RNA–Protein interactions for RNA: ENST00000546202.5

PPP1CA-211, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 4

Gene PPP1CA, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-211ENST00000546202 DDX12PQ92771 950 aa18.11■□□□□ 0.49
PPP1CA-211ENST00000546202 SYAP1Q96A49 352 aaPredicted RBP18.11■□□□□ 0.49
PPP1CA-211ENST00000546202 DNAJC19Q96DA6 116 aa18.11■□□□□ 0.49
PPP1CA-211ENST00000546202 DHX33Q9H6R0 707 aaKnown RBP18.11■□□□□ 0.49
PPP1CA-211ENST00000546202 BRCA2P51587 3418 aa18.11■□□□□ 0.49
PPP1CA-211ENST00000546202 GRIN2DO15399 1336 aa18.1■□□□□ 0.49
PPP1CA-211ENST00000546202 NRCAMQ92823 1304 aa18.1■□□□□ 0.49
PPP1CA-211ENST00000546202 RRN3P2A6NIE6 340 aa18.1■□□□□ 0.49
PPP1CA-211ENST00000546202 USO1O60763 962 aaKnown RBP18.1■□□□□ 0.49
PPP1CA-211ENST00000546202 MAFO75444 373 aaPredicted RBP18.1■□□□□ 0.49
PPP1CA-211ENST00000546202 CASP1P29466 404 aa18.1■□□□□ 0.49
PPP1CA-211ENST00000546202 PNOCQ13519 176 aa18.1■□□□□ 0.49
PPP1CA-211ENST00000546202 CUL4BQ13620 913 aa18.1■□□□□ 0.49
PPP1CA-211ENST00000546202 GRIK4Q16099 956 aa18.1■□□□□ 0.49
PPP1CA-211ENST00000546202 NBPF20Q3BBV1 942 aa18.1■□□□□ 0.49
PPP1CA-211ENST00000546202 RBM43Q6ZSC3 357 aaKnown RBP18.1■□□□□ 0.49
PPP1CA-211ENST00000546202 SESTD1Q86VW0 696 aa18.1■□□□□ 0.49
PPP1CA-211ENST00000546202 EXOC8Q8IYI6 725 aa18.1■□□□□ 0.49
PPP1CA-211ENST00000546202 SPATA20Q8TB22 786 aa18.1■□□□□ 0.49
PPP1CA-211ENST00000546202 TIPINQ9BVW5 301 aa18.1■□□□□ 0.49
PPP1CA-211ENST00000546202 BMP2KQ9NSY1 1161 aaPredicted RBP18.1■□□□□ 0.49
PPP1CA-211ENST00000546202 TRIOBPQ9H2D6 2365 aa18.1■□□□□ 0.49
PPP1CA-211ENST00000546202 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.09■□□□□ 0.49
PPP1CA-211ENST00000546202 IGKV6-21A0A0C4DH24 114 aa18.09■□□□□ 0.49
PPP1CA-211ENST00000546202 A0A1W2PQ45 241 aaPredicted RBP18.09■□□□□ 0.49
PPP1CA-211ENST00000546202 A0A1W2PQY0 241 aa18.09■□□□□ 0.49
PPP1CA-211ENST00000546202 C22orf31O95567 290 aa18.09■□□□□ 0.49
PPP1CA-211ENST00000546202 TFRCP02786 760 aaKnown RBP18.09■□□□□ 0.49
PPP1CA-211ENST00000546202 MNX1P50219 401 aaPredicted RBP18.09■□□□□ 0.49
PPP1CA-211ENST00000546202 POLGP54098 1239 aaPredicted RBP18.09■□□□□ 0.49
PPP1CA-211ENST00000546202 ADAM17P78536 824 aa18.09■□□□□ 0.49
PPP1CA-211ENST00000546202 TBC1D8BQ0IIM8 1120 aa18.09■□□□□ 0.49
PPP1CA-211ENST00000546202 GIT2Q14161 759 aa18.09■□□□□ 0.49
PPP1CA-211ENST00000546202 MARCH8Q5T0T0 291 aa18.09■□□□□ 0.49
PPP1CA-211ENST00000546202 NFRKBQ6P4R8 1299 aa18.09■□□□□ 0.49
PPP1CA-211ENST00000546202 C7orf31Q8N865 590 aa18.09■□□□□ 0.49
PPP1CA-211ENST00000546202 ANKLE1Q8NAG6 615 aa18.09■□□□□ 0.49
PPP1CA-211ENST00000546202 LMBR1Q8WVP7 490 aa18.09■□□□□ 0.49
PPP1CA-211ENST00000546202 TRAPPC12Q8WVT3 735 aa18.09■□□□□ 0.49
PPP1CA-211ENST00000546202 GLT1D1Q96MS3 346 aa18.09■□□□□ 0.49
PPP1CA-211ENST00000546202 REEP2Q9BRK0 252 aa18.09■□□□□ 0.49
PPP1CA-211ENST00000546202 BLZF1Q9H2G9 400 aa18.09■□□□□ 0.49
PPP1CA-211ENST00000546202 ATP6V0A4Q9HBG4 840 aa18.09■□□□□ 0.49
PPP1CA-211ENST00000546202 XPNPEP1Q9NQW7 623 aa18.09■□□□□ 0.49
PPP1CA-211ENST00000546202 SETD4Q9NVD3 440 aa18.09■□□□□ 0.49
PPP1CA-211ENST00000546202 HDAC6Q9UBN7 1215 aa18.09■□□□□ 0.49
PPP1CA-211ENST00000546202 ODF2LQ9ULJ1 636 aa18.09■□□□□ 0.49
PPP1CA-211ENST00000546202 NPHP3-ACAD11A0A0J9YXS1 232 aa18.08■□□□□ 0.48
PPP1CA-211ENST00000546202 MBLAC1A4D2B0 266 aaPredicted RBP18.08■□□□□ 0.48
PPP1CA-211ENST00000546202 MAGEB2O15479 319 aa18.08■□□□□ 0.48
PPP1CA-211ENST00000546202 GAS2O43903 313 aaKnown RBP18.08■□□□□ 0.48
PPP1CA-211ENST00000546202 SARSP49591 514 aaKnown RBP18.08■□□□□ 0.48
PPP1CA-211ENST00000546202 CHMP4BP1P59074 171 aa18.08■□□□□ 0.48
PPP1CA-211ENST00000546202 MAPK7Q13164 816 aa18.08■□□□□ 0.48
PPP1CA-211ENST00000546202 HIC1Q14526 733 aa18.08■□□□□ 0.48
PPP1CA-211ENST00000546202 EMC2Q15006 297 aa18.08■□□□□ 0.48
PPP1CA-211ENST00000546202 NT5DC1Q5TFE4 455 aa18.08■□□□□ 0.48
PPP1CA-211ENST00000546202 CHRDL2Q6WN34 429 aa18.08■□□□□ 0.48
PPP1CA-211ENST00000546202 DYMQ7RTS9 669 aa18.08■□□□□ 0.48
PPP1CA-211ENST00000546202 SLC43A3Q8NBI5 491 aa18.08■□□□□ 0.48
PPP1CA-211ENST00000546202 MCPH1Q8NEM0 835 aa18.08■□□□□ 0.48
PPP1CA-211ENST00000546202 SLC7A3Q8WY07 619 aa18.08■□□□□ 0.48
PPP1CA-211ENST00000546202 JPH2Q9BR39 696 aaPredicted RBP18.08■□□□□ 0.48
PPP1CA-211ENST00000546202 GTF2IRD1Q9UHL9 959 aa18.08■□□□□ 0.48
PPP1CA-211ENST00000546202 PCDHA5Q9Y5H7 936 aa18.08■□□□□ 0.48
PPP1CA-211ENST00000546202 CEP290O15078 2479 aa18.08■□□□□ 0.48
PPP1CA-211ENST00000546202 PVALEFA0A1B0GWK0 134 aa18.07■□□□□ 0.48
PPP1CA-211ENST00000546202 FRMD3A2A2Y4 597 aa18.07■□□□□ 0.48
PPP1CA-211ENST00000546202 KLRC4O43908 158 aa18.07■□□□□ 0.48
PPP1CA-211ENST00000546202 SMC2O95347 1197 aa18.07■□□□□ 0.48
PPP1CA-211ENST00000546202 KRT18P05783 430 aaKnown RBP18.07■□□□□ 0.48
PPP1CA-211ENST00000546202 KLRC1P26715 233 aa18.07■□□□□ 0.48
PPP1CA-211ENST00000546202 IGBP1P78318 339 aa18.07■□□□□ 0.48
PPP1CA-211ENST00000546202 ASIC1P78348 528 aa18.07■□□□□ 0.48
PPP1CA-211ENST00000546202 PTPN11Q06124 597 aaPredicted RBP18.07■□□□□ 0.48
PPP1CA-211ENST00000546202 RAD51AP2Q09MP3 1159 aa18.07■□□□□ 0.48
PPP1CA-211ENST00000546202 ITGA7Q13683 1181 aa18.07■□□□□ 0.48
PPP1CA-211ENST00000546202 MTHFD1LQ6UB35 978 aa18.07■□□□□ 0.48
PPP1CA-211ENST00000546202 DAW1Q8N136 415 aa18.07■□□□□ 0.48
PPP1CA-211ENST00000546202 LINC01465Q8N7H1 131 aa18.07■□□□□ 0.48
PPP1CA-211ENST00000546202 PPP1R13LQ8WUF5 828 aa18.07■□□□□ 0.48
PPP1CA-211ENST00000546202 ERCC4Q92889 916 aaPredicted RBP18.07■□□□□ 0.48
PPP1CA-211ENST00000546202 SEZ6LQ9BYH1 1024 aa18.07■□□□□ 0.48
PPP1CA-211ENST00000546202 KIAA1468Q9P260 1216 aa18.07■□□□□ 0.48
PPP1CA-211ENST00000546202 TUBE1Q9UJT0 475 aa18.07■□□□□ 0.48
PPP1CA-211ENST00000546202 C17orf102A2RUQ5 167 aa18.06■□□□□ 0.48
PPP1CA-211ENST00000546202 HIP1RO75146 1068 aa18.06■□□□□ 0.48
PPP1CA-211ENST00000546202 RPN1P04843 607 aaKnown RBP18.06■□□□□ 0.48
PPP1CA-211ENST00000546202 GNAT1P11488 350 aa18.06■□□□□ 0.48
PPP1CA-211ENST00000546202 ZNF131P52739 623 aa18.06■□□□□ 0.48
PPP1CA-211ENST00000546202 EHHADHQ08426 723 aa18.06■□□□□ 0.48
PPP1CA-211ENST00000546202 UNC13DQ70J99 1090 aa18.06■□□□□ 0.48
PPP1CA-211ENST00000546202 SMARCE1Q969G3 411 aa18.06■□□□□ 0.48
PPP1CA-211ENST00000546202 DRC1Q96MC2 740 aa18.06■□□□□ 0.48
PPP1CA-211ENST00000546202 GSDMAQ96QA5 445 aa18.06■□□□□ 0.48
PPP1CA-211ENST00000546202 STARD7Q9NQZ5 370 aa18.06■□□□□ 0.48
PPP1CA-211ENST00000546202 A0A0U1RQG5 324 aaPredicted RBP18.05■□□□□ 0.48
PPP1CA-211ENST00000546202 RSPH10B2B2RC85 870 aa18.05■□□□□ 0.48
PPP1CA-211ENST00000546202 TBCAO75347 108 aaKnown RBP18.05■□□□□ 0.48
PPP1CA-211ENST00000546202 LETM1O95202 739 aaPredicted RBP18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms