RNA–Protein interactions for RNA: ENST00000545707.5

LDLR-204, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-204ENST00000545707 TBX3O15119 743 aa17.21■□□□□ 0.35
LDLR-204ENST00000545707 FAM13AO94988 1023 aa17.21■□□□□ 0.35
LDLR-204ENST00000545707 GH2P01242 217 aa17.21■□□□□ 0.35
LDLR-204ENST00000545707 CYP2J2P51589 502 aa17.21■□□□□ 0.35
LDLR-204ENST00000545707 RRP1BQ14684 758 aaKnown RBP17.21■□□□□ 0.35
LDLR-204ENST00000545707 IFI16Q16666 785 aaKnown RBP17.21■□□□□ 0.35
LDLR-204ENST00000545707 NT5DC3Q86UY8 548 aa17.21■□□□□ 0.35
LDLR-204ENST00000545707 CD302Q8IX05 232 aa17.21■□□□□ 0.35
LDLR-204ENST00000545707 OLIG1Q8TAK6 271 aa17.21■□□□□ 0.35
LDLR-204ENST00000545707 BORCS6Q96GS4 357 aa17.21■□□□□ 0.35
LDLR-204ENST00000545707 FAM20AQ96MK3 541 aa17.21■□□□□ 0.35
LDLR-204ENST00000545707 WDR18Q9BV38 432 aa17.21■□□□□ 0.35
LDLR-204ENST00000545707 METTL14Q9HCE5 456 aaKnown RBP17.21■□□□□ 0.35
LDLR-204ENST00000545707 STXBP5LQ9Y2K9 1186 aa17.21■□□□□ 0.35
LDLR-204ENST00000545707 ZMYM2Q9UBW7 1377 aa17.21■□□□□ 0.35
LDLR-204ENST00000545707 A0A1W2PRG0 241 aa17.21■□□□□ 0.35
LDLR-204ENST00000545707 SLITRK3O94933 977 aa17.21■□□□□ 0.35
LDLR-204ENST00000545707 EYA4O95677 639 aa17.21■□□□□ 0.35
LDLR-204ENST00000545707 ITGB3BPQ13352 177 aaPredicted RBP17.21■□□□□ 0.35
LDLR-204ENST00000545707 PRPF4BQ13523 1007 aaKnown RBP17.21■□□□□ 0.35
LDLR-204ENST00000545707 PLS1Q14651 629 aa17.21■□□□□ 0.35
LDLR-204ENST00000545707 BMT2Q1RMZ1 405 aa17.21■□□□□ 0.35
LDLR-204ENST00000545707 ABCB5Q2M3G0 1257 aa17.21■□□□□ 0.35
LDLR-204ENST00000545707 CBWD6Q4V339 395 aa17.21■□□□□ 0.35
LDLR-204ENST00000545707 CBWD3Q5JTY5 395 aa17.21■□□□□ 0.35
LDLR-204ENST00000545707 CBWD5Q5RIA9 395 aa17.21■□□□□ 0.35
LDLR-204ENST00000545707 UBLCP1Q8WVY7 318 aaPredicted RBP17.21■□□□□ 0.35
LDLR-204ENST00000545707 GJD4Q96KN9 370 aaPredicted RBP17.21■□□□□ 0.35
LDLR-204ENST00000545707 FBXL5Q9UKA1 691 aa17.21■□□□□ 0.35
LDLR-204ENST00000545707 PPP1R9AQ9ULJ8 1098 aa17.21■□□□□ 0.35
LDLR-204ENST00000545707 LY75O60449 1722 aa17.21■□□□□ 0.35
LDLR-204ENST00000545707 H0YGN5 161 aa17.2■□□□□ 0.34
LDLR-204ENST00000545707 TULP1O00294 542 aaPredicted RBP17.2■□□□□ 0.34
LDLR-204ENST00000545707 BUB1BO60566 1050 aaPredicted RBP17.2■□□□□ 0.34
LDLR-204ENST00000545707 ERLIN2O94905 339 aa17.2■□□□□ 0.34
LDLR-204ENST00000545707 CFBP00751 764 aa17.2■□□□□ 0.34
LDLR-204ENST00000545707 CTNNA1P35221 906 aaKnown RBP17.2■□□□□ 0.34
LDLR-204ENST00000545707 DRAP1Q14919 205 aaPredicted RBP17.2■□□□□ 0.34
LDLR-204ENST00000545707 ARHGAP44Q17R89 818 aa17.2■□□□□ 0.34
LDLR-204ENST00000545707 VPS36Q86VN1 386 aa17.2■□□□□ 0.34
LDLR-204ENST00000545707 PALB2Q86YC2 1186 aa17.2■□□□□ 0.34
LDLR-204ENST00000545707 SLC35G2Q8TBE7 412 aa17.2■□□□□ 0.34
LDLR-204ENST00000545707 ZDHHC15Q96MV8 337 aa17.2■□□□□ 0.34
LDLR-204ENST00000545707 TMBIM4Q9HC24 238 aa17.2■□□□□ 0.34
LDLR-204ENST00000545707 PPANQ9NQ55 473 aaKnown RBP17.2■□□□□ 0.34
LDLR-204ENST00000545707 SEPT11Q9NVA2 429 aaKnown RBP17.2■□□□□ 0.34
LDLR-204ENST00000545707 TAS2R14Q9NYV8 317 aa17.2■□□□□ 0.34
LDLR-204ENST00000545707 DNAJC12Q9UKB3 198 aa17.2■□□□□ 0.34
LDLR-204ENST00000545707 NFS1Q9Y697 457 aa17.2■□□□□ 0.34
LDLR-204ENST00000545707 LTBP4Q8N2S1 1624 aa17.2■□□□□ 0.34
LDLR-204ENST00000545707 CES2O00748 559 aa17.2■□□□□ 0.34
LDLR-204ENST00000545707 PPP1R37O75864 691 aa17.2■□□□□ 0.34
LDLR-204ENST00000545707 FGGP02679 453 aa17.2■□□□□ 0.34
LDLR-204ENST00000545707 MDH1P40925 334 aaKnown RBP17.2■□□□□ 0.34
LDLR-204ENST00000545707 FBXW10Q5XX13 1052 aa17.2■□□□□ 0.34
LDLR-204ENST00000545707 SLFN11Q7Z7L1 901 aa17.2■□□□□ 0.34
LDLR-204ENST00000545707 SEPT12Q8IYM1 358 aa17.2■□□□□ 0.34
LDLR-204ENST00000545707 HSD17B14Q9BPX1 270 aa17.2■□□□□ 0.34
LDLR-204ENST00000545707 TRIM51Q9BSJ1 452 aa17.2■□□□□ 0.34
LDLR-204ENST00000545707 EPN3Q9H201 632 aa17.2■□□□□ 0.34
LDLR-204ENST00000545707 WRAP73Q9P2S5 460 aaPredicted RBP17.2■□□□□ 0.34
LDLR-204ENST00000545707 BACH1O14867 736 aa17.19■□□□□ 0.34
LDLR-204ENST00000545707 SLC16A3O15427 465 aaKnown RBP17.19■□□□□ 0.34
LDLR-204ENST00000545707 LRRN2O75325 713 aa17.19■□□□□ 0.34
LDLR-204ENST00000545707 BMP3P12645 472 aa17.19■□□□□ 0.34
LDLR-204ENST00000545707 INPP5BP32019 993 aa17.19■□□□□ 0.34
LDLR-204ENST00000545707 STAT1P42224 750 aa17.19■□□□□ 0.34
LDLR-204ENST00000545707 PTGISQ16647 500 aa17.19■□□□□ 0.34
LDLR-204ENST00000545707 TATDN1Q6P1N9 297 aa17.19■□□□□ 0.34
LDLR-204ENST00000545707 ARHGEF26Q96DR7 871 aa17.19■□□□□ 0.34
LDLR-204ENST00000545707 TDRD3Q9H7E2 651 aaKnown RBP17.19■□□□□ 0.34
LDLR-204ENST00000545707 SMCHD1A6NHR9 2005 aa17.19■□□□□ 0.34
LDLR-204ENST00000545707 IGLV3-22A0A075B6J6 115 aa17.19■□□□□ 0.34
LDLR-204ENST00000545707 F8VZ95 297 aa17.19■□□□□ 0.34
LDLR-204ENST00000545707 GCOM1H8Y6P7 765 aaPredicted RBP17.19■□□□□ 0.34
LDLR-204ENST00000545707 SLC26A4O43511 780 aa17.19■□□□□ 0.34
LDLR-204ENST00000545707 FOSP01100 380 aaPredicted RBP17.19■□□□□ 0.34
LDLR-204ENST00000545707 MYZAPP0CAP1 466 aa17.19■□□□□ 0.34
LDLR-204ENST00000545707 TMOD1P28289 359 aa17.19■□□□□ 0.34
LDLR-204ENST00000545707 CIITAP33076 1130 aa17.19■□□□□ 0.34
LDLR-204ENST00000545707 PSMC2P35998 433 aaKnown RBP17.19■□□□□ 0.34
LDLR-204ENST00000545707 ECE1P42892 770 aa17.19■□□□□ 0.34
LDLR-204ENST00000545707 HDLBPQ00341 1268 aaKnown RBP17.19■□□□□ 0.34
LDLR-204ENST00000545707 ZNF844Q08AG5 666 aa17.19■□□□□ 0.34
LDLR-204ENST00000545707 ZNF211Q13398 564 aaPredicted RBP17.19■□□□□ 0.34
LDLR-204ENST00000545707 TMEM179Q6ZVK1 233 aa17.19■□□□□ 0.34
LDLR-204ENST00000545707 MAEAQ7L5Y9 396 aa17.19■□□□□ 0.34
LDLR-204ENST00000545707 OTOP1Q7RTM1 612 aa17.19■□□□□ 0.34
LDLR-204ENST00000545707 BANK1Q8NDB2 785 aa17.19■□□□□ 0.34
LDLR-204ENST00000545707 POLR3CQ9BUI4 534 aaPredicted RBP17.19■□□□□ 0.34
LDLR-204ENST00000545707 SUCLA2Q9P2R7 463 aaPredicted RBP17.19■□□□□ 0.34
LDLR-204ENST00000545707 PRR12Q9ULL5 1215 aa17.19■□□□□ 0.34
LDLR-204ENST00000545707 LTBP1Q14766 1721 aa17.18■□□□□ 0.34
LDLR-204ENST00000545707 GOLGA6L10A6NI86 522 aa17.18■□□□□ 0.34
LDLR-204ENST00000545707 DCDC2CA8MYV0 355 aa17.18■□□□□ 0.34
LDLR-204ENST00000545707 HMGB1P1B2RPK0 211 aaPredicted RBP17.18■□□□□ 0.34
LDLR-204ENST00000545707 E7EVH7 732 aa17.18■□□□□ 0.34
LDLR-204ENST00000545707 MYO1FO00160 1098 aa17.18■□□□□ 0.34
LDLR-204ENST00000545707 FERP16591 822 aa17.18■□□□□ 0.34
LDLR-204ENST00000545707 SOX5P35711 763 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms