RNA–Protein interactions for RNA: ENST00000546947.5

CCDC38-205, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS ALT2 TSL 4

Gene CCDC38, Length 559 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-205ENST00000546947 CEP89Q96ST8 783 aa16.58■□□□□ 0.24
CCDC38-205ENST00000546947 ERVK-5Q9HDB9 667 aa16.58■□□□□ 0.24
CCDC38-205ENST00000546947 PCDHA12Q9UN75 941 aa16.58■□□□□ 0.24
CCDC38-205ENST00000546947 AKT3Q9Y243 479 aa16.58■□□□□ 0.24
CCDC38-205ENST00000546947 GINS2Q9Y248 185 aa16.58■□□□□ 0.24
CCDC38-205ENST00000546947 PPME1Q9Y570 386 aa16.58■□□□□ 0.24
CCDC38-205ENST00000546947 COL4A4P53420 1690 aaPredicted RBP16.58■□□□□ 0.24
CCDC38-205ENST00000546947 ARID2Q68CP9 1835 aa16.58■□□□□ 0.24
CCDC38-205ENST00000546947 LINC01553A4QN01 128 aa16.57■□□□□ 0.24
CCDC38-205ENST00000546947 DDX11L8A8MPP1 907 aa16.57■□□□□ 0.24
CCDC38-205ENST00000546947 WNT7AO00755 349 aa16.57■□□□□ 0.24
CCDC38-205ENST00000546947 GPR182O15218 404 aa16.57■□□□□ 0.24
CCDC38-205ENST00000546947 GPR32O75388 356 aa16.57■□□□□ 0.24
CCDC38-205ENST00000546947 RPS6KA5O75582 802 aa16.57■□□□□ 0.24
CCDC38-205ENST00000546947 NFX1Q12986 1120 aaKnown RBP16.57■□□□□ 0.24
CCDC38-205ENST00000546947 ORC2Q13416 577 aaPredicted RBP16.57■□□□□ 0.24
CCDC38-205ENST00000546947 GNL2Q13823 731 aaKnown RBP16.57■□□□□ 0.24
CCDC38-205ENST00000546947 KIZQ2M2Z5 673 aa16.57■□□□□ 0.24
CCDC38-205ENST00000546947 ANO5Q75V66 913 aa16.57■□□□□ 0.24
CCDC38-205ENST00000546947 C4orf19Q8IY42 314 aa16.57■□□□□ 0.24
CCDC38-205ENST00000546947 SLC17A8Q8NDX2 589 aa16.57■□□□□ 0.24
CCDC38-205ENST00000546947 ARNTL2Q8WYA1 636 aa16.57■□□□□ 0.24
CCDC38-205ENST00000546947 MTMR9Q96QG7 549 aa16.57■□□□□ 0.24
CCDC38-205ENST00000546947 YME1L1Q96TA2 773 aa16.57■□□□□ 0.24
CCDC38-205ENST00000546947 OSMRQ99650 979 aa16.57■□□□□ 0.24
CCDC38-205ENST00000546947 JPH2Q9BR39 696 aaPredicted RBP16.57■□□□□ 0.24
CCDC38-205ENST00000546947 TTC12Q9H892 705 aaPredicted RBP16.57■□□□□ 0.24
CCDC38-205ENST00000546947 CERS4Q9HA82 394 aa16.57■□□□□ 0.24
CCDC38-205ENST00000546947 SUGCTQ9HAC7 445 aa16.57■□□□□ 0.24
CCDC38-205ENST00000546947 CDHR5Q9HBB8 845 aa16.57■□□□□ 0.24
CCDC38-205ENST00000546947 NOC2LQ9Y3T9 749 aaKnown RBP16.57■□□□□ 0.24
CCDC38-205ENST00000546947 TRANK1O15050 2925 aa16.56■□□□□ 0.24
CCDC38-205ENST00000546947 IGKV6-21A0A0C4DH24 114 aa16.56■□□□□ 0.24
CCDC38-205ENST00000546947 CD2BP2O95400 341 aaKnown RBP16.56■□□□□ 0.24
CCDC38-205ENST00000546947 IGFBP4P22692 258 aa16.56■□□□□ 0.24
CCDC38-205ENST00000546947 NLRP11P59045 1033 aaKnown RBP16.56■□□□□ 0.24
CCDC38-205ENST00000546947 ERVK-21P61565 698 aa16.56■□□□□ 0.24
CCDC38-205ENST00000546947 CDC42EP1Q00587 391 aa16.56■□□□□ 0.24
CCDC38-205ENST00000546947 TMEM266Q2M3C6 531 aa16.56■□□□□ 0.24
CCDC38-205ENST00000546947 NOSTRINQ8IVI9 506 aa16.56■□□□□ 0.24
CCDC38-205ENST00000546947 NEK9Q8TD19 979 aa16.56■□□□□ 0.24
CCDC38-205ENST00000546947 TMEM40Q8WWA1 233 aa16.56■□□□□ 0.24
CCDC38-205ENST00000546947 LINC01599Q8WXQ3 324 aa16.56■□□□□ 0.24
CCDC38-205ENST00000546947 DYDC2Q96IM9 177 aa16.56■□□□□ 0.24
CCDC38-205ENST00000546947 SAMD11Q96NU1 681 aa16.56■□□□□ 0.24
CCDC38-205ENST00000546947 PPP1R16BQ96T49 567 aa16.56■□□□□ 0.24
CCDC38-205ENST00000546947 LXNQ9BS40 222 aa16.56■□□□□ 0.24
CCDC38-205ENST00000546947 BACH2Q9BYV9 841 aa16.56■□□□□ 0.24
CCDC38-205ENST00000546947 TSPYL2Q9H2G4 693 aaPredicted RBP16.56■□□□□ 0.24
CCDC38-205ENST00000546947 TMEM150BA6NC51 233 aa16.55■□□□□ 0.24
CCDC38-205ENST00000546947 EPOPA6NHQ4 379 aa16.55■□□□□ 0.24
CCDC38-205ENST00000546947 MAFO75444 373 aaPredicted RBP16.55■□□□□ 0.24
CCDC38-205ENST00000546947 ATP2B1P20020 1258 aa16.55■□□□□ 0.24
CCDC38-205ENST00000546947 POU3F3P20264 500 aaPredicted RBP16.55■□□□□ 0.24
CCDC38-205ENST00000546947 U2AF2P26368 475 aaKnown RBP eCLIP16.55■□□□□ 0.24
CCDC38-205ENST00000546947 MCM7P33993 719 aa16.55■□□□□ 0.24
CCDC38-205ENST00000546947 TXKP42681 527 aa16.55■□□□□ 0.24
CCDC38-205ENST00000546947 TRAPPC10P48553 1259 aa16.55■□□□□ 0.24
CCDC38-205ENST00000546947 DNM2P50570 870 aa16.55■□□□□ 0.24
CCDC38-205ENST00000546947 OTUD6AQ7L8S5 288 aa16.55■□□□□ 0.24
CCDC38-205ENST00000546947 RTN4RL1Q86UN2 441 aaPredicted RBP16.55■□□□□ 0.24
CCDC38-205ENST00000546947 FAM228AQ86W67 206 aa16.55■□□□□ 0.24
CCDC38-205ENST00000546947 EXOC8Q8IYI6 725 aa16.55■□□□□ 0.24
CCDC38-205ENST00000546947 EIF2AK1Q9BQI3 630 aaKnown RBP16.55■□□□□ 0.24
CCDC38-205ENST00000546947 ADAMTS10Q9H324 1103 aa16.55■□□□□ 0.24
CCDC38-205ENST00000546947 TMX1Q9H3N1 280 aa16.55■□□□□ 0.24
CCDC38-205ENST00000546947 ZSWIM4Q9H7M6 989 aa16.55■□□□□ 0.24
CCDC38-205ENST00000546947 CYP26B1Q9NR63 512 aa16.55■□□□□ 0.24
CCDC38-205ENST00000546947 WRAP73Q9P2S5 460 aaPredicted RBP16.55■□□□□ 0.24
CCDC38-205ENST00000546947 NOL7Q9UMY1 257 aaKnown RBP16.55■□□□□ 0.24
CCDC38-205ENST00000546947 ST3GAL5Q9UNP4 418 aa16.55■□□□□ 0.24
CCDC38-205ENST00000546947 UNC80Q8N2C7 3258 aa16.55■□□□□ 0.24
CCDC38-205ENST00000546947 RFXAPO00287 272 aa16.54■□□□□ 0.24
CCDC38-205ENST00000546947 GTPBP6O43824 516 aaPredicted RBP16.54■□□□□ 0.24
CCDC38-205ENST00000546947 STAG3L1P0CL83 205 aa16.54■□□□□ 0.24
CCDC38-205ENST00000546947 GPC3P51654 580 aa16.54■□□□□ 0.24
CCDC38-205ENST00000546947 PLA2G4FQ68DD2 849 aa16.54■□□□□ 0.24
CCDC38-205ENST00000546947 SPRED2Q7Z698 418 aa16.54■□□□□ 0.24
CCDC38-205ENST00000546947 NPAS4Q8IUM7 802 aa16.54■□□□□ 0.24
CCDC38-205ENST00000546947 ZNF689Q96CS4 500 aaPredicted RBP16.54■□□□□ 0.24
CCDC38-205ENST00000546947 CEP170P1Q96L14 293 aa16.54■□□□□ 0.24
CCDC38-205ENST00000546947 SH2D3AQ9BRG2 576 aa16.54■□□□□ 0.24
CCDC38-205ENST00000546947 TMEM60Q9H2L4 133 aa16.54■□□□□ 0.24
CCDC38-205ENST00000546947 RC3H2Q9HBD1 1191 aaKnown RBP16.54■□□□□ 0.24
CCDC38-205ENST00000546947 C1orf112Q9NSG2 853 aa16.54■□□□□ 0.24
CCDC38-205ENST00000546947 RGL1Q9NZL6 768 aa16.54■□□□□ 0.24
CCDC38-205ENST00000546947 REV3LO60673 3130 aa16.54■□□□□ 0.24
CCDC38-205ENST00000546947 ADGRA3Q8IWK6 1321 aa16.53■□□□□ 0.24
CCDC38-205ENST00000546947 GAS2O43903 313 aaKnown RBP16.53■□□□□ 0.24
CCDC38-205ENST00000546947 SLITRK3O94933 977 aa16.53■□□□□ 0.24
CCDC38-205ENST00000546947 LYPLA2O95372 231 aa16.53■□□□□ 0.24
CCDC38-205ENST00000546947 EIF4BP23588 611 aaKnown RBP16.53■□□□□ 0.24
CCDC38-205ENST00000546947 YWHABP31946 246 aaKnown RBP16.53■□□□□ 0.24
CCDC38-205ENST00000546947 SARSP49591 514 aaKnown RBP16.53■□□□□ 0.24
CCDC38-205ENST00000546947 NPEPPSP55786 919 aa16.53■□□□□ 0.24
CCDC38-205ENST00000546947 CYP4A11Q02928 519 aa16.53■□□□□ 0.24
CCDC38-205ENST00000546947 CTTNQ14247 550 aaKnown RBP16.53■□□□□ 0.24
CCDC38-205ENST00000546947 TTC38Q5R3I4 469 aa16.53■□□□□ 0.24
CCDC38-205ENST00000546947 CRIPAKQ8N1N5 446 aa16.53■□□□□ 0.24
CCDC38-205ENST00000546947 SLC7A3Q8WY07 619 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms