RNA–Protein interactions for RNA: ENST00000548821.1

GCN1-205, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 504 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-205ENST00000548821 PKN1Q16512 942 aa10.86□□□□□ -0.67
GCN1-205ENST00000548821 XKR3Q5GH77 459 aa10.86□□□□□ -0.67
GCN1-205ENST00000548821 MIER3Q7Z3K6 550 aa10.86□□□□□ -0.67
GCN1-205ENST00000548821 TMEM87AQ8NBN3 555 aa10.86□□□□□ -0.67
GCN1-205ENST00000548821 TET1Q8NFU7 2136 aa10.86□□□□□ -0.67
GCN1-205ENST00000548821 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.86□□□□□ -0.67
GCN1-205ENST00000548821 TRAPPC12Q8WVT3 735 aa10.86□□□□□ -0.67
GCN1-205ENST00000548821 FAM122AQ96E09 287 aa10.86□□□□□ -0.67
GCN1-205ENST00000548821 FAM20AQ96MK3 541 aa10.86□□□□□ -0.67
GCN1-205ENST00000548821 GCOM2Q9BZD3 368 aaPredicted RBP10.86□□□□□ -0.67
GCN1-205ENST00000548821 SLKQ9H2G2 1235 aaPredicted RBP10.86□□□□□ -0.67
GCN1-205ENST00000548821 ERVK-5Q9HDB9 667 aa10.86□□□□□ -0.67
GCN1-205ENST00000548821 PDRG1Q9NUG6 133 aa10.86□□□□□ -0.67
GCN1-205ENST00000548821 DAXXQ9UER7 740 aaPredicted RBP10.86□□□□□ -0.67
GCN1-205ENST00000548821 LZTS1Q9Y250 596 aa10.86□□□□□ -0.67
GCN1-205ENST00000548821 TELO2Q9Y4R8 837 aa10.86□□□□□ -0.67
GCN1-205ENST00000548821 PRUNE2Q8WUY3 3088 aa10.86□□□□□ -0.67
GCN1-205ENST00000548821 EYSQ5T1H1 3165 aa10.85□□□□□ -0.67
GCN1-205ENST00000548821 C22orf31O95567 290 aa10.85□□□□□ -0.67
GCN1-205ENST00000548821 SFPQP23246 707 aaKnown RBP eCLIP10.85□□□□□ -0.67
GCN1-205ENST00000548821 NDUFV1P49821 464 aa10.85□□□□□ -0.67
GCN1-205ENST00000548821 NLRP11P59045 1033 aaKnown RBP10.85□□□□□ -0.67
GCN1-205ENST00000548821 ANAPC15P60006 121 aa10.85□□□□□ -0.67
GCN1-205ENST00000548821 FAM189BP81408 668 aa10.85□□□□□ -0.67
GCN1-205ENST00000548821 COL19A1Q14993 1142 aa10.85□□□□□ -0.67
GCN1-205ENST00000548821 NTRK3Q16288 839 aa10.85□□□□□ -0.67
GCN1-205ENST00000548821 KIZQ2M2Z5 673 aa10.85□□□□□ -0.67
GCN1-205ENST00000548821 OTUD6AQ7L8S5 288 aa10.85□□□□□ -0.67
GCN1-205ENST00000548821 ADHFE1Q8IWW8 467 aa10.85□□□□□ -0.67
GCN1-205ENST00000548821 THNSL1Q8IYQ7 743 aa10.85□□□□□ -0.67
GCN1-205ENST00000548821 DAGLBQ8NCG7 672 aa10.85□□□□□ -0.67
GCN1-205ENST00000548821 TBCKQ8TEA7 893 aa10.85□□□□□ -0.67
GCN1-205ENST00000548821 NLRP7Q8WX94 980 aa10.85□□□□□ -0.67
GCN1-205ENST00000548821 SLC5A5Q92911 643 aa10.85□□□□□ -0.67
GCN1-205ENST00000548821 MRPL9Q9BYD2 267 aaKnown RBP10.85□□□□□ -0.67
GCN1-205ENST00000548821 TMEM117Q9H0C3 514 aa10.85□□□□□ -0.67
GCN1-205ENST00000548821 TLE6Q9H808 572 aa10.85□□□□□ -0.67
GCN1-205ENST00000548821 RC3H2Q9HBD1 1191 aaKnown RBP10.85□□□□□ -0.67
GCN1-205ENST00000548821 NGRNQ9NPE2 291 aaKnown RBP10.85□□□□□ -0.67
GCN1-205ENST00000548821 VPS54Q9P1Q0 977 aa10.85□□□□□ -0.67
GCN1-205ENST00000548821 CD207Q9UJ71 328 aa10.85□□□□□ -0.67
GCN1-205ENST00000548821 NOC2LQ9Y3T9 749 aaKnown RBP10.85□□□□□ -0.67
GCN1-205ENST00000548821 TRANK1O15050 2925 aa10.85□□□□□ -0.67
GCN1-205ENST00000548821 PRRC2BQ5JSZ5 2229 aaKnown RBP10.84□□□□□ -0.67
GCN1-205ENST00000548821 TBKBP1A7MCY6 615 aa10.84□□□□□ -0.67
GCN1-205ENST00000548821 TBX3O15119 743 aa10.84□□□□□ -0.67
GCN1-205ENST00000548821 GRM6O15303 877 aa10.84□□□□□ -0.67
GCN1-205ENST00000548821 MSH4O15457 936 aa10.84□□□□□ -0.67
GCN1-205ENST00000548821 GAS2O43903 313 aaKnown RBP10.84□□□□□ -0.67
GCN1-205ENST00000548821 CPA1P15085 419 aa10.84□□□□□ -0.67
GCN1-205ENST00000548821 ALDH7A1P49419 539 aaKnown RBP10.84□□□□□ -0.67
GCN1-205ENST00000548821 PSMC5P62195 406 aa10.84□□□□□ -0.67
GCN1-205ENST00000548821 SMAD4Q13485 552 aaKnown RBP10.84□□□□□ -0.67
GCN1-205ENST00000548821 GIT2Q14161 759 aa10.84□□□□□ -0.67
GCN1-205ENST00000548821 PCBP1Q15365 356 aaKnown RBP eCLIP10.84□□□□□ -0.67
GCN1-205ENST00000548821 CTC1Q2NKJ3 1217 aa10.84□□□□□ -0.67
GCN1-205ENST00000548821 PAN2Q504Q3 1202 aaKnown RBP10.84□□□□□ -0.67
GCN1-205ENST00000548821 TRMT1LQ7Z2T5 733 aaKnown RBP10.84□□□□□ -0.67
GCN1-205ENST00000548821 SPRED2Q7Z698 418 aa10.84□□□□□ -0.67
GCN1-205ENST00000548821 RTN4RL1Q86UN2 441 aaPredicted RBP10.84□□□□□ -0.67
GCN1-205ENST00000548821 ZNF410Q86VK4 478 aa10.84□□□□□ -0.67
GCN1-205ENST00000548821 SLFN12Q8IYM2 578 aa10.84□□□□□ -0.67
GCN1-205ENST00000548821 CRIPAKQ8N1N5 446 aa10.84□□□□□ -0.67
GCN1-205ENST00000548821 EFHBQ8N7U6 833 aa10.84□□□□□ -0.67
GCN1-205ENST00000548821 KLHL23Q8NBE8 558 aa10.84□□□□□ -0.67
GCN1-205ENST00000548821 SPPL3Q8TCT6 385 aa10.84□□□□□ -0.67
GCN1-205ENST00000548821 POF1BQ8WVV4 589 aa10.84□□□□□ -0.67
GCN1-205ENST00000548821 SLC7A3Q8WY07 619 aa10.84□□□□□ -0.67
GCN1-205ENST00000548821 NECAB3Q96P71 396 aaPredicted RBP10.84□□□□□ -0.67
GCN1-205ENST00000548821 OSMRQ99650 979 aa10.84□□□□□ -0.67
GCN1-205ENST00000548821 NIFKQ9BYG3 293 aaKnown RBP10.84□□□□□ -0.67
GCN1-205ENST00000548821 KCNH6Q9H252 994 aa10.84□□□□□ -0.67
GCN1-205ENST00000548821 IGFLR1Q9H665 355 aa10.84□□□□□ -0.67
GCN1-205ENST00000548821 ALG13Q9NP73 1137 aaKnown RBP10.84□□□□□ -0.67
GCN1-205ENST00000548821 TLR9Q9NR96 1032 aa10.84□□□□□ -0.67
GCN1-205ENST00000548821 DDX25Q9UHL0 483 aaKnown RBP10.84□□□□□ -0.67
GCN1-205ENST00000548821 MRPL42Q9Y6G3 142 aaKnown RBP10.84□□□□□ -0.67
GCN1-205ENST00000548821 PRR33A8MZF0 331 aa10.83□□□□□ -0.68
GCN1-205ENST00000548821 C9IYK1 514 aa10.83□□□□□ -0.68
GCN1-205ENST00000548821 H3BQ06 376 aaPredicted RBP10.83□□□□□ -0.68
GCN1-205ENST00000548821 ASAP2O43150 1006 aa10.83□□□□□ -0.68
GCN1-205ENST00000548821 DCXO43602 365 aa10.83□□□□□ -0.68
GCN1-205ENST00000548821 CHMP2AO43633 222 aa10.83□□□□□ -0.68
GCN1-205ENST00000548821 GPR32O75388 356 aa10.83□□□□□ -0.68
GCN1-205ENST00000548821 RAB27AP51159 221 aa10.83□□□□□ -0.68
GCN1-205ENST00000548821 PLCB3Q01970 1234 aa10.83□□□□□ -0.68
GCN1-205ENST00000548821 PRKCEQ02156 737 aa10.83□□□□□ -0.68
GCN1-205ENST00000548821 ADAM15Q13444 863 aa10.83□□□□□ -0.68
GCN1-205ENST00000548821 COL9A3Q14050 684 aaPredicted RBP10.83□□□□□ -0.68
GCN1-205ENST00000548821 TRIM29Q14134 588 aa10.83□□□□□ -0.68
GCN1-205ENST00000548821 SMAD2Q15796 467 aaKnown RBP10.83□□□□□ -0.68
GCN1-205ENST00000548821 TMEM266Q2M3C6 531 aa10.83□□□□□ -0.68
GCN1-205ENST00000548821 PPP4R3AQ6IN85 833 aa10.83□□□□□ -0.68
GCN1-205ENST00000548821 LRRC43Q8N309 656 aa10.83□□□□□ -0.68
GCN1-205ENST00000548821 TCP11Q8WWU5 503 aa10.83□□□□□ -0.68
GCN1-205ENST00000548821 PGBD4Q96DM1 585 aa10.83□□□□□ -0.68
GCN1-205ENST00000548821 OSBPL7Q9BZF2 842 aa10.83□□□□□ -0.68
GCN1-205ENST00000548821 CHD7Q9P2D1 2997 aa10.83□□□□□ -0.68
GCN1-205ENST00000548821 TTC28Q96AY4 2481 aa10.83□□□□□ -0.68
GCN1-205ENST00000548821 MICAL3Q7RTP6 2002 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms