RNA–Protein interactions for RNA: ENST00000546803.5

CCDC38-203, Transcript of coiled-coil domain containing 38, humanhuman

TSL 4

Gene CCDC38, Length 511 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-203ENST00000546803 CDY2AQ9Y6F7 541 aa18.76■□□□□ 0.59
CCDC38-203ENST00000546803 SQORQ9Y6N5 450 aa18.76■□□□□ 0.59
CCDC38-203ENST00000546803 KDM3AQ9Y4C1 1321 aa18.75■□□□□ 0.59
CCDC38-203ENST00000546803 DGAT1O75907 488 aa18.75■□□□□ 0.59
CCDC38-203ENST00000546803 MARCKSP29966 332 aaPredicted RBP18.75■□□□□ 0.59
CCDC38-203ENST00000546803 CDC25AP30304 524 aa18.75■□□□□ 0.59
CCDC38-203ENST00000546803 UBA7P41226 1012 aa18.75■□□□□ 0.59
CCDC38-203ENST00000546803 NUCB2P80303 420 aa18.75■□□□□ 0.59
CCDC38-203ENST00000546803 MBTPS1Q14703 1052 aa18.75■□□□□ 0.59
CCDC38-203ENST00000546803 HYIQ5T013 277 aa18.75■□□□□ 0.59
CCDC38-203ENST00000546803 ZNF579Q8NAF0 562 aaKnown RBP18.75■□□□□ 0.59
CCDC38-203ENST00000546803 USP38Q8NB14 1042 aa18.75■□□□□ 0.59
CCDC38-203ENST00000546803 LINC00301Q8NCQ3 95 aa18.75■□□□□ 0.59
CCDC38-203ENST00000546803 HERVK_113Q902F9 699 aa18.75■□□□□ 0.59
CCDC38-203ENST00000546803 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.75■□□□□ 0.59
CCDC38-203ENST00000546803 MMTAG2Q9BU76 263 aaKnown RBP18.75■□□□□ 0.59
CCDC38-203ENST00000546803 NT5C3AQ9H0P0 336 aa18.75■□□□□ 0.59
CCDC38-203ENST00000546803 FBXO2Q9UK22 296 aaPredicted RBP18.75■□□□□ 0.59
CCDC38-203ENST00000546803 CFAP45Q9UL16 551 aa18.75■□□□□ 0.59
CCDC38-203ENST00000546803 KIAA1024Q9UPX6 916 aa18.75■□□□□ 0.59
CCDC38-203ENST00000546803 AKT3Q9Y243 479 aa18.75■□□□□ 0.59
CCDC38-203ENST00000546803 ZDHHC9Q9Y397 364 aa18.75■□□□□ 0.59
CCDC38-203ENST00000546803 PPP6R2O75170 966 aa18.74■□□□□ 0.59
CCDC38-203ENST00000546803 SHHQ15465 462 aa18.74■□□□□ 0.59
CCDC38-203ENST00000546803 ECM1Q16610 540 aa18.74■□□□□ 0.59
CCDC38-203ENST00000546803 CNKSR3Q6P9H4 555 aa18.74■□□□□ 0.59
CCDC38-203ENST00000546803 KRI1Q8N9T8 703 aaKnown RBP18.74■□□□□ 0.59
CCDC38-203ENST00000546803 TCP11Q8WWU5 503 aa18.74■□□□□ 0.59
CCDC38-203ENST00000546803 DDX19AQ9NUU7 478 aaKnown RBP18.74■□□□□ 0.59
CCDC38-203ENST00000546803 DNM3Q9UQ16 869 aa18.74■□□□□ 0.59
CCDC38-203ENST00000546803 LTBP2Q14767 1821 aa18.73■□□□□ 0.59
CCDC38-203ENST00000546803 SPTLC2O15270 562 aa18.73■□□□□ 0.59
CCDC38-203ENST00000546803 VTNP04004 478 aa18.73■□□□□ 0.59
CCDC38-203ENST00000546803 DDIT3P35638 169 aa18.73■□□□□ 0.59
CCDC38-203ENST00000546803 CRYBB1P53674 252 aaPredicted RBP18.73■□□□□ 0.59
CCDC38-203ENST00000546803 GRIN1Q05586 938 aa18.73■□□□□ 0.59
CCDC38-203ENST00000546803 TMEM62Q0P6H9 643 aa18.73■□□□□ 0.59
CCDC38-203ENST00000546803 MKRN4PQ13434 485 aaPredicted RBP18.73■□□□□ 0.59
CCDC38-203ENST00000546803 EMC2Q15006 297 aa18.73■□□□□ 0.59
CCDC38-203ENST00000546803 PLEKHG4Q58EX7 1191 aa18.73■□□□□ 0.59
CCDC38-203ENST00000546803 FBXO47Q5MNV8 452 aa18.73■□□□□ 0.59
CCDC38-203ENST00000546803 C9orf50Q5SZB4 431 aa18.73■□□□□ 0.59
CCDC38-203ENST00000546803 FAM43BQ6ZT52 329 aaPredicted RBP18.73■□□□□ 0.59
CCDC38-203ENST00000546803 CABP7Q86V35 215 aa18.73■□□□□ 0.59
CCDC38-203ENST00000546803 SEPT8Q92599 483 aa18.73■□□□□ 0.59
CCDC38-203ENST00000546803 CDK5RAP3Q96JB5 506 aa18.73■□□□□ 0.59
CCDC38-203ENST00000546803 RNPC3Q96LT9 517 aaKnown RBP18.73■□□□□ 0.59
CCDC38-203ENST00000546803 MTRQ99707 1265 aa18.73■□□□□ 0.59
CCDC38-203ENST00000546803 CCSER1Q9C0I3 900 aa18.73■□□□□ 0.59
CCDC38-203ENST00000546803 ATP6V0A4Q9HBG4 840 aa18.73■□□□□ 0.59
CCDC38-203ENST00000546803 SUCLA2Q9P2R7 463 aaPredicted RBP18.73■□□□□ 0.59
CCDC38-203ENST00000546803 TNRC18O15417 2968 aaPredicted RBP18.72■□□□□ 0.59
CCDC38-203ENST00000546803 A0A087WWV3 80 aa18.72■□□□□ 0.59
CCDC38-203ENST00000546803 ARHGEF35A5YM69 484 aa18.72■□□□□ 0.59
CCDC38-203ENST00000546803 EFCAB14O75071 495 aa18.72■□□□□ 0.59
CCDC38-203ENST00000546803 GPR32O75388 356 aa18.72■□□□□ 0.59
CCDC38-203ENST00000546803 BAIAP3O94812 1187 aa18.72■□□□□ 0.59
CCDC38-203ENST00000546803 EYA4O95677 639 aa18.72■□□□□ 0.59
CCDC38-203ENST00000546803 GHRP10912 638 aa18.72■□□□□ 0.59
CCDC38-203ENST00000546803 NLRP11P59045 1033 aaKnown RBP18.72■□□□□ 0.59
CCDC38-203ENST00000546803 DNM1Q05193 864 aaKnown RBP18.72■□□□□ 0.59
CCDC38-203ENST00000546803 DRP2Q13474 957 aa18.72■□□□□ 0.59
CCDC38-203ENST00000546803 LPIN1Q14693 890 aa18.72■□□□□ 0.59
CCDC38-203ENST00000546803 FOXD4L6Q3SYB3 417 aaPredicted RBP18.72■□□□□ 0.59
CCDC38-203ENST00000546803 RASIP1Q5U651 963 aa18.72■□□□□ 0.59
CCDC38-203ENST00000546803 FOXD4L3Q6VB84 417 aaPredicted RBP18.72■□□□□ 0.59
CCDC38-203ENST00000546803 TSHZ1Q6ZSZ6 1077 aa18.72■□□□□ 0.59
CCDC38-203ENST00000546803 OTOP2Q7RTS6 562 aa18.72■□□□□ 0.59
CCDC38-203ENST00000546803 DBF4BQ8NFT6 615 aa18.72■□□□□ 0.59
CCDC38-203ENST00000546803 KCNG4Q8TDN1 519 aa18.72■□□□□ 0.59
CCDC38-203ENST00000546803 PSPC1Q8WXF1 523 aaKnown RBP18.72■□□□□ 0.59
CCDC38-203ENST00000546803 APBB2Q92870 758 aa18.72■□□□□ 0.59
CCDC38-203ENST00000546803 CALML4Q96GE6 196 aa18.72■□□□□ 0.59
CCDC38-203ENST00000546803 CSRNP2Q9H175 543 aa18.72■□□□□ 0.59
CCDC38-203ENST00000546803 GINS2Q9Y248 185 aa18.72■□□□□ 0.59
CCDC38-203ENST00000546803 ABHD14A-ACY1A0A1B0GW23 586 aa18.71■□□□□ 0.59
CCDC38-203ENST00000546803 ASAP2O43150 1006 aa18.71■□□□□ 0.59
CCDC38-203ENST00000546803 GPC3P51654 580 aa18.71■□□□□ 0.59
CCDC38-203ENST00000546803 ZRSR1Q15695 479 aaKnown RBP18.71■□□□□ 0.59
CCDC38-203ENST00000546803 KIZQ2M2Z5 673 aa18.71■□□□□ 0.59
CCDC38-203ENST00000546803 ODR4Q5SWX8 454 aa18.71■□□□□ 0.59
CCDC38-203ENST00000546803 MCPH1Q8NEM0 835 aa18.71■□□□□ 0.59
CCDC38-203ENST00000546803 PNMA5Q96PV4 448 aa18.71■□□□□ 0.59
CCDC38-203ENST00000546803 IFIH1Q9BYX4 1025 aaKnown RBP18.71■□□□□ 0.59
CCDC38-203ENST00000546803 BHMT2Q9H2M3 363 aa18.71■□□□□ 0.59
CCDC38-203ENST00000546803 ADAMTS10Q9H324 1103 aa18.71■□□□□ 0.59
CCDC38-203ENST00000546803 XPNPEP1Q9NQW7 623 aa18.71■□□□□ 0.59
CCDC38-203ENST00000546803 USO1O60763 962 aaKnown RBP18.7■□□□□ 0.58
CCDC38-203ENST00000546803 CYP11B2P19099 503 aa18.7■□□□□ 0.58
CCDC38-203ENST00000546803 TXLNAP40222 546 aa18.7■□□□□ 0.58
CCDC38-203ENST00000546803 KRT85P78386 507 aa18.7■□□□□ 0.58
CCDC38-203ENST00000546803 GRB10Q13322 594 aa18.7■□□□□ 0.58
CCDC38-203ENST00000546803 IKBKEQ14164 716 aa18.7■□□□□ 0.58
CCDC38-203ENST00000546803 TMEM119Q4V9L6 283 aa18.7■□□□□ 0.58
CCDC38-203ENST00000546803 PADI6Q6TGC4 694 aa18.7■□□□□ 0.58
CCDC38-203ENST00000546803 ZNF410Q86VK4 478 aa18.7■□□□□ 0.58
CCDC38-203ENST00000546803 RHPN2Q8IUC4 686 aa18.7■□□□□ 0.58
CCDC38-203ENST00000546803 TMEM143Q96AN5 459 aa18.7■□□□□ 0.58
CCDC38-203ENST00000546803 CLIC6Q96NY7 704 aa18.7■□□□□ 0.58
CCDC38-203ENST00000546803 OSBPL7Q9BZF2 842 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms