RNA–Protein interactions for RNA: ENST00000547687.1

CHMP1A-204, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 1 (best)

Gene CHMP1A, Length 2,007 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-204ENST00000547687 H0YGN5 161 aa18.28■□□□□ 0.52
CHMP1A-204ENST00000547687 FECHP22830 423 aa18.28■□□□□ 0.52
CHMP1A-204ENST00000547687 CYP4A11Q02928 519 aa18.28■□□□□ 0.52
CHMP1A-204ENST00000547687 RAD9BQ6WBX8 426 aa18.28■□□□□ 0.52
CHMP1A-204ENST00000547687 VSIG10LQ86VR7 867 aa18.28■□□□□ 0.52
CHMP1A-204ENST00000547687 EEF2KMTQ96G04 330 aa18.28■□□□□ 0.52
CHMP1A-204ENST00000547687 EIF2AK1Q9BQI3 630 aaKnown RBP18.28■□□□□ 0.52
CHMP1A-204ENST00000547687 PANK4Q9NVE7 773 aa18.28■□□□□ 0.52
CHMP1A-204ENST00000547687 DNAI1Q9UI46 699 aa18.28■□□□□ 0.52
CHMP1A-204ENST00000547687 TRIOBPQ9H2D6 2365 aa18.28■□□□□ 0.52
CHMP1A-204ENST00000547687 B4DLN1 442 aa18.27■□□□□ 0.52
CHMP1A-204ENST00000547687 RNF225M0QZC1 329 aaPredicted RBP18.27■□□□□ 0.52
CHMP1A-204ENST00000547687 MTIF2P46199 727 aaKnown RBP18.27■□□□□ 0.52
CHMP1A-204ENST00000547687 GJC2Q5T442 439 aaPredicted RBP18.27■□□□□ 0.52
CHMP1A-204ENST00000547687 RIT2Q99578 217 aa18.27■□□□□ 0.52
CHMP1A-204ENST00000547687 DESI2Q9BSY9 194 aa18.27■□□□□ 0.52
CHMP1A-204ENST00000547687 TEKT3Q9BXF9 490 aa18.27■□□□□ 0.52
CHMP1A-204ENST00000547687 UNC45AQ9H3U1 944 aa18.27■□□□□ 0.52
CHMP1A-204ENST00000547687 ABHD10Q9NUJ1 306 aa18.27■□□□□ 0.52
CHMP1A-204ENST00000547687 RGL1Q9NZL6 768 aa18.27■□□□□ 0.52
CHMP1A-204ENST00000547687 DIS3Q9Y2L1 958 aaKnown RBP18.27■□□□□ 0.52
CHMP1A-204ENST00000547687 STK24Q9Y6E0 443 aa18.27■□□□□ 0.52
CHMP1A-204ENST00000547687 PHLPP2Q6ZVD8 1323 aa18.27■□□□□ 0.51
CHMP1A-204ENST00000547687 DDX39AO00148 427 aaKnown RBP18.27■□□□□ 0.51
CHMP1A-204ENST00000547687 SEPT4O43236 478 aa18.27■□□□□ 0.51
CHMP1A-204ENST00000547687 SNAI1O95863 264 aaPredicted RBP18.27■□□□□ 0.51
CHMP1A-204ENST00000547687 CCDC175P0C221 793 aa18.27■□□□□ 0.51
CHMP1A-204ENST00000547687 PSMC6P62333 389 aa18.27■□□□□ 0.51
CHMP1A-204ENST00000547687 COASYQ13057 564 aa18.27■□□□□ 0.51
CHMP1A-204ENST00000547687 B3GNT9Q6UX72 402 aa18.27■□□□□ 0.51
CHMP1A-204ENST00000547687 TMTC1Q8IUR5 882 aa18.27■□□□□ 0.51
CHMP1A-204ENST00000547687 POLR3CQ9BUI4 534 aaPredicted RBP18.27■□□□□ 0.51
CHMP1A-204ENST00000547687 HTATIP2Q9BUP3 242 aa18.27■□□□□ 0.51
CHMP1A-204ENST00000547687 MAF1Q9H063 256 aa18.27■□□□□ 0.51
CHMP1A-204ENST00000547687 C11orf49Q9H6J7 331 aa18.27■□□□□ 0.51
CHMP1A-204ENST00000547687 AGO4Q9HCK5 861 aaKnown RBP18.27■□□□□ 0.51
CHMP1A-204ENST00000547687 KIAA1217Q5T5P2 1943 aa18.26■□□□□ 0.51
CHMP1A-204ENST00000547687 ASTN1O14525 1302 aa18.26■□□□□ 0.51
CHMP1A-204ENST00000547687 POTEB2H3BUK9 544 aa18.26■□□□□ 0.51
CHMP1A-204ENST00000547687 DHX15O43143 795 aaKnown RBP18.26■□□□□ 0.51
CHMP1A-204ENST00000547687 FGFR1OPO95684 399 aaKnown RBP18.26■□□□□ 0.51
CHMP1A-204ENST00000547687 CCND2P30279 289 aa18.26■□□□□ 0.51
CHMP1A-204ENST00000547687 KRT9P35527 623 aa18.26■□□□□ 0.51
CHMP1A-204ENST00000547687 ITGB3BPQ13352 177 aaPredicted RBP18.26■□□□□ 0.51
CHMP1A-204ENST00000547687 SYCP1Q15431 976 aa18.26■□□□□ 0.51
CHMP1A-204ENST00000547687 XRRA1Q6P2D8 792 aa18.26■□□□□ 0.51
CHMP1A-204ENST00000547687 GPBP1Q86WP2 473 aa18.26■□□□□ 0.51
CHMP1A-204ENST00000547687 CCDC65Q8IXS2 484 aa18.26■□□□□ 0.51
CHMP1A-204ENST00000547687 ZNF710Q8N1W2 664 aa18.26■□□□□ 0.51
CHMP1A-204ENST00000547687 ANKLE1Q8NAG6 615 aa18.26■□□□□ 0.51
CHMP1A-204ENST00000547687 HSD17B14Q9BPX1 270 aa18.26■□□□□ 0.51
CHMP1A-204ENST00000547687 ZHX1Q9UKY1 873 aaPredicted RBP18.26■□□□□ 0.51
CHMP1A-204ENST00000547687 SOWAHBA6NEL2 793 aa18.25■□□□□ 0.51
CHMP1A-204ENST00000547687 ZNF865P0CJ78 1059 aaPredicted RBP18.25■□□□□ 0.51
CHMP1A-204ENST00000547687 LRRC63Q05C16 580 aa18.25■□□□□ 0.51
CHMP1A-204ENST00000547687 TBC1D8BQ0IIM8 1120 aa18.25■□□□□ 0.51
CHMP1A-204ENST00000547687 CTTNQ14247 550 aaKnown RBP18.25■□□□□ 0.51
CHMP1A-204ENST00000547687 LRRC41Q15345 812 aa18.25■□□□□ 0.51
CHMP1A-204ENST00000547687 NOC4LQ9BVI4 516 aaKnown RBP18.25■□□□□ 0.51
CHMP1A-204ENST00000547687 ADGRG1Q9Y653 693 aa18.25■□□□□ 0.51
CHMP1A-204ENST00000547687 RRP9O43818 475 aaKnown RBP18.25■□□□□ 0.51
CHMP1A-204ENST00000547687 ATP9AO75110 1047 aa18.25■□□□□ 0.51
CHMP1A-204ENST00000547687 SLITRK3O94933 977 aa18.25■□□□□ 0.51
CHMP1A-204ENST00000547687 CYP11B2P19099 503 aa18.25■□□□□ 0.51
CHMP1A-204ENST00000547687 ARMCX2Q7L311 632 aa18.25■□□□□ 0.51
CHMP1A-204ENST00000547687 MYOCDQ8IZQ8 938 aa18.25■□□□□ 0.51
CHMP1A-204ENST00000547687 FAM133AQ8N9E0 248 aa18.25■□□□□ 0.51
CHMP1A-204ENST00000547687 DYDC2Q96IM9 177 aa18.25■□□□□ 0.51
CHMP1A-204ENST00000547687 TSG101Q99816 390 aa18.25■□□□□ 0.51
CHMP1A-204ENST00000547687 L2HGDHQ9H9P8 463 aa18.25■□□□□ 0.51
CHMP1A-204ENST00000547687 DNM3Q9UQ16 869 aa18.25■□□□□ 0.51
CHMP1A-204ENST00000547687 TTC26A0AVF1 554 aa18.24■□□□□ 0.51
CHMP1A-204ENST00000547687 EVI5O60447 810 aa18.24■□□□□ 0.51
CHMP1A-204ENST00000547687 PGK1P00558 417 aa18.24■□□□□ 0.51
CHMP1A-204ENST00000547687 SLC12A3P55017 1021 aa18.24■□□□□ 0.51
CHMP1A-204ENST00000547687 FAM26FQ5R3K3 315 aa18.24■□□□□ 0.51
CHMP1A-204ENST00000547687 CYP26C1Q6V0L0 522 aa18.24■□□□□ 0.51
CHMP1A-204ENST00000547687 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.24■□□□□ 0.51
CHMP1A-204ENST00000547687 MTERF4Q7Z6M4 381 aaKnown RBP18.24■□□□□ 0.51
CHMP1A-204ENST00000547687 TPH2Q8IWU9 490 aa18.24■□□□□ 0.51
CHMP1A-204ENST00000547687 GLIS3Q8NEA6 775 aa18.24■□□□□ 0.51
CHMP1A-204ENST00000547687 MAP7D2Q96T17 732 aa18.24■□□□□ 0.51
CHMP1A-204ENST00000547687 SENP6Q9GZR1 1112 aaPredicted RBP18.24■□□□□ 0.51
CHMP1A-204ENST00000547687 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.24■□□□□ 0.51
CHMP1A-204ENST00000547687 CAPN11Q9UMQ6 739 aa18.24■□□□□ 0.51
CHMP1A-204ENST00000547687 LUC7L2Q9Y383 392 aaKnown RBP18.24■□□□□ 0.51
CHMP1A-204ENST00000547687 LRRC37A2A6NM11 1700 aa18.24■□□□□ 0.51
CHMP1A-204ENST00000547687 NPHP3-ACAD11A0A0J9YXS1 232 aa18.23■□□□□ 0.51
CHMP1A-204ENST00000547687 ADCY6O43306 1168 aa18.23■□□□□ 0.51
CHMP1A-204ENST00000547687 RGS20O76081 388 aa18.23■□□□□ 0.51
CHMP1A-204ENST00000547687 SLU7O95391 586 aaKnown RBP18.23■□□□□ 0.51
CHMP1A-204ENST00000547687 IRX5P78411 483 aaPredicted RBP18.23■□□□□ 0.51
CHMP1A-204ENST00000547687 HSP90AA2PQ14568 343 aaPredicted RBP18.23■□□□□ 0.51
CHMP1A-204ENST00000547687 MIIPQ5JXC2 388 aa18.23■□□□□ 0.51
CHMP1A-204ENST00000547687 FOXR2Q6PJQ5 311 aa18.23■□□□□ 0.51
CHMP1A-204ENST00000547687 C7orf61Q8IZ16 206 aa18.23■□□□□ 0.51
CHMP1A-204ENST00000547687 OR8K1Q8NGG5 319 aa18.23■□□□□ 0.51
CHMP1A-204ENST00000547687 INPP4AQ96PE3 977 aaPredicted RBP18.23■□□□□ 0.51
CHMP1A-204ENST00000547687 NUP58Q9BVL2 599 aa18.23■□□□□ 0.51
CHMP1A-204ENST00000547687 TUFT1Q9NNX1 390 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms