RNA–Protein interactions for RNA: ENST00000546997.1

BRF1-208, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 2

Gene BRF1, Length 1,999 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-208ENST00000546997 KIAA1024Q9UPX6 916 aa18.14■□□□□ 0.49
BRF1-208ENST00000546997 CTNND2Q9UQB3 1225 aa18.14■□□□□ 0.49
BRF1-208ENST00000546997 JRKLQ9Y4A0 524 aa18.14■□□□□ 0.49
BRF1-208ENST00000546997 TELO2Q9Y4R8 837 aa18.14■□□□□ 0.49
BRF1-208ENST00000546997 KDM3AQ9Y4C1 1321 aa18.14■□□□□ 0.49
BRF1-208ENST00000546997 MYH9P35579 1960 aaKnown RBP18.14■□□□□ 0.49
BRF1-208ENST00000546997 CTAGE9A4FU28 777 aa18.13■□□□□ 0.49
BRF1-208ENST00000546997 SORBS3O60504 671 aa18.13■□□□□ 0.49
BRF1-208ENST00000546997 RPA1P27694 616 aa18.13■□□□□ 0.49
BRF1-208ENST00000546997 CTGFP29279 349 aa18.13■□□□□ 0.49
BRF1-208ENST00000546997 ICAM3P32942 547 aa18.13■□□□□ 0.49
BRF1-208ENST00000546997 CASP8Q14790 479 aa18.13■□□□□ 0.49
BRF1-208ENST00000546997 ARMCX2Q7L311 632 aa18.13■□□□□ 0.49
BRF1-208ENST00000546997 DPP9Q86TI2 863 aa18.13■□□□□ 0.49
BRF1-208ENST00000546997 CDHR1Q96JP9 859 aa18.13■□□□□ 0.49
BRF1-208ENST00000546997 VEGFBP49765 207 aa18.13■□□□□ 0.49
BRF1-208ENST00000546997 GYS2P54840 703 aa18.13■□□□□ 0.49
BRF1-208ENST00000546997 CTTNQ14247 550 aaKnown RBP18.13■□□□□ 0.49
BRF1-208ENST00000546997 MCM6Q14566 821 aa18.13■□□□□ 0.49
BRF1-208ENST00000546997 PTPN21Q16825 1174 aa18.13■□□□□ 0.49
BRF1-208ENST00000546997 MORN1Q5T089 497 aa18.13■□□□□ 0.49
BRF1-208ENST00000546997 MPHOSPH6Q99547 160 aaKnown RBP18.13■□□□□ 0.49
BRF1-208ENST00000546997 MRPL44Q9H9J2 332 aaKnown RBP18.13■□□□□ 0.49
BRF1-208ENST00000546997 ABCB6Q9NP58 842 aa18.13■□□□□ 0.49
BRF1-208ENST00000546997 GDAQ9Y2T3 454 aa18.13■□□□□ 0.49
BRF1-208ENST00000546997 SLC15A5A6NIM6 579 aa18.12■□□□□ 0.49
BRF1-208ENST00000546997 B4DLN1 442 aa18.12■□□□□ 0.49
BRF1-208ENST00000546997 SLITRK3O94933 977 aa18.12■□□□□ 0.49
BRF1-208ENST00000546997 RHOBTB3O94955 611 aa18.12■□□□□ 0.49
BRF1-208ENST00000546997 ALDH1A1P00352 501 aa18.12■□□□□ 0.49
BRF1-208ENST00000546997 PRCPP42785 496 aa18.12■□□□□ 0.49
BRF1-208ENST00000546997 PAK1Q13153 545 aa18.12■□□□□ 0.49
BRF1-208ENST00000546997 MIER3Q7Z3K6 550 aa18.12■□□□□ 0.49
BRF1-208ENST00000546997 LARP4BQ92615 738 aaKnown RBP18.12■□□□□ 0.49
BRF1-208ENST00000546997 RAD54LQ92698 747 aa18.12■□□□□ 0.49
BRF1-208ENST00000546997 DYDC2Q96IM9 177 aa18.12■□□□□ 0.49
BRF1-208ENST00000546997 NT5C3AQ9H0P0 336 aa18.12■□□□□ 0.49
BRF1-208ENST00000546997 WRAP73Q9P2S5 460 aaPredicted RBP18.12■□□□□ 0.49
BRF1-208ENST00000546997 STK17AQ9UEE5 414 aa18.12■□□□□ 0.49
BRF1-208ENST00000546997 FAN1Q9Y2M0 1017 aa18.12■□□□□ 0.49
BRF1-208ENST00000546997 LOXHD1Q8IVV2 1947 aa18.12■□□□□ 0.49
BRF1-208ENST00000546997 CTAGE15A4D2H0 777 aa18.11■□□□□ 0.49
BRF1-208ENST00000546997 ASB14A6NK59 587 aa18.11■□□□□ 0.49
BRF1-208ENST00000546997 E9PMD0 336 aa18.11■□□□□ 0.49
BRF1-208ENST00000546997 CTAGE8P0CG41 777 aa18.11■□□□□ 0.49
BRF1-208ENST00000546997 UBA1P22314 1058 aaKnown RBP18.11■□□□□ 0.49
BRF1-208ENST00000546997 ADKP55263 362 aaKnown RBP18.11■□□□□ 0.49
BRF1-208ENST00000546997 PSMC6P62333 389 aa18.11■□□□□ 0.49
BRF1-208ENST00000546997 SWT1Q5T5J6 900 aaKnown RBP18.11■□□□□ 0.49
BRF1-208ENST00000546997 CTAGE6Q86UF2 777 aa18.11■□□□□ 0.49
BRF1-208ENST00000546997 CTAGE4Q8IX94 777 aa18.11■□□□□ 0.49
BRF1-208ENST00000546997 NPLOC4Q8TAT6 608 aa18.11■□□□□ 0.49
BRF1-208ENST00000546997 NELFBQ8WX92 580 aa18.11■□□□□ 0.49
BRF1-208ENST00000546997 MAML3Q96JK9 1138 aa18.11■□□□□ 0.49
BRF1-208ENST00000546997 CTAGE1Q96RT6 745 aa18.11■□□□□ 0.49
BRF1-208ENST00000546997 PNKPQ96T60 521 aa18.11■□□□□ 0.49
BRF1-208ENST00000546997 C7orf25Q9BPX7 421 aa18.11■□□□□ 0.49
BRF1-208ENST00000546997 POLR3CQ9BUI4 534 aaPredicted RBP18.11■□□□□ 0.49
BRF1-208ENST00000546997 JPH1Q9HDC5 661 aaPredicted RBP18.11■□□□□ 0.49
BRF1-208ENST00000546997 LOC102724159A0A0B4J2E5 919 aa18.11■□□□□ 0.49
BRF1-208ENST00000546997 NFASCO94856 1347 aa18.11■□□□□ 0.49
BRF1-208ENST00000546997 ARIH2O95376 493 aa18.11■□□□□ 0.49
BRF1-208ENST00000546997 SP4Q02446 784 aa18.11■□□□□ 0.49
BRF1-208ENST00000546997 GOLGA8FQ08AF8 430 aa18.11■□□□□ 0.49
BRF1-208ENST00000546997 GOLGA8DPQ0D2H9 430 aa18.11■□□□□ 0.49
BRF1-208ENST00000546997 PWP2Q15269 919 aaKnown RBP18.11■□□□□ 0.49
BRF1-208ENST00000546997 EPHA7Q15375 998 aa18.11■□□□□ 0.49
BRF1-208ENST00000546997 LRRC31Q6UY01 552 aa18.11■□□□□ 0.49
BRF1-208ENST00000546997 ADSSL1Q8N142 457 aa18.11■□□□□ 0.49
BRF1-208ENST00000546997 BANK1Q8NDB2 785 aa18.11■□□□□ 0.49
BRF1-208ENST00000546997 TRIM9Q9C026 710 aa18.11■□□□□ 0.49
BRF1-208ENST00000546997 SAMM50Q9Y512 469 aa18.11■□□□□ 0.49
BRF1-208ENST00000546997 ITIH6Q6UXX5 1313 aa18.1■□□□□ 0.49
BRF1-208ENST00000546997 A0A087WUV0 522 aaPredicted RBP18.1■□□□□ 0.49
BRF1-208ENST00000546997 SLC26A4O43511 780 aa18.1■□□□□ 0.49
BRF1-208ENST00000546997 KRT76Q01546 638 aa18.1■□□□□ 0.49
BRF1-208ENST00000546997 MAP9Q49MG5 647 aa18.1■□□□□ 0.49
BRF1-208ENST00000546997 CYFIP1Q7L576 1253 aa18.1■□□□□ 0.49
BRF1-208ENST00000546997 ZNF467Q7Z7K2 595 aaPredicted RBP18.1■□□□□ 0.49
BRF1-208ENST00000546997 PPFIBP1Q86W92 1011 aa18.1■□□□□ 0.49
BRF1-208ENST00000546997 TPH2Q8IWU9 490 aa18.1■□□□□ 0.49
BRF1-208ENST00000546997 GIMAP8Q8ND71 665 aaPredicted RBP18.1■□□□□ 0.49
BRF1-208ENST00000546997 LXNQ9BS40 222 aa18.1■□□□□ 0.49
BRF1-208ENST00000546997 ARHGAP39Q9C0H5 1083 aa18.1■□□□□ 0.49
BRF1-208ENST00000546997 PDGFCQ9NRA1 345 aa18.1■□□□□ 0.49
BRF1-208ENST00000546997 MAPK8IP1Q9UQF2 711 aa18.1■□□□□ 0.49
BRF1-208ENST00000546997 TNPO2O14787 897 aaKnown RBP18.1■□□□□ 0.49
BRF1-208ENST00000546997 PBX1P40424 430 aa18.1■□□□□ 0.49
BRF1-208ENST00000546997 AMPD3Q01432 767 aa18.1■□□□□ 0.49
BRF1-208ENST00000546997 MAP2K5Q13163 448 aa18.1■□□□□ 0.49
BRF1-208ENST00000546997 DNAJC21Q5F1R6 531 aaKnown RBP18.1■□□□□ 0.49
BRF1-208ENST00000546997 TMEM63BQ5T3F8 832 aa18.1■□□□□ 0.49
BRF1-208ENST00000546997 CNGA4Q8IV77 575 aa18.1■□□□□ 0.49
BRF1-208ENST00000546997 REM2Q8IYK8 340 aaPredicted RBP18.1■□□□□ 0.49
BRF1-208ENST00000546997 NAPGQ99747 312 aaPredicted RBP18.1■□□□□ 0.49
BRF1-208ENST00000546997 NCAPGQ9BPX3 1015 aa18.1■□□□□ 0.49
BRF1-208ENST00000546997 SENP7Q9BQF6 1050 aa18.1■□□□□ 0.49
BRF1-208ENST00000546997 TUFT1Q9NNX1 390 aa18.1■□□□□ 0.49
BRF1-208ENST00000546997 SLC9A2Q9UBY0 812 aa18.1■□□□□ 0.49
BRF1-208ENST00000546997 STK24Q9Y6E0 443 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms