 0.06
CDX2-202ENST00000548877 SH2B2O14492 632 aaPredicted RBP15.4■□□□□ 0.06
CDX2-202ENST00000548877 DHX15O43143 795 aaKnown RBP15.4■□□□□ 0.06
CDX2-202ENST00000548877 IBSPP21815 317 aaPredicted RBP15.4■□□□□ 0.06
CDX2-202ENST00000548877 SP100P23497 879 aaPredicted RBP15.4■□□□□ 0.06
CDX2-202ENST00000548877 KIZQ2M2Z5 673 aa15.4■□□□□ 0.06
CDX2-202ENST00000548877 TTC22Q5TAA0 569 aa15.4■□□□□ 0.06
CDX2-202ENST00000548877 TMTC3Q6ZXV5 915 aa15.4■□□□□ 0.06
CDX2-202ENST00000548877 ECHDC2Q86YB7 292 aa15.4■□□□□ 0.06
CDX2-202ENST00000548877 CCDC60Q8IWA6 550 aaPredicted RBP15.4■□□□□ 0.06
CDX2-202ENST00000548877 CMTR1Q8N1G2 835 aaKnown RBP15.4■□□□□ 0.06
CDX2-202ENST00000548877 SMOC2Q9H3U7 446 aa15.4■□□□□ 0.06
CDX2-202ENST00000548877 RIC8AQ9NPQ8 531 aa15.4■□□□□ 0.06
CDX2-202ENST00000548877 TSHZ2Q9NRE2 1034 aa15.4■□□□□ 0.06
CDX2-202ENST00000548877 DZANK1Q9NVP4 752 aa15.4■□□□□ 0.06
CDX2-202ENST00000548877 MAFBQ9Y5Q3 323 aaPredicted RBP15.4■□□□□ 0.06
CDX2-202ENST00000548877 SGSM2O43147 1006 aa15.39■□□□□ 0.05
CDX2-202ENST00000548877 PRC1O43663 620 aa15.39■□□□□ 0.05
CDX2-202ENST00000548877 EOMESO95936 686 aa15.39■□□□□ 0.05
CDX2-202ENST00000548877 SREBF1P36956 1147 aa15.39■□□□□ 0.05
CDX2-202ENST00000548877 ID4P47928 161 aa15.39■□□□□ 0.05
CDX2-202ENST00000548877 CLLU1OSQ5K130 101 aa15.39■□□□□ 0.05
CDX2-202ENST00000548877 CWF19L1Q69YN2 538 aaKnown RBP15.39■□□□□ 0.05
CDX2-202ENST00000548877 PPP1R18Q6NYC8 613 aa15.39■□□□□ 0.05
CDX2-202ENST00000548877 PDXDC2PQ6P474 469 aa15.39■□□□□ 0.05
CDX2-202ENST00000548877 CASC1Q6TDU7 716 aa15.39■□□□□ 0.05
CDX2-202ENST00000548877 FRMD5Q7Z6J6 570 aa15.39■□□□□ 0.05
CDX2-202ENST00000548877 ZNF598Q86UK7 904 aaKnown RBP15.39■□□□□ 0.05
CDX2-202ENST00000548877 LINC01465Q8N7H1 131 aa15.39■□□□□ 0.05
CDX2-202ENST00000548877 TDRD5Q8NAT2 981 aaKnown RBP15.39■□□□□ 0.05
CDX2-202ENST00000548877 BBXQ8WY36 941 aaPredicted RBP15.39■□□□□ 0.05
CDX2-202ENST00000548877 RSPH1Q8WYR4 309 aa15.39■□□□□ 0.05
CDX2-202ENST00000548877 ZNF302Q9NR11 478 aa15.39■□□□□ 0.05
CDX2-202ENST00000548877 WDR87Q6ZQQ6 2873 aa15.39■□□□□ 0.05
CDX2-202ENST00000548877 DMXL1Q9Y485 3027 aa15.38■□□□□ 0.05
CDX2-202ENST00000548877 A0A0U1RQF3 1178 aa15.38■□□□□ 0.05
CDX2-202ENST00000548877 hCG_1642624A0A1W2PR95 340 aa15.38■□□□□ 0.05
CDX2-202ENST00000548877 CARNS1A5YM72 827 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms