RNA–Protein interactions for RNA: ENST00000545831.5

NPIPA1-208, Transcript of nuclear pore complex interacting protein family member A1, human

TSL 3

Gene NPIPA1, Length 553 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NPIPA1-208	ENST00000545831	FAM26F	Q5R3K3	315 aa		11.12	□□□□□ -0.63
NPIPA1-208	ENST00000545831	C11orf57	Q6ZUT1	292 aa	Predicted RBP	11.12	□□□□□ -0.63
NPIPA1-208	ENST00000545831	MAEA	Q7L5Y9	396 aa		11.12	□□□□□ -0.63
NPIPA1-208	ENST00000545831	FAM200A	Q8TCP9	573 aa		11.12	□□□□□ -0.63
NPIPA1-208	ENST00000545831	KIFAP3	Q92845	792 aa		11.12	□□□□□ -0.63
NPIPA1-208	ENST00000545831	LENG1	Q96BZ8	264 aa	Predicted RBP	11.12	□□□□□ -0.63
NPIPA1-208	ENST00000545831	C16orf70	Q9BSU1	422 aa		11.12	□□□□□ -0.63
NPIPA1-208	ENST00000545831	KATNAL1	Q9BW62	490 aa		11.12	□□□□□ -0.63
NPIPA1-208	ENST00000545831	SLC39A2	Q9NP94	309 aa		11.12	□□□□□ -0.63
NPIPA1-208	ENST00000545831	XPNPEP3	Q9NQH7	507 aa		11.12	□□□□□ -0.63
NPIPA1-208	ENST00000545831	DDX20	Q9UHI6	824 aa	Known RBP	11.12	□□□□□ -0.63
NPIPA1-208	ENST00000545831	GDA	Q9Y2T3	454 aa		11.12	□□□□□ -0.63
NPIPA1-208	ENST00000545831	RRN3P2	A6NIE6	340 aa		11.11	□□□□□ -0.63
NPIPA1-208	ENST00000545831	BECN2	A8MW95	431 aa		11.11	□□□□□ -0.63
NPIPA1-208	ENST00000545831	RSPH10B2	B2RC85	870 aa		11.11	□□□□□ -0.63
NPIPA1-208	ENST00000545831	GOLGA6L19	H0YKK7	550 aa		11.11	□□□□□ -0.63
NPIPA1-208	ENST00000545831	MAGEB2	O15479	319 aa		11.11	□□□□□ -0.63
NPIPA1-208	ENST00000545831	RSPH10B	P0C881	870 aa		11.11	□□□□□ -0.63
NPIPA1-208	ENST00000545831	BMP6	P22004	513 aa		11.11	□□□□□ -0.63
NPIPA1-208	ENST00000545831	ERCC5	P28715	1186 aa	Predicted RBP	11.11	□□□□□ -0.63
NPIPA1-208	ENST00000545831	ZNF131	P52739	623 aa		11.11	□□□□□ -0.63
NPIPA1-208	ENST00000545831	TPM4	P67936	248 aa		11.11	□□□□□ -0.63
NPIPA1-208	ENST00000545831	NKX3-2	P78367	333 aa		11.11	□□□□□ -0.63
NPIPA1-208	ENST00000545831	BEX3	Q00994	111 aa		11.11	□□□□□ -0.63
NPIPA1-208	ENST00000545831	EHHADH	Q08426	723 aa		11.11	□□□□□ -0.63
NPIPA1-208	ENST00000545831	COBLL1	Q53SF7	1204 aa		11.11	□□□□□ -0.63
NPIPA1-208	ENST00000545831	ODR4	Q5SWX8	454 aa		11.11	□□□□□ -0.63
NPIPA1-208	ENST00000545831	L1TD1	Q5T7N2	865 aa	Known RBP	11.11	□□□□□ -0.63
NPIPA1-208	ENST00000545831	FAM102B	Q5T8I3	360 aa		11.11	□□□□□ -0.63
NPIPA1-208	ENST00000545831	STXBP4	Q6ZWJ1	553 aa		11.11	□□□□□ -0.63
NPIPA1-208	ENST00000545831	SFR1	Q86XK3	245 aa		11.11	□□□□□ -0.63
NPIPA1-208	ENST00000545831	SLC17A8	Q8NDX2	589 aa		11.11	□□□□□ -0.63
NPIPA1-208	ENST00000545831	TCP11	Q8WWU5	503 aa		11.11	□□□□□ -0.63
NPIPA1-208	ENST00000545831	IFT74	Q96LB3	600 aa		11.11	□□□□□ -0.63
NPIPA1-208	ENST00000545831	BPIFA3	Q9BQP9	254 aa		11.11	□□□□□ -0.63
NPIPA1-208	ENST00000545831	RBSN	Q9H1K0	784 aa		11.11	□□□□□ -0.63
NPIPA1-208	ENST00000545831	RNPEP	Q9H4A4	650 aa		11.11	□□□□□ -0.63
NPIPA1-208	ENST00000545831	DHX33	Q9H6R0	707 aa	Known RBP	11.11	□□□□□ -0.63
NPIPA1-208	ENST00000545831	C17orf75	Q9HAS0	396 aa		11.11	□□□□□ -0.63
NPIPA1-208	ENST00000545831	COL1A2	P08123	1366 aa		11.11	□□□□□ -0.63
NPIPA1-208	ENST00000545831	SYNRG	Q9UMZ2	1314 aa		11.1	□□□□□ -0.63
NPIPA1-208	ENST00000545831	MYH9	P35579	1960 aa	Known RBP	11.1	□□□□□ -0.63
NPIPA1-208	ENST00000545831	SFI1	A8K8P3	1242 aa		11.1	□□□□□ -0.63
NPIPA1-208	ENST00000545831	PSMA7	O14818	248 aa		11.1	□□□□□ -0.63
NPIPA1-208	ENST00000545831	PGK1	P00558	417 aa		11.1	□□□□□ -0.63
NPIPA1-208	ENST00000545831	F2	P00734	622 aa		11.1	□□□□□ -0.63
NPIPA1-208	ENST00000545831	MYCN	P04198	464 aa	Predicted RBP	11.1	□□□□□ -0.63
NPIPA1-208	ENST00000545831	MAPT	P10636	758 aa	Known RBP	11.1	□□□□□ -0.63
NPIPA1-208	ENST00000545831	HSPA8	P11142	646 aa	Known RBP	11.1	□□□□□ -0.63
NPIPA1-208	ENST00000545831	PLS3	P13797	630 aa		11.1	□□□□□ -0.63
NPIPA1-208	ENST00000545831	INSRR	P14616	1297 aa		11.1	□□□□□ -0.63
NPIPA1-208	ENST00000545831	PRCP	P42785	496 aa		11.1	□□□□□ -0.63
NPIPA1-208	ENST00000545831	CTCF	P49711	727 aa	Predicted RBP	11.1	□□□□□ -0.63
NPIPA1-208	ENST00000545831	PSEN2	P49810	448 aa		11.1	□□□□□ -0.63
NPIPA1-208	ENST00000545831	DNM2	P50570	870 aa		11.1	□□□□□ -0.63
NPIPA1-208	ENST00000545831	SMTN	P53814	917 aa		11.1	□□□□□ -0.63
NPIPA1-208	ENST00000545831	CHMP4BP1	P59074	171 aa		11.1	□□□□□ -0.63
NPIPA1-208	ENST00000545831	STK4	Q13043	487 aa		11.1	□□□□□ -0.63
NPIPA1-208	ENST00000545831	MAPK7	Q13164	816 aa		11.1	□□□□□ -0.63
NPIPA1-208	ENST00000545831	MFSD10	Q14728	455 aa		11.1	□□□□□ -0.63
NPIPA1-208	ENST00000545831	EMC2	Q15006	297 aa		11.1	□□□□□ -0.63
NPIPA1-208	ENST00000545831	PPP2R5A	Q15172	486 aa		11.1	□□□□□ -0.63
NPIPA1-208	ENST00000545831	IER5	Q5VY09	327 aa		11.1	□□□□□ -0.63
NPIPA1-208	ENST00000545831	KLHL10	Q6JEL2	608 aa		11.1	□□□□□ -0.63
NPIPA1-208	ENST00000545831	CTU1	Q7Z7A3	348 aa	Known RBP	11.1	□□□□□ -0.63
NPIPA1-208	ENST00000545831	RNF180	Q86T96	592 aa		11.1	□□□□□ -0.63
NPIPA1-208	ENST00000545831	FAM178B	Q8IXR5	827 aa		11.1	□□□□□ -0.63
NPIPA1-208	ENST00000545831	MYOCD	Q8IZQ8	938 aa		11.1	□□□□□ -0.63
NPIPA1-208	ENST00000545831	ADSSL1	Q8N142	457 aa		11.1	□□□□□ -0.63
NPIPA1-208	ENST00000545831	GUF1	Q8N442	669 aa	Known RBP	11.1	□□□□□ -0.63
NPIPA1-208	ENST00000545831	PCSK9	Q8NBP7	692 aa	Known RBP	11.1	□□□□□ -0.63
NPIPA1-208	ENST00000545831	RETREG2	Q8NC44	543 aa		11.1	□□□□□ -0.63
NPIPA1-208	ENST00000545831	RNF214	Q8ND24	703 aa		11.1	□□□□□ -0.63
NPIPA1-208	ENST00000545831	DHTKD1	Q96HY7	919 aa	Predicted RBP	11.1	□□□□□ -0.63
NPIPA1-208	ENST00000545831	MTG1	Q9BT17	334 aa	Predicted RBP	11.1	□□□□□ -0.63
NPIPA1-208	ENST00000545831	MRPL44	Q9H9J2	332 aa	Known RBP	11.1	□□□□□ -0.63
NPIPA1-208	ENST00000545831	CBX8	Q9HC52	389 aa		11.1	□□□□□ -0.63
NPIPA1-208	ENST00000545831	POLD4	Q9HCU8	107 aa		11.1	□□□□□ -0.63
NPIPA1-208	ENST00000545831	PDLIM7	Q9NR12	457 aa		11.1	□□□□□ -0.63
NPIPA1-208	ENST00000545831	OLFML3	Q9NRN5	406 aa		11.1	□□□□□ -0.63
NPIPA1-208	ENST00000545831	TBC1D7	Q9P0N9	293 aa		11.1	□□□□□ -0.63
NPIPA1-208	ENST00000545831	BICDL2	A1A5D9	508 aa		11.09	□□□□□ -0.63
NPIPA1-208	ENST00000545831	PPP1R3G	B7ZBB8	358 aa		11.09	□□□□□ -0.63
NPIPA1-208	ENST00000545831		H0YCG3	227 aa		11.09	□□□□□ -0.63
NPIPA1-208	ENST00000545831	ADAMTS4	O75173	837 aa		11.09	□□□□□ -0.63
NPIPA1-208	ENST00000545831	MAF	O75444	373 aa	Predicted RBP	11.09	□□□□□ -0.63
NPIPA1-208	ENST00000545831	GCNT3	O95395	438 aa		11.09	□□□□□ -0.63
NPIPA1-208	ENST00000545831	HSPA1A	P0DMV8	641 aa	Known RBP	11.09	□□□□□ -0.63
NPIPA1-208	ENST00000545831	HSPA1B	P0DMV9	641 aa	Known RBP	11.09	□□□□□ -0.63
NPIPA1-208	ENST00000545831	KLRC1	P26715	233 aa		11.09	□□□□□ -0.63
NPIPA1-208	ENST00000545831	TMOD1	P28289	359 aa		11.09	□□□□□ -0.63
NPIPA1-208	ENST00000545831	CST5	P28325	142 aa	Predicted RBP	11.09	□□□□□ -0.63
NPIPA1-208	ENST00000545831	ABCD1	P33897	745 aa		11.09	□□□□□ -0.63
NPIPA1-208	ENST00000545831	RTP1	P59025	263 aa		11.09	□□□□□ -0.63
NPIPA1-208	ENST00000545831	IGBP1	P78318	339 aa		11.09	□□□□□ -0.63
NPIPA1-208	ENST00000545831	PURA	Q00577	322 aa	Known RBP	11.09	□□□□□ -0.63
NPIPA1-208	ENST00000545831	PPFIA1	Q13136	1202 aa		11.09	□□□□□ -0.63
NPIPA1-208	ENST00000545831	PAK1	Q13153	545 aa		11.09	□□□□□ -0.63
NPIPA1-208	ENST00000545831	DMP1	Q13316	513 aa	Predicted RBP	11.09	□□□□□ -0.63
NPIPA1-208	ENST00000545831	ALCAM	Q13740	583 aa		11.09	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms