RNA–Protein interactions for RNA: ENST00000548874.5

CACNB3-210, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 581 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-210ENST00000548874 SMIM35A0A1B0GVV1 85 aa23.47■■□□□ 1.35
CACNB3-210ENST00000548874 CYP2C9P11712 490 aa23.47■■□□□ 1.35
CACNB3-210ENST00000548874 POLGP54098 1239 aaPredicted RBP23.47■■□□□ 1.35
CACNB3-210ENST00000548874 UBE2HP62256 183 aa23.47■■□□□ 1.35
CACNB3-210ENST00000548874 MCM6Q14566 821 aa23.47■■□□□ 1.35
CACNB3-210ENST00000548874 EMC2Q15006 297 aa23.47■■□□□ 1.35
CACNB3-210ENST00000548874 TPRNQ4KMQ1 711 aa23.47■■□□□ 1.35
CACNB3-210ENST00000548874 RUFY4Q6ZNE9 571 aa23.47■■□□□ 1.35
CACNB3-210ENST00000548874 SLC7A3Q8WY07 619 aa23.47■■□□□ 1.35
CACNB3-210ENST00000548874 DHX38Q92620 1227 aaKnown RBP23.47■■□□□ 1.35
CACNB3-210ENST00000548874 WNT8BQ93098 351 aa23.47■■□□□ 1.35
CACNB3-210ENST00000548874 DHX58Q96C10 678 aa23.47■■□□□ 1.35
CACNB3-210ENST00000548874 JPH2Q9BR39 696 aaPredicted RBP23.47■■□□□ 1.35
CACNB3-210ENST00000548874 HTATIP2Q9BUP3 242 aa23.47■■□□□ 1.35
CACNB3-210ENST00000548874 NOD1Q9Y239 953 aa23.47■■□□□ 1.35
CACNB3-210ENST00000548874 GAS2O43903 313 aaKnown RBP23.46■■□□□ 1.35
CACNB3-210ENST00000548874 USO1O60763 962 aaKnown RBP23.46■■□□□ 1.35
CACNB3-210ENST00000548874 CYP11B2P19099 503 aa23.46■■□□□ 1.35
CACNB3-210ENST00000548874 SYKP43405 635 aa23.46■■□□□ 1.35
CACNB3-210ENST00000548874 MKRN4PQ13434 485 aaPredicted RBP23.46■■□□□ 1.35
CACNB3-210ENST00000548874 TRIM71Q2Q1W2 868 aaKnown RBP23.46■■□□□ 1.35
CACNB3-210ENST00000548874 RINT1Q6NUQ1 792 aa23.46■■□□□ 1.35
CACNB3-210ENST00000548874 C1orf186Q6ZWK4 172 aa23.46■■□□□ 1.35
CACNB3-210ENST00000548874 RPAINQ86UA6 219 aa23.46■■□□□ 1.35
CACNB3-210ENST00000548874 RETREG2Q8NC44 543 aa23.46■■□□□ 1.35
CACNB3-210ENST00000548874 ENGASEQ8NFI3 743 aa23.46■■□□□ 1.35
CACNB3-210ENST00000548874 RUSC1Q9BVN2 902 aa23.46■■□□□ 1.35
CACNB3-210ENST00000548874 ATP6V0A4Q9HBG4 840 aa23.46■■□□□ 1.35
CACNB3-210ENST00000548874 LMBRD1Q9NUN5 540 aa23.46■■□□□ 1.35
CACNB3-210ENST00000548874 ACTN4O43707 911 aaKnown RBP23.45■■□□□ 1.34
CACNB3-210ENST00000548874 RBL2Q08999 1139 aa23.45■■□□□ 1.34
CACNB3-210ENST00000548874 EFCAB12Q6NXP0 572 aa23.45■■□□□ 1.34
CACNB3-210ENST00000548874 KIAA0319LQ8IZA0 1049 aa23.45■■□□□ 1.34
CACNB3-210ENST00000548874 LRRC71Q8N4P6 559 aa23.45■■□□□ 1.34
CACNB3-210ENST00000548874 KCND2Q9NZV8 630 aa23.45■■□□□ 1.34
CACNB3-210ENST00000548874 USP25Q9UHP3 1055 aa23.45■■□□□ 1.34
CACNB3-210ENST00000548874 TBX21Q9UL17 535 aa23.45■■□□□ 1.34
CACNB3-210ENST00000548874 SSBP05455 408 aaKnown RBP eCLIP23.44■■□□□ 1.34
CACNB3-210ENST00000548874 CLTBP09497 229 aa23.44■■□□□ 1.34
CACNB3-210ENST00000548874 CLCN3P51790 818 aa23.44■■□□□ 1.34
CACNB3-210ENST00000548874 FAM160A1Q05DH4 1040 aa23.44■■□□□ 1.34
CACNB3-210ENST00000548874 DRP2Q13474 957 aa23.44■■□□□ 1.34
CACNB3-210ENST00000548874 SNW1Q13573 536 aaKnown RBP23.44■■□□□ 1.34
CACNB3-210ENST00000548874 FMR1NBQ8N0W7 255 aaPredicted RBP23.44■■□□□ 1.34
CACNB3-210ENST00000548874 METTL13Q8N6R0 699 aa23.44■■□□□ 1.34
CACNB3-210ENST00000548874 MCPH1Q8NEM0 835 aa23.44■■□□□ 1.34
CACNB3-210ENST00000548874 MTRQ99707 1265 aa23.44■■□□□ 1.34
CACNB3-210ENST00000548874 SUGCTQ9HAC7 445 aa23.44■■□□□ 1.34
CACNB3-210ENST00000548874 MAGEF1Q9HAY2 307 aa23.44■■□□□ 1.34
CACNB3-210ENST00000548874 BMP2KQ9NSY1 1161 aaPredicted RBP23.44■■□□□ 1.34
CACNB3-210ENST00000548874 KBTBD4Q9NVX7 518 aa23.44■■□□□ 1.34
CACNB3-210ENST00000548874 GOLGA6L22H0YM25 854 aa23.43■■□□□ 1.34
CACNB3-210ENST00000548874 RPLP2P05387 115 aaKnown RBP23.43■■□□□ 1.34
CACNB3-210ENST00000548874 SLFN14P0C7P3 912 aa23.43■■□□□ 1.34
CACNB3-210ENST00000548874 GUCY2CP25092 1073 aa23.43■■□□□ 1.34
CACNB3-210ENST00000548874 TMOD1P28289 359 aa23.43■■□□□ 1.34
CACNB3-210ENST00000548874 LONRF3Q496Y0 759 aa23.43■■□□□ 1.34
CACNB3-210ENST00000548874 ARSHQ5FYA8 562 aa23.43■■□□□ 1.34
CACNB3-210ENST00000548874 SV2BQ7L1I2 683 aa23.43■■□□□ 1.34
CACNB3-210ENST00000548874 GPBP1Q86WP2 473 aa23.43■■□□□ 1.34
CACNB3-210ENST00000548874 DNAJB3Q8WWF6 145 aa23.43■■□□□ 1.34
CACNB3-210ENST00000548874 TNMDQ9H2S6 317 aa23.43■■□□□ 1.34
CACNB3-210ENST00000548874 SERTAD1Q9UHV2 236 aa23.43■■□□□ 1.34
CACNB3-210ENST00000548874 DNAH12Q6ZR08 3092 aa23.42■■□□□ 1.34
CACNB3-210ENST00000548874 CAND2O75155 1236 aa23.42■■□□□ 1.34
CACNB3-210ENST00000548874 ZNF202O95125 648 aa23.42■■□□□ 1.34
CACNB3-210ENST00000548874 LIG1P18858 919 aa23.42■■□□□ 1.34
CACNB3-210ENST00000548874 RGS19P49795 217 aa23.42■■□□□ 1.34
CACNB3-210ENST00000548874 DHX8Q14562 1220 aaKnown RBP23.42■■□□□ 1.34
CACNB3-210ENST00000548874 IER5Q5VY09 327 aa23.42■■□□□ 1.34
CACNB3-210ENST00000548874 NME8Q8N427 588 aa23.42■■□□□ 1.34
CACNB3-210ENST00000548874 CAGE1Q8TC20 777 aa23.42■■□□□ 1.34
CACNB3-210ENST00000548874 TCP11Q8WWU5 503 aa23.42■■□□□ 1.34
CACNB3-210ENST00000548874 NOC4LQ9BVI4 516 aaKnown RBP23.42■■□□□ 1.34
CACNB3-210ENST00000548874 TIPINQ9BVW5 301 aa23.42■■□□□ 1.34
CACNB3-210ENST00000548874 FAM49AQ9H0Q0 323 aaPredicted RBP23.42■■□□□ 1.34
CACNB3-210ENST00000548874 EVPLQ92817 2033 aa23.42■■□□□ 1.34
CACNB3-210ENST00000548874 KIAA0355O15063 1070 aa23.41■■□□□ 1.34
CACNB3-210ENST00000548874 ARL2P36404 184 aa23.41■■□□□ 1.34
CACNB3-210ENST00000548874 DNM2P50570 870 aa23.41■■□□□ 1.34
CACNB3-210ENST00000548874 MAPK7Q13164 816 aa23.41■■□□□ 1.34
CACNB3-210ENST00000548874 SH3RF1Q7Z6J0 888 aa23.41■■□□□ 1.34
CACNB3-210ENST00000548874 TMEM143Q96AN5 459 aa23.41■■□□□ 1.34
CACNB3-210ENST00000548874 MAP7D2Q96T17 732 aa23.41■■□□□ 1.34
CACNB3-210ENST00000548874 GPRC5CQ9NQ84 441 aa23.41■■□□□ 1.34
CACNB3-210ENST00000548874 TMEM39AQ9NV64 488 aa23.41■■□□□ 1.34
CACNB3-210ENST00000548874 MKI67P46013 3256 aaKnown RBP23.4■■□□□ 1.34
CACNB3-210ENST00000548874 MYMKA6NI61 221 aa23.4■■□□□ 1.34
CACNB3-210ENST00000548874 PITPNM1O00562 1244 aa23.4■■□□□ 1.34
CACNB3-210ENST00000548874 NR1I2O75469 434 aa23.4■■□□□ 1.34
CACNB3-210ENST00000548874 BFSP2Q13515 415 aa23.4■■□□□ 1.34
CACNB3-210ENST00000548874 KRBA2Q6ZNG9 492 aa23.4■■□□□ 1.34
CACNB3-210ENST00000548874 RSPH3Q86UC2 560 aa23.4■■□□□ 1.34
CACNB3-210ENST00000548874 CEP57L1Q8IYX8 460 aa23.4■■□□□ 1.34
CACNB3-210ENST00000548874 DAW1Q8N136 415 aa23.4■■□□□ 1.34
CACNB3-210ENST00000548874 CCDC155Q8N6L0 562 aa23.4■■□□□ 1.34
CACNB3-210ENST00000548874 SUCLA2Q9P2R7 463 aaPredicted RBP23.4■■□□□ 1.34
CACNB3-210ENST00000548874 TRIM43BA6NCK2 446 aa23.39■■□□□ 1.33
CACNB3-210ENST00000548874 CKBP12277 381 aa23.39■■□□□ 1.33
CACNB3-210ENST00000548874 MCM4P33991 863 aa23.39■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms