RNA–Protein interactions for RNA: ENST00000548357.2

SNX29P1-201, Transcript of sorting nexin 29 pseudogene 1, humanhuman

BASIC

Gene SNX29P1, Length 1,007 nt, Biotype unprocessed pseudogene, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29P1-201ENST00000548357 TMEM150BA6NC51 233 aa17.24■□□□□ 0.35
SNX29P1-201ENST00000548357 STAG3L1P0CL83 205 aa17.24■□□□□ 0.35
SNX29P1-201ENST00000548357 PDIA3P30101 505 aaKnown RBP17.24■□□□□ 0.35
SNX29P1-201ENST00000548357 NRIP1P48552 1158 aa17.24■□□□□ 0.35
SNX29P1-201ENST00000548357 SETQ01105 290 aaPredicted RBP17.24■□□□□ 0.35
SNX29P1-201ENST00000548357 RBM23Q86U06 439 aaKnown RBP17.24■□□□□ 0.35
SNX29P1-201ENST00000548357 ADHFE1Q8IWW8 467 aa17.24■□□□□ 0.35
SNX29P1-201ENST00000548357 CKAP2LQ8IYA6 745 aa17.24■□□□□ 0.35
SNX29P1-201ENST00000548357 METTL13Q8N6R0 699 aa17.24■□□□□ 0.35
SNX29P1-201ENST00000548357 VN1R2Q8NFZ6 395 aa17.24■□□□□ 0.35
SNX29P1-201ENST00000548357 BBXQ8WY36 941 aaPredicted RBP17.24■□□□□ 0.35
SNX29P1-201ENST00000548357 AIFM3Q96NN9 605 aa17.24■□□□□ 0.35
SNX29P1-201ENST00000548357 CWH43Q9H720 699 aa17.24■□□□□ 0.35
SNX29P1-201ENST00000548357 LRFN2Q9ULH4 789 aa17.24■□□□□ 0.35
SNX29P1-201ENST00000548357 BARX2Q9UMQ3 279 aaPredicted RBP17.24■□□□□ 0.35
SNX29P1-201ENST00000548357 FGFR4P22455 802 aa17.23■□□□□ 0.35
SNX29P1-201ENST00000548357 DRP2Q13474 957 aa17.23■□□□□ 0.35
SNX29P1-201ENST00000548357 LRRC55Q6ZSA7 311 aa17.23■□□□□ 0.35
SNX29P1-201ENST00000548357 FBXL16Q8N461 479 aa17.23■□□□□ 0.35
SNX29P1-201ENST00000548357 TNPO1Q92973 898 aaKnown RBP17.23■□□□□ 0.35
SNX29P1-201ENST00000548357 RNF26Q9BY78 433 aaPredicted RBP17.23■□□□□ 0.35
SNX29P1-201ENST00000548357 ADAMTS10Q9H324 1103 aa17.23■□□□□ 0.35
SNX29P1-201ENST00000548357 UNC45AQ9H3U1 944 aa17.23■□□□□ 0.35
SNX29P1-201ENST00000548357 TBC1D22BQ9NU19 505 aa17.23■□□□□ 0.35
SNX29P1-201ENST00000548357 CD207Q9UJ71 328 aa17.23■□□□□ 0.35
SNX29P1-201ENST00000548357 PCDHB7Q9Y5E2 793 aa17.23■□□□□ 0.35
SNX29P1-201ENST00000548357 PCDHA10Q9Y5I2 948 aa17.23■□□□□ 0.35
SNX29P1-201ENST00000548357 CCDC196A0A1B0GTZ2 297 aa17.22■□□□□ 0.35
SNX29P1-201ENST00000548357 DENND3A2RUS2 1198 aa17.22■□□□□ 0.35
SNX29P1-201ENST00000548357 PER2O15055 1255 aa17.22■□□□□ 0.35
SNX29P1-201ENST00000548357 CHMP2AO43633 222 aa17.22■□□□□ 0.35
SNX29P1-201ENST00000548357 TDP2O95551 362 aa17.22■□□□□ 0.35
SNX29P1-201ENST00000548357 PSAPP07602 524 aa17.22■□□□□ 0.35
SNX29P1-201ENST00000548357 IFNAR1P17181 557 aa17.22■□□□□ 0.35
SNX29P1-201ENST00000548357 PBX3P40426 434 aa17.22■□□□□ 0.35
SNX29P1-201ENST00000548357 CRYBB1P53674 252 aaPredicted RBP17.22■□□□□ 0.35
SNX29P1-201ENST00000548357 ERVFC1P60507 584 aa17.22■□□□□ 0.35
SNX29P1-201ENST00000548357 PRKCEQ02156 737 aa17.22■□□□□ 0.35
SNX29P1-201ENST00000548357 SMAD4Q13485 552 aaKnown RBP17.22■□□□□ 0.35
SNX29P1-201ENST00000548357 NPY5RQ15761 445 aa17.22■□□□□ 0.35
SNX29P1-201ENST00000548357 SMAP1Q8IYB5 467 aaPredicted RBP17.22■□□□□ 0.35
SNX29P1-201ENST00000548357 COLGALT1Q8NBJ5 622 aa17.22■□□□□ 0.35
SNX29P1-201ENST00000548357 SH2D3AQ9BRG2 576 aa17.22■□□□□ 0.35
SNX29P1-201ENST00000548357 TYW1Q9NV66 732 aaKnown RBP17.22■□□□□ 0.35
SNX29P1-201ENST00000548357 MUTYHQ9UIF7 546 aa17.22■□□□□ 0.35
SNX29P1-201ENST00000548357 PRR33A8MZF0 331 aa17.21■□□□□ 0.35
SNX29P1-201ENST00000548357 DCXO43602 365 aa17.21■□□□□ 0.35
SNX29P1-201ENST00000548357 CSDE1O75534 798 aaKnown RBP17.21■□□□□ 0.35
SNX29P1-201ENST00000548357 STBD1O95210 358 aa17.21■□□□□ 0.35
SNX29P1-201ENST00000548357 OATP04181 439 aa17.21■□□□□ 0.35
SNX29P1-201ENST00000548357 NDUFV1P49821 464 aa17.21■□□□□ 0.35
SNX29P1-201ENST00000548357 EVCP57679 992 aa17.21■□□□□ 0.35
SNX29P1-201ENST00000548357 NLRP11P59045 1033 aaKnown RBP17.21■□□□□ 0.35
SNX29P1-201ENST00000548357 FAM189BP81408 668 aa17.21■□□□□ 0.35
SNX29P1-201ENST00000548357 NAALADL2Q58DX5 795 aa17.21■□□□□ 0.35
SNX29P1-201ENST00000548357 EFCAB12Q6NXP0 572 aa17.21■□□□□ 0.35
SNX29P1-201ENST00000548357 SLC24A5Q71RS6 500 aa17.21■□□□□ 0.35
SNX29P1-201ENST00000548357 EFHBQ8N7U6 833 aa17.21■□□□□ 0.35
SNX29P1-201ENST00000548357 CCDC12Q8WUD4 166 aaPredicted RBP17.21■□□□□ 0.35
SNX29P1-201ENST00000548357 SLC5A5Q92911 643 aa17.21■□□□□ 0.35
SNX29P1-201ENST00000548357 CCDC136Q96JN2 1154 aa17.21■□□□□ 0.35
SNX29P1-201ENST00000548357 DISC1Q9NRI5 854 aa17.21■□□□□ 0.35
SNX29P1-201ENST00000548357 PRKAG3Q9UGI9 489 aa17.21■□□□□ 0.35
SNX29P1-201ENST00000548357 HCN4Q9Y3Q4 1203 aa17.21■□□□□ 0.35
SNX29P1-201ENST00000548357 SAMM50Q9Y512 469 aa17.21■□□□□ 0.35
SNX29P1-201ENST00000548357 M0R2N6 131 aa17.2■□□□□ 0.34
SNX29P1-201ENST00000548357 FSCN2O14926 492 aa17.2■□□□□ 0.34
SNX29P1-201ENST00000548357 NCK2O43639 380 aa17.2■□□□□ 0.34
SNX29P1-201ENST00000548357 FGF18O76093 207 aa17.2■□□□□ 0.34
SNX29P1-201ENST00000548357 GNA11P29992 359 aa17.2■□□□□ 0.34
SNX29P1-201ENST00000548357 SPOUT1Q5T280 376 aaKnown RBP17.2■□□□□ 0.34
SNX29P1-201ENST00000548357 SMRP1Q8NCR6 262 aa17.2■□□□□ 0.34
SNX29P1-201ENST00000548357 TBCKQ8TEA7 893 aa17.2■□□□□ 0.34
SNX29P1-201ENST00000548357 CASD1Q96PB1 797 aa17.2■□□□□ 0.34
SNX29P1-201ENST00000548357 CEP89Q96ST8 783 aa17.2■□□□□ 0.34
SNX29P1-201ENST00000548357 C1orf112Q9NSG2 853 aa17.2■□□□□ 0.34
SNX29P1-201ENST00000548357 AKT3Q9Y243 479 aa17.2■□□□□ 0.34
SNX29P1-201ENST00000548357 C2orf16Q68DN1 1984 aa17.2■□□□□ 0.34
SNX29P1-201ENST00000548357 WDR64B1ANS9 1081 aa17.19■□□□□ 0.34
SNX29P1-201ENST00000548357 GPR182O15218 404 aa17.19■□□□□ 0.34
SNX29P1-201ENST00000548357 PSMD10O75832 226 aa17.19■□□□□ 0.34
SNX29P1-201ENST00000548357 EYA4O95677 639 aa17.19■□□□□ 0.34
SNX29P1-201ENST00000548357 ATF7P17544 494 aaPredicted RBP17.19■□□□□ 0.34
SNX29P1-201ENST00000548357 HOXD11P31277 338 aaPredicted RBP17.19■□□□□ 0.34
SNX29P1-201ENST00000548357 GPC3P51654 580 aa17.19■□□□□ 0.34
SNX29P1-201ENST00000548357 CLLU1OSQ5K130 101 aa17.19■□□□□ 0.34
SNX29P1-201ENST00000548357 RNF135Q8IUD6 432 aa17.19■□□□□ 0.34
SNX29P1-201ENST00000548357 UPF3BQ9BZI7 483 aaKnown RBP17.19■□□□□ 0.34
SNX29P1-201ENST00000548357 ZSWIM6Q9HCJ5 1215 aa17.19■□□□□ 0.34
SNX29P1-201ENST00000548357 TMEM161AQ9NX61 479 aa17.19■□□□□ 0.34
SNX29P1-201ENST00000548357 CDH22Q9UJ99 828 aa17.19■□□□□ 0.34
SNX29P1-201ENST00000548357 DENND4AQ7Z401 1863 aa17.18■□□□□ 0.34
SNX29P1-201ENST00000548357 ALADP13716 330 aa17.18■□□□□ 0.34
SNX29P1-201ENST00000548357 NLRP5P59047 1200 aa17.18■□□□□ 0.34
SNX29P1-201ENST00000548357 AKAP17AQ02040 695 aaKnown RBP17.18■□□□□ 0.34
SNX29P1-201ENST00000548357 STK3Q13188 491 aa17.18■□□□□ 0.34
SNX29P1-201ENST00000548357 TARBP2Q15633 366 aaKnown RBP17.18■□□□□ 0.34
SNX29P1-201ENST00000548357 LRCH2Q5VUJ6 765 aa17.18■□□□□ 0.34
SNX29P1-201ENST00000548357 PLPP4Q5VZY2 271 aa17.18■□□□□ 0.34
SNX29P1-201ENST00000548357 B3GNT9Q6UX72 402 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms