RNA–Protein interactions for RNA: ENST00000546898.1

DDX54-204, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 479 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-204ENST00000546898 MAFAQ8NHW3 353 aaPredicted RBP17.82■□□□□ 0.44
DDX54-204ENST00000546898 SP7Q8TDD2 431 aaPredicted RBP17.82■□□□□ 0.44
DDX54-204ENST00000546898 MTMR9Q96QG7 549 aa17.82■□□□□ 0.44
DDX54-204ENST00000546898 CEP89Q96ST8 783 aa17.82■□□□□ 0.44
DDX54-204ENST00000546898 TTC12Q9H892 705 aaPredicted RBP17.82■□□□□ 0.44
DDX54-204ENST00000546898 GINS2Q9Y248 185 aa17.82■□□□□ 0.44
DDX54-204ENST00000546898 IGKV6-21A0A0C4DH24 114 aa17.81■□□□□ 0.44
DDX54-204ENST00000546898 DDX11L8A8MPP1 907 aa17.81■□□□□ 0.44
DDX54-204ENST00000546898 ENPP3O14638 875 aa17.81■□□□□ 0.44
DDX54-204ENST00000546898 GPR32O75388 356 aa17.81■□□□□ 0.44
DDX54-204ENST00000546898 ARHGEF15O94989 841 aa17.81■□□□□ 0.44
DDX54-204ENST00000546898 VTNP04004 478 aa17.81■□□□□ 0.44
DDX54-204ENST00000546898 MCM7P33993 719 aa17.81■□□□□ 0.44
DDX54-204ENST00000546898 CDC42EP1Q00587 391 aa17.81■□□□□ 0.44
DDX54-204ENST00000546898 EXOC8Q8IYI6 725 aa17.81■□□□□ 0.44
DDX54-204ENST00000546898 TMEM40Q8WWA1 233 aa17.81■□□□□ 0.44
DDX54-204ENST00000546898 OSMRQ99650 979 aa17.81■□□□□ 0.44
DDX54-204ENST00000546898 ZSWIM4Q9H7M6 989 aa17.81■□□□□ 0.44
DDX54-204ENST00000546898 SUGCTQ9HAC7 445 aa17.81■□□□□ 0.44
DDX54-204ENST00000546898 ERVK-5Q9HDB9 667 aa17.81■□□□□ 0.44
DDX54-204ENST00000546898 NOC2LQ9Y3T9 749 aaKnown RBP17.81■□□□□ 0.44
DDX54-204ENST00000546898 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.81■□□□□ 0.44
DDX54-204ENST00000546898 GTF3C3Q9Y5Q9 886 aa17.81■□□□□ 0.44
DDX54-204ENST00000546898 COL6A3P12111 3177 aa17.81■□□□□ 0.44
DDX54-204ENST00000546898 CHD7Q9P2D1 2997 aa17.81■□□□□ 0.44
DDX54-204ENST00000546898 TRANK1O15050 2925 aa17.8■□□□□ 0.44
DDX54-204ENST00000546898 LINC01553A4QN01 128 aa17.8■□□□□ 0.44
DDX54-204ENST00000546898 TMEM150BA6NC51 233 aa17.8■□□□□ 0.44
DDX54-204ENST00000546898 RBAK-RBAKDNI3L0D1 243 aa17.8■□□□□ 0.44
DDX54-204ENST00000546898 GPR182O15218 404 aa17.8■□□□□ 0.44
DDX54-204ENST00000546898 MAFO75444 373 aaPredicted RBP17.8■□□□□ 0.44
DDX54-204ENST00000546898 UPP2O95045 317 aa17.8■□□□□ 0.44
DDX54-204ENST00000546898 ATP2B1P20020 1258 aa17.8■□□□□ 0.44
DDX54-204ENST00000546898 GJB2P29033 226 aa17.8■□□□□ 0.44
DDX54-204ENST00000546898 TXKP42681 527 aa17.8■□□□□ 0.44
DDX54-204ENST00000546898 DNM2P50570 870 aa17.8■□□□□ 0.44
DDX54-204ENST00000546898 NLRP11P59045 1033 aaKnown RBP17.8■□□□□ 0.44
DDX54-204ENST00000546898 TTC38Q5R3I4 469 aa17.8■□□□□ 0.44
DDX54-204ENST00000546898 OTUD6AQ7L8S5 288 aa17.8■□□□□ 0.44
DDX54-204ENST00000546898 LINC01599Q8WXQ3 324 aa17.8■□□□□ 0.44
DDX54-204ENST00000546898 DYDC2Q96IM9 177 aa17.8■□□□□ 0.44
DDX54-204ENST00000546898 TGS1Q96RS0 853 aaKnown RBP17.8■□□□□ 0.44
DDX54-204ENST00000546898 YME1L1Q96TA2 773 aa17.8■□□□□ 0.44
DDX54-204ENST00000546898 TSPYL2Q9H2G4 693 aaPredicted RBP17.8■□□□□ 0.44
DDX54-204ENST00000546898 CDHR5Q9HBB8 845 aa17.8■□□□□ 0.44
DDX54-204ENST00000546898 CYP26B1Q9NR63 512 aa17.8■□□□□ 0.44
DDX54-204ENST00000546898 LYPLA2O95372 231 aa17.79■□□□□ 0.44
DDX54-204ENST00000546898 YWHABP31946 246 aaKnown RBP17.79■□□□□ 0.44
DDX54-204ENST00000546898 GPC3P51654 580 aa17.79■□□□□ 0.44
DDX54-204ENST00000546898 NFX1Q12986 1120 aaKnown RBP17.79■□□□□ 0.44
DDX54-204ENST00000546898 TMEM266Q2M3C6 531 aa17.79■□□□□ 0.44
DDX54-204ENST00000546898 PLA2G4FQ68DD2 849 aa17.79■□□□□ 0.44
DDX54-204ENST00000546898 ARNTL2Q8WYA1 636 aa17.79■□□□□ 0.44
DDX54-204ENST00000546898 SAMD11Q96NU1 681 aa17.79■□□□□ 0.44
DDX54-204ENST00000546898 PPP1R16BQ96T49 567 aa17.79■□□□□ 0.44
DDX54-204ENST00000546898 EIF2AK1Q9BQI3 630 aaKnown RBP17.79■□□□□ 0.44
DDX54-204ENST00000546898 TMEM60Q9H2L4 133 aa17.79■□□□□ 0.44
DDX54-204ENST00000546898 ADAMTS10Q9H324 1103 aa17.79■□□□□ 0.44
DDX54-204ENST00000546898 RGL1Q9NZL6 768 aa17.79■□□□□ 0.44
DDX54-204ENST00000546898 WRAP73Q9P2S5 460 aaPredicted RBP17.79■□□□□ 0.44
DDX54-204ENST00000546898 SMC3Q9UQE7 1217 aa17.79■□□□□ 0.44
DDX54-204ENST00000546898 KIAA1671Q9BY89 1806 aa17.78■□□□□ 0.44
DDX54-204ENST00000546898 GAS2O43903 313 aaKnown RBP17.78■□□□□ 0.44
DDX54-204ENST00000546898 SLITRK3O94933 977 aa17.78■□□□□ 0.44
DDX54-204ENST00000546898 OR52Z1P0C646 297 aa17.78■□□□□ 0.44
DDX54-204ENST00000546898 RFC5P40937 340 aa17.78■□□□□ 0.44
DDX54-204ENST00000546898 ERVK-21P61565 698 aa17.78■□□□□ 0.44
DDX54-204ENST00000546898 CYP4A11Q02928 519 aa17.78■□□□□ 0.44
DDX54-204ENST00000546898 ADGRE1Q14246 886 aa17.78■□□□□ 0.44
DDX54-204ENST00000546898 FAM228AQ86W67 206 aa17.78■□□□□ 0.44
DDX54-204ENST00000546898 NPAS4Q8IUM7 802 aa17.78■□□□□ 0.44
DDX54-204ENST00000546898 SLC7A3Q8WY07 619 aa17.78■□□□□ 0.44
DDX54-204ENST00000546898 CEP170P1Q96L14 293 aa17.78■□□□□ 0.44
DDX54-204ENST00000546898 HSD17B14Q9BPX1 270 aa17.78■□□□□ 0.44
DDX54-204ENST00000546898 SH2D3AQ9BRG2 576 aa17.78■□□□□ 0.44
DDX54-204ENST00000546898 TMX1Q9H3N1 280 aa17.78■□□□□ 0.44
DDX54-204ENST00000546898 CERS4Q9HA82 394 aa17.78■□□□□ 0.44
DDX54-204ENST00000546898 RC3H2Q9HBD1 1191 aaKnown RBP17.78■□□□□ 0.44
DDX54-204ENST00000546898 C1orf112Q9NSG2 853 aa17.78■□□□□ 0.44
DDX54-204ENST00000546898 RNF216Q9NWF9 866 aaPredicted RBP17.78■□□□□ 0.44
DDX54-204ENST00000546898 ST3GAL5Q9UNP4 418 aa17.78■□□□□ 0.44
DDX54-204ENST00000546898 FNDC1Q4ZHG4 1894 aaPredicted RBP17.78■□□□□ 0.44
DDX54-204ENST00000546898 ADGRA3Q8IWK6 1321 aa17.77■□□□□ 0.44
DDX54-204ENST00000546898 POTEMA6NI47 508 aa17.77■□□□□ 0.44
DDX54-204ENST00000546898 STAG3L1P0CL83 205 aa17.77■□□□□ 0.44
DDX54-204ENST00000546898 POU3F3P20264 500 aaPredicted RBP17.77■□□□□ 0.44
DDX54-204ENST00000546898 EIF4BP23588 611 aaKnown RBP17.77■□□□□ 0.44
DDX54-204ENST00000546898 POLGP54098 1239 aaPredicted RBP17.77■□□□□ 0.44
DDX54-204ENST00000546898 NPEPPSP55786 919 aa17.77■□□□□ 0.44
DDX54-204ENST00000546898 CTTNQ14247 550 aaKnown RBP17.77■□□□□ 0.44
DDX54-204ENST00000546898 ZNF174Q15697 407 aa17.77■□□□□ 0.44
DDX54-204ENST00000546898 RTN4RL1Q86UN2 441 aaPredicted RBP17.77■□□□□ 0.44
DDX54-204ENST00000546898 ZNF410Q86VK4 478 aa17.77■□□□□ 0.44
DDX54-204ENST00000546898 TPH2Q8IWU9 490 aa17.77■□□□□ 0.44
DDX54-204ENST00000546898 NLRP7Q8WX94 980 aa17.77■□□□□ 0.44
DDX54-204ENST00000546898 SCLT1Q96NL6 688 aa17.77■□□□□ 0.44
DDX54-204ENST00000546898 DHX33Q9H6R0 707 aaKnown RBP17.77■□□□□ 0.44
DDX54-204ENST00000546898 PRRC2BQ5JSZ5 2229 aaKnown RBP17.77■□□□□ 0.44
DDX54-204ENST00000546898 DENND3A2RUS2 1198 aa17.76■□□□□ 0.43
DDX54-204ENST00000546898 EPOPA6NHQ4 379 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms