RNA–Protein interactions for RNA: ENST00000547372.5

RBFOX1-208, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 5 BASIC

Gene RBFOX1, Length 3,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-208ENST00000547372 P2RX5Q93086 422 aa12.88□□□□□ -0.35
RBFOX1-208ENST00000547372 DUSP9Q99956 384 aaKnown RBP12.88□□□□□ -0.35
RBFOX1-208ENST00000547372 TBC1D10AQ9BXI6 508 aa12.88□□□□□ -0.35
RBFOX1-208ENST00000547372 A0A087X0T9 212 aa12.88□□□□□ -0.35
RBFOX1-208ENST00000547372 UNC5CO95185 931 aa12.88□□□□□ -0.35
RBFOX1-208ENST00000547372 BAG2O95816 211 aa12.88□□□□□ -0.35
RBFOX1-208ENST00000547372 FAM228BP0C875 321 aa12.88□□□□□ -0.35
RBFOX1-208ENST00000547372 CASP7P55210 303 aa12.88□□□□□ -0.35
RBFOX1-208ENST00000547372 SGSM1Q2NKQ1 1148 aa12.88□□□□□ -0.35
RBFOX1-208ENST00000547372 CERKLQ49MI3 558 aaPredicted RBP12.88□□□□□ -0.35
RBFOX1-208ENST00000547372 KHDC1Q4VXA5 237 aaKnown RBP12.88□□□□□ -0.35
RBFOX1-208ENST00000547372 FIGNQ5HY92 759 aa12.88□□□□□ -0.35
RBFOX1-208ENST00000547372 SFMBT2Q5VUG0 894 aa12.88□□□□□ -0.35
RBFOX1-208ENST00000547372 TAOK1Q7L7X3 1001 aa12.88□□□□□ -0.35
RBFOX1-208ENST00000547372 NELFCDQ8IXH7 590 aa12.88□□□□□ -0.35
RBFOX1-208ENST00000547372 SCYL3Q8IZE3 742 aa12.88□□□□□ -0.35
RBFOX1-208ENST00000547372 METTL13Q8N6R0 699 aa12.88□□□□□ -0.35
RBFOX1-208ENST00000547372 TLCD1Q96CP7 247 aa12.88□□□□□ -0.35
RBFOX1-208ENST00000547372 ERGIC2Q96RQ1 377 aa12.88□□□□□ -0.35
RBFOX1-208ENST00000547372 CYTH2Q99418 400 aa12.88□□□□□ -0.35
RBFOX1-208ENST00000547372 ADAM7Q9H2U9 754 aa12.88□□□□□ -0.35
RBFOX1-208ENST00000547372 CUEDC2Q9H467 287 aa12.88□□□□□ -0.35
RBFOX1-208ENST00000547372 DENND2DQ9H6A0 471 aaPredicted RBP12.88□□□□□ -0.35
RBFOX1-208ENST00000547372 PAIP2BQ9ULR5 123 aaKnown RBP12.88□□□□□ -0.35
RBFOX1-208ENST00000547372 JAG2Q9Y219 1238 aa12.88□□□□□ -0.35
RBFOX1-208ENST00000547372 RTCBQ9Y3I0 505 aaKnown RBP12.88□□□□□ -0.35
RBFOX1-208ENST00000547372 SLC4A7Q9Y6M7 1214 aa12.88□□□□□ -0.35
RBFOX1-208ENST00000547372 PJA2O43164 708 aa12.88□□□□□ -0.35
RBFOX1-208ENST00000547372 PLEKHA8P1O95397 391 aa12.88□□□□□ -0.35
RBFOX1-208ENST00000547372 ADD2P35612 726 aa12.88□□□□□ -0.35
RBFOX1-208ENST00000547372 TXKP42681 527 aa12.88□□□□□ -0.35
RBFOX1-208ENST00000547372 MCAMP43121 646 aa12.88□□□□□ -0.35
RBFOX1-208ENST00000547372 CBX3Q13185 183 aa12.88□□□□□ -0.35
RBFOX1-208ENST00000547372 CNGA2Q16280 664 aa12.88□□□□□ -0.35
RBFOX1-208ENST00000547372 LRRC36Q1X8D7 754 aa12.88□□□□□ -0.35
RBFOX1-208ENST00000547372 CEP70Q8NHQ1 597 aa12.88□□□□□ -0.35
RBFOX1-208ENST00000547372 FBXO25Q8TCJ0 367 aa12.88□□□□□ -0.35
RBFOX1-208ENST00000547372 ASAP3Q8TDY4 903 aa12.88□□□□□ -0.35
RBFOX1-208ENST00000547372 ANKS1AQ92625 1134 aa12.88□□□□□ -0.35
RBFOX1-208ENST00000547372 STMN2Q93045 179 aa12.88□□□□□ -0.35
RBFOX1-208ENST00000547372 CENPTQ96BT3 561 aa12.88□□□□□ -0.35
RBFOX1-208ENST00000547372 KIAA1683Q9H0B3 1180 aa12.88□□□□□ -0.35
RBFOX1-208ENST00000547372 MYLK2Q9H1R3 596 aa12.88□□□□□ -0.35
RBFOX1-208ENST00000547372 MKNK2Q9HBH9 465 aa12.88□□□□□ -0.35
RBFOX1-208ENST00000547372 TXLNGQ9NUQ3 528 aa12.88□□□□□ -0.35
RBFOX1-208ENST00000547372 DDX18Q9NVP1 670 aaKnown RBP12.88□□□□□ -0.35
RBFOX1-208ENST00000547372 CLIC5Q9NZA1 410 aa12.88□□□□□ -0.35
RBFOX1-208ENST00000547372 GFPT2O94808 682 aa12.87□□□□□ -0.35
RBFOX1-208ENST00000547372 IGBP1P78318 339 aa12.87□□□□□ -0.35
RBFOX1-208ENST00000547372 ZNF211Q13398 564 aaPredicted RBP12.87□□□□□ -0.35
RBFOX1-208ENST00000547372 LRRC41Q15345 812 aa12.87□□□□□ -0.35
RBFOX1-208ENST00000547372 CCDC84Q86UT8 332 aaPredicted RBP12.87□□□□□ -0.35
RBFOX1-208ENST00000547372 VPS36Q86VN1 386 aa12.87□□□□□ -0.35
RBFOX1-208ENST00000547372 MAP7D3Q8IWC1 876 aa12.87□□□□□ -0.35
RBFOX1-208ENST00000547372 SYNE4Q8N205 404 aa12.87□□□□□ -0.35
RBFOX1-208ENST00000547372 RNF25Q96BH1 459 aaPredicted RBP12.87□□□□□ -0.35
RBFOX1-208ENST00000547372 LRRC37BQ96QE4 947 aa12.87□□□□□ -0.35
RBFOX1-208ENST00000547372 PIH1D3Q9NQM4 214 aaKnown RBP12.87□□□□□ -0.35
RBFOX1-208ENST00000547372 LRCH1Q9Y2L9 728 aa12.87□□□□□ -0.35
RBFOX1-208ENST00000547372 CYP2D7A0A087X1C5 515 aa12.87□□□□□ -0.35
RBFOX1-208ENST00000547372 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.87□□□□□ -0.35
RBFOX1-208ENST00000547372 ACADSP16219 412 aa12.87□□□□□ -0.35
RBFOX1-208ENST00000547372 HNRNPH3P31942 346 aaKnown RBP12.87□□□□□ -0.35
RBFOX1-208ENST00000547372 VWA3BQ502W6 1294 aa12.87□□□□□ -0.35
RBFOX1-208ENST00000547372 MIIPQ5JXC2 388 aa12.87□□□□□ -0.35
RBFOX1-208ENST00000547372 ADAM33Q9BZ11 813 aa12.87□□□□□ -0.35
RBFOX1-208ENST00000547372 PTPN22Q9Y2R2 807 aa12.87□□□□□ -0.35
RBFOX1-208ENST00000547372 NR2E1Q9Y466 385 aa12.87□□□□□ -0.35
RBFOX1-208ENST00000547372 PXDNQ92626 1479 aa12.87□□□□□ -0.35
RBFOX1-208ENST00000547372 LCA5LO95447 670 aa12.87□□□□□ -0.35
RBFOX1-208ENST00000547372 UQCRFS1P1P0C7P4 283 aa12.87□□□□□ -0.35
RBFOX1-208ENST00000547372 VHLP40337 213 aa12.87□□□□□ -0.35
RBFOX1-208ENST00000547372 EVA1CP58658 441 aa12.87□□□□□ -0.35
RBFOX1-208ENST00000547372 MAP7Q14244 749 aa12.87□□□□□ -0.35
RBFOX1-208ENST00000547372 C6orf118Q5T5N4 469 aa12.87□□□□□ -0.35
RBFOX1-208ENST00000547372 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.87□□□□□ -0.35
RBFOX1-208ENST00000547372 CTNNBL1Q8WYA6 563 aaPredicted RBP12.87□□□□□ -0.35
RBFOX1-208ENST00000547372 HAUS1Q96CS2 278 aa12.87□□□□□ -0.35
RBFOX1-208ENST00000547372 SHISA4Q96DD7 197 aa12.87□□□□□ -0.35
RBFOX1-208ENST00000547372 MRRFQ96E11 262 aaKnown RBP12.87□□□□□ -0.35
RBFOX1-208ENST00000547372 TRAPPC9Q96Q05 1148 aa12.87□□□□□ -0.35
RBFOX1-208ENST00000547372 DAAM1Q9Y4D1 1078 aa12.87□□□□□ -0.35
RBFOX1-208ENST00000547372 MAGEA13PA6NCF6 341 aa12.86□□□□□ -0.35
RBFOX1-208ENST00000547372 FAM196BA6NMK8 535 aa12.86□□□□□ -0.35
RBFOX1-208ENST00000547372 KRT36O76013 467 aa12.86□□□□□ -0.35
RBFOX1-208ENST00000547372 TJP3O95049 919 aa12.86□□□□□ -0.35
RBFOX1-208ENST00000547372 AFPP02771 609 aaKnown RBP12.86□□□□□ -0.35
RBFOX1-208ENST00000547372 GSTA2P09210 222 aa12.86□□□□□ -0.35
RBFOX1-208ENST00000547372 RASSF2P50749 326 aa12.86□□□□□ -0.35
RBFOX1-208ENST00000547372 SFSWAPQ12872 951 aaKnown RBP12.86□□□□□ -0.35
RBFOX1-208ENST00000547372 NAB2Q15742 525 aa12.86□□□□□ -0.35
RBFOX1-208ENST00000547372 GALNTL6Q49A17 601 aa12.86□□□□□ -0.35
RBFOX1-208ENST00000547372 ECHDC2Q86YB7 292 aa12.86□□□□□ -0.35
RBFOX1-208ENST00000547372 PALB2Q86YC2 1186 aa12.86□□□□□ -0.35
RBFOX1-208ENST00000547372 DHTKD1Q96HY7 919 aaPredicted RBP12.86□□□□□ -0.35
RBFOX1-208ENST00000547372 TDRKHQ9Y2W6 561 aaKnown RBP12.86□□□□□ -0.35
RBFOX1-208ENST00000547372 NRXN3Q9Y4C0 1643 aa12.86□□□□□ -0.35
RBFOX1-208ENST00000547372 MAGEB3O15480 346 aa12.86□□□□□ -0.35
RBFOX1-208ENST00000547372 TMCC1O94876 653 aa12.86□□□□□ -0.35
RBFOX1-208ENST00000547372 EIF4BP23588 611 aaKnown RBP12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms