RNA–Protein interactions for RNA: ENST00000546229.5

COPS7A-221, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-221ENST00000546229 FBXL18Q96ME1 805 aa14.27□□□□□ -0.13
COPS7A-221ENST00000546229 UIMC1Q96RL1 719 aa14.27□□□□□ -0.13
COPS7A-221ENST00000546229 KCNH6Q9H252 994 aa14.27□□□□□ -0.13
COPS7A-221ENST00000546229 ADAMTS10Q9H324 1103 aa14.27□□□□□ -0.13
COPS7A-221ENST00000546229 C1orf112Q9NSG2 853 aa14.27□□□□□ -0.13
COPS7A-221ENST00000546229 USP15Q9Y4E8 981 aaPredicted RBP14.27□□□□□ -0.13
COPS7A-221ENST00000546229 BACH1O14867 736 aa14.26□□□□□ -0.13
COPS7A-221ENST00000546229 FGF18O76093 207 aa14.26□□□□□ -0.13
COPS7A-221ENST00000546229 VTNP04004 478 aa14.26□□□□□ -0.13
COPS7A-221ENST00000546229 ATF7P17544 494 aaPredicted RBP14.26□□□□□ -0.13
COPS7A-221ENST00000546229 SETQ01105 290 aaPredicted RBP14.26□□□□□ -0.13
COPS7A-221ENST00000546229 APOBRQ0VD83 1088 aa14.26□□□□□ -0.13
COPS7A-221ENST00000546229 NFX1Q12986 1120 aaKnown RBP14.26□□□□□ -0.13
COPS7A-221ENST00000546229 UGCGQ16739 394 aa14.26□□□□□ -0.13
COPS7A-221ENST00000546229 MIS18BP1Q6P0N0 1132 aa14.26□□□□□ -0.13
COPS7A-221ENST00000546229 B3GNT9Q6UX72 402 aa14.26□□□□□ -0.13
COPS7A-221ENST00000546229 TMEM184AQ6ZMB5 413 aa14.26□□□□□ -0.13
COPS7A-221ENST00000546229 SYNE3Q6ZMZ3 975 aa14.26□□□□□ -0.13
COPS7A-221ENST00000546229 SMAP1Q8IYB5 467 aaPredicted RBP14.26□□□□□ -0.13
COPS7A-221ENST00000546229 RASGRP4Q8TDF6 673 aa14.26□□□□□ -0.13
COPS7A-221ENST00000546229 CASD1Q96PB1 797 aa14.26□□□□□ -0.13
COPS7A-221ENST00000546229 CEP89Q96ST8 783 aa14.26□□□□□ -0.13
COPS7A-221ENST00000546229 PPP1R16BQ96T49 567 aa14.26□□□□□ -0.13
COPS7A-221ENST00000546229 ELAC1Q9H777 363 aaKnown RBP14.26□□□□□ -0.13
COPS7A-221ENST00000546229 TMEM161AQ9NX61 479 aa14.26□□□□□ -0.13
COPS7A-221ENST00000546229 CFAP54Q96N23 3096 aa14.26□□□□□ -0.13
COPS7A-221ENST00000546229 DENND4AQ7Z401 1863 aa14.25□□□□□ -0.13
COPS7A-221ENST00000546229 TBKBP1A7MCY6 615 aa14.25□□□□□ -0.13
COPS7A-221ENST00000546229 METAP2P50579 478 aaKnown RBP eCLIP14.25□□□□□ -0.13
COPS7A-221ENST00000546229 CLCN3P51790 818 aa14.25□□□□□ -0.13
COPS7A-221ENST00000546229 BMP8AQ7Z5Y6 402 aa14.25□□□□□ -0.13
COPS7A-221ENST00000546229 RBM23Q86U06 439 aaKnown RBP14.25□□□□□ -0.13
COPS7A-221ENST00000546229 ZNF598Q86UK7 904 aaKnown RBP14.25□□□□□ -0.13
COPS7A-221ENST00000546229 REXO1Q8N1G1 1221 aaKnown RBP14.25□□□□□ -0.13
COPS7A-221ENST00000546229 EDAQ92838 391 aa14.25□□□□□ -0.13
COPS7A-221ENST00000546229 ZNF577Q9BSK1 485 aa14.25□□□□□ -0.13
COPS7A-221ENST00000546229 UPF3BQ9BZI7 483 aaKnown RBP14.25□□□□□ -0.13
COPS7A-221ENST00000546229 S1PR5Q9H228 398 aa14.25□□□□□ -0.13
COPS7A-221ENST00000546229 TLR9Q9NR96 1032 aa14.25□□□□□ -0.13
COPS7A-221ENST00000546229 TBC1D22BQ9NU19 505 aa14.25□□□□□ -0.13
COPS7A-221ENST00000546229 TYW1Q9NV66 732 aaKnown RBP14.25□□□□□ -0.13
COPS7A-221ENST00000546229 GINS2Q9Y248 185 aa14.25□□□□□ -0.13
COPS7A-221ENST00000546229 LZTS1Q9Y250 596 aa14.25□□□□□ -0.13
COPS7A-221ENST00000546229 PCDHB7Q9Y5E2 793 aa14.25□□□□□ -0.13
COPS7A-221ENST00000546229 VPS13AQ96RL7 3174 aa14.25□□□□□ -0.13
COPS7A-221ENST00000546229 CACNA1HO95180 2353 aa14.24□□□□□ -0.13
COPS7A-221ENST00000546229 GPR182O15218 404 aa14.24□□□□□ -0.13
COPS7A-221ENST00000546229 PRPF3O43395 683 aaKnown RBP14.24□□□□□ -0.13
COPS7A-221ENST00000546229 CDC45O75419 566 aa14.24□□□□□ -0.13
COPS7A-221ENST00000546229 STBD1O95210 358 aa14.24□□□□□ -0.13
COPS7A-221ENST00000546229 EVCP57679 992 aa14.24□□□□□ -0.13
COPS7A-221ENST00000546229 PLCB3Q01970 1234 aa14.24□□□□□ -0.13
COPS7A-221ENST00000546229 KRT32Q14532 448 aa14.24□□□□□ -0.13
COPS7A-221ENST00000546229 NPY5RQ15761 445 aa14.24□□□□□ -0.13
COPS7A-221ENST00000546229 CLLU1OSQ5K130 101 aa14.24□□□□□ -0.13
COPS7A-221ENST00000546229 ALYREFQ86V81 257 aaKnown RBP14.24□□□□□ -0.13
COPS7A-221ENST00000546229 PRSS33Q8NF86 280 aa14.24□□□□□ -0.13
COPS7A-221ENST00000546229 LRFN2Q9ULH4 789 aa14.24□□□□□ -0.13
COPS7A-221ENST00000546229 PCDHA10Q9Y5I2 948 aa14.24□□□□□ -0.13
COPS7A-221ENST00000546229 SNX14Q9Y5W7 946 aa14.24□□□□□ -0.13
COPS7A-221ENST00000546229 DENND3A2RUS2 1198 aa14.23□□□□□ -0.13
COPS7A-221ENST00000546229 PER2O15055 1255 aa14.23□□□□□ -0.13
COPS7A-221ENST00000546229 MSH4O15457 936 aa14.23□□□□□ -0.13
COPS7A-221ENST00000546229 HMGB1P09429 215 aaKnown RBP14.23□□□□□ -0.13
COPS7A-221ENST00000546229 HSPA4P34932 840 aa14.23□□□□□ -0.13
COPS7A-221ENST00000546229 ZNF76P36508 570 aa14.23□□□□□ -0.13
COPS7A-221ENST00000546229 GPC3P51654 580 aa14.23□□□□□ -0.13
COPS7A-221ENST00000546229 PRKCEQ02156 737 aa14.23□□□□□ -0.13
COPS7A-221ENST00000546229 TARBP2Q15633 366 aaKnown RBP14.23□□□□□ -0.13
COPS7A-221ENST00000546229 CSPP1Q1MSJ5 1256 aa14.23□□□□□ -0.13
COPS7A-221ENST00000546229 SYCE2Q6PIF2 218 aa14.23□□□□□ -0.13
COPS7A-221ENST00000546229 Q6ZUG5 572 aa14.23□□□□□ -0.13
COPS7A-221ENST00000546229 LRRC71Q8N4P6 559 aa14.23□□□□□ -0.13
COPS7A-221ENST00000546229 SLC5A5Q92911 643 aa14.23□□□□□ -0.13
COPS7A-221ENST00000546229 BRF1Q92994 677 aa14.23□□□□□ -0.13
COPS7A-221ENST00000546229 PHKBQ93100 1093 aa14.23□□□□□ -0.13
COPS7A-221ENST00000546229 PPP2R3CQ969Q6 453 aa14.23□□□□□ -0.13
COPS7A-221ENST00000546229 ASIC4Q96FT7 647 aa14.23□□□□□ -0.13
COPS7A-221ENST00000546229 CDCA3Q99618 268 aaPredicted RBP14.23□□□□□ -0.13
COPS7A-221ENST00000546229 PHF7Q9BWX1 381 aaPredicted RBP14.23□□□□□ -0.13
COPS7A-221ENST00000546229 TMEM117Q9H0C3 514 aa14.23□□□□□ -0.13
COPS7A-221ENST00000546229 GABBR1Q9UBS5 961 aa14.23□□□□□ -0.13
COPS7A-221ENST00000546229 HIDE1A8MVS5 230 aa14.22□□□□□ -0.13
COPS7A-221ENST00000546229 M0R2N6 131 aa14.22□□□□□ -0.13
COPS7A-221ENST00000546229 PPFIA3O75145 1194 aa14.22□□□□□ -0.13
COPS7A-221ENST00000546229 OATP04181 439 aa14.22□□□□□ -0.13
COPS7A-221ENST00000546229 PSAPP07602 524 aa14.22□□□□□ -0.13
COPS7A-221ENST00000546229 LAG3P18627 525 aa14.22□□□□□ -0.13
COPS7A-221ENST00000546229 PBX3P40426 434 aa14.22□□□□□ -0.13
COPS7A-221ENST00000546229 MRE11P49959 708 aa14.22□□□□□ -0.13
COPS7A-221ENST00000546229 NLRP11P59045 1033 aaKnown RBP14.22□□□□□ -0.13
COPS7A-221ENST00000546229 ZXDAP98168 799 aa14.22□□□□□ -0.13
COPS7A-221ENST00000546229 DRP2Q13474 957 aa14.22□□□□□ -0.13
COPS7A-221ENST00000546229 PRR16Q569H4 304 aa14.22□□□□□ -0.13
COPS7A-221ENST00000546229 MCTP2Q6DN12 878 aa14.22□□□□□ -0.13
COPS7A-221ENST00000546229 TRIM67Q6ZTA4 783 aa14.22□□□□□ -0.13
COPS7A-221ENST00000546229 CENPQQ7L2Z9 268 aaPredicted RBP14.22□□□□□ -0.13
COPS7A-221ENST00000546229 ECHDC2Q86YB7 292 aa14.22□□□□□ -0.13
COPS7A-221ENST00000546229 MRPS27Q92552 414 aaKnown RBP14.22□□□□□ -0.13
COPS7A-221ENST00000546229 RNF26Q9BY78 433 aaPredicted RBP14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms