RNA–Protein interactions for RNA: ENST00000545432.5

RTN3-214, Transcript of reticulon 3, humanhuman

TSL 4

Gene RTN3, Length 545 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-214ENST00000545432 IGHDP01880 384 aa16.82■□□□□ 0.28
RTN3-214ENST00000545432 ARP10275 920 aa16.82■□□□□ 0.28
RTN3-214ENST00000545432 MTHFRP42898 656 aa16.82■□□□□ 0.28
RTN3-214ENST00000545432 KRT17Q04695 432 aa16.82■□□□□ 0.28
RTN3-214ENST00000545432 UBE2SQ16763 222 aa16.82■□□□□ 0.28
RTN3-214ENST00000545432 ZNF484Q5JVG2 852 aa16.82■□□□□ 0.28
RTN3-214ENST00000545432 MCTP2Q6DN12 878 aa16.82■□□□□ 0.28
RTN3-214ENST00000545432 B4GALNT3Q6L9W6 998 aa16.82■□□□□ 0.28
RTN3-214ENST00000545432 RALYLQ86SE5 291 aaKnown RBP16.82■□□□□ 0.28
RTN3-214ENST00000545432 TMTC2Q8N394 836 aa16.82■□□□□ 0.28
RTN3-214ENST00000545432 NKD2Q969F2 451 aaPredicted RBP16.82■□□□□ 0.28
RTN3-214ENST00000545432 SDF4Q9BRK5 362 aa16.82■□□□□ 0.28
RTN3-214ENST00000545432 IRAK3Q9Y616 596 aa16.82■□□□□ 0.28
RTN3-214ENST00000545432 EP300Q09472 2414 aaPredicted RBP16.82■□□□□ 0.28
RTN3-214ENST00000545432 HOXA2O43364 376 aa16.81■□□□□ 0.28
RTN3-214ENST00000545432 CLASP2O75122 1294 aaKnown RBP16.81■□□□□ 0.28
RTN3-214ENST00000545432 CCNE2O96020 404 aa16.81■□□□□ 0.28
RTN3-214ENST00000545432 ATP4AP20648 1035 aa16.81■□□□□ 0.28
RTN3-214ENST00000545432 ID4P47928 161 aa16.81■□□□□ 0.28
RTN3-214ENST00000545432 CEP55Q53EZ4 464 aa16.81■□□□□ 0.28
RTN3-214ENST00000545432 CES5AQ6NT32 575 aa16.81■□□□□ 0.28
RTN3-214ENST00000545432 LLGL2Q6P1M3 1020 aa16.81■□□□□ 0.28
RTN3-214ENST00000545432 SLC39A11Q8N1S5 342 aa16.81■□□□□ 0.28
RTN3-214ENST00000545432 PLCD3Q8N3E9 789 aa16.81■□□□□ 0.28
RTN3-214ENST00000545432 ZNF558Q96NG5 402 aa16.81■□□□□ 0.28
RTN3-214ENST00000545432 APOL5Q9BWW9 433 aa16.81■□□□□ 0.28
RTN3-214ENST00000545432 AGO4Q9HCK5 861 aaKnown RBP16.81■□□□□ 0.28
RTN3-214ENST00000545432 ENTPD7Q9NQZ7 604 aa16.81■□□□□ 0.28
RTN3-214ENST00000545432 SPG21Q9NZD8 308 aa16.81■□□□□ 0.28
RTN3-214ENST00000545432 DHX15O43143 795 aaKnown RBP16.8■□□□□ 0.28
RTN3-214ENST00000545432 NPR3P17342 541 aa16.8■□□□□ 0.28
RTN3-214ENST00000545432 KIAA1841Q6NSI8 718 aa16.8■□□□□ 0.28
RTN3-214ENST00000545432 NIPA1Q7RTP0 329 aa16.8■□□□□ 0.28
RTN3-214ENST00000545432 TMC7Q7Z402 723 aa16.8■□□□□ 0.28
RTN3-214ENST00000545432 FRMD5Q7Z6J6 570 aa16.8■□□□□ 0.28
RTN3-214ENST00000545432 MYL10Q9BUA6 226 aa16.8■□□□□ 0.28
RTN3-214ENST00000545432 SMOC2Q9H3U7 446 aa16.8■□□□□ 0.28
RTN3-214ENST00000545432 C22orf31O95567 290 aa16.79■□□□□ 0.28
RTN3-214ENST00000545432 SP100P23497 879 aaPredicted RBP16.79■□□□□ 0.28
RTN3-214ENST00000545432 SMC1AQ14683 1233 aaKnown RBP16.79■□□□□ 0.28
RTN3-214ENST00000545432 CWF19L1Q69YN2 538 aaKnown RBP16.79■□□□□ 0.28
RTN3-214ENST00000545432 ZNF598Q86UK7 904 aaKnown RBP16.79■□□□□ 0.28
RTN3-214ENST00000545432 CCDC60Q8IWA6 550 aaPredicted RBP16.79■□□□□ 0.28
RTN3-214ENST00000545432 ADSSL1Q8N142 457 aa16.79■□□□□ 0.28
RTN3-214ENST00000545432 ZNF710Q8N1W2 664 aa16.79■□□□□ 0.28
RTN3-214ENST00000545432 LRRC43Q8N309 656 aa16.79■□□□□ 0.28
RTN3-214ENST00000545432 LINC01465Q8N7H1 131 aa16.79■□□□□ 0.28
RTN3-214ENST00000545432 MAP4K1Q92918 833 aa16.79■□□□□ 0.28
RTN3-214ENST00000545432 GINS2Q9Y248 185 aa16.79■□□□□ 0.28
RTN3-214ENST00000545432 FOSP01100 380 aaPredicted RBP16.78■□□□□ 0.28
RTN3-214ENST00000545432 ASGR2P07307 311 aa16.78■□□□□ 0.28
RTN3-214ENST00000545432 AOC1P19801 751 aa16.78■□□□□ 0.28
RTN3-214ENST00000545432 CHMLP26374 656 aa16.78■□□□□ 0.28
RTN3-214ENST00000545432 LIFRP42702 1097 aa16.78■□□□□ 0.28
RTN3-214ENST00000545432 KIZQ2M2Z5 673 aa16.78■□□□□ 0.28
RTN3-214ENST00000545432 ECHDC2Q86YB7 292 aa16.78■□□□□ 0.28
RTN3-214ENST00000545432 SLC22A17Q8WUG5 538 aa16.78■□□□□ 0.28
RTN3-214ENST00000545432 OSMRQ99650 979 aa16.78■□□□□ 0.28
RTN3-214ENST00000545432 ADAMTS10Q9H324 1103 aa16.78■□□□□ 0.28
RTN3-214ENST00000545432 DZANK1Q9NVP4 752 aa16.78■□□□□ 0.28
RTN3-214ENST00000545432 LIMD1Q9UGP4 676 aa16.78■□□□□ 0.28
RTN3-214ENST00000545432 MAFBQ9Y5Q3 323 aaPredicted RBP16.78■□□□□ 0.28
RTN3-214ENST00000545432 A0A0U1RQF3 1178 aa16.77■□□□□ 0.28
RTN3-214ENST00000545432 SH2B2O14492 632 aaPredicted RBP16.77■□□□□ 0.28
RTN3-214ENST00000545432 EOMESO95936 686 aa16.77■□□□□ 0.28
RTN3-214ENST00000545432 CALM1P0DP23 149 aa16.77■□□□□ 0.28
RTN3-214ENST00000545432 CALM2P0DP24 149 aa16.77■□□□□ 0.28
RTN3-214ENST00000545432 CALM3P0DP25 149 aa16.77■□□□□ 0.28
RTN3-214ENST00000545432 GSPT1P15170 499 aaKnown RBP16.77■□□□□ 0.28
RTN3-214ENST00000545432 CLLU1OSQ5K130 101 aa16.77■□□□□ 0.28
RTN3-214ENST00000545432 ATAT1Q5SQI0 421 aa16.77■□□□□ 0.28
RTN3-214ENST00000545432 FAM160B1Q5W0V3 765 aa16.77■□□□□ 0.28
RTN3-214ENST00000545432 CCDC105Q8IYK2 499 aa16.77■□□□□ 0.28
RTN3-214ENST00000545432 CMTR1Q8N1G2 835 aaKnown RBP16.77■□□□□ 0.28
RTN3-214ENST00000545432 TDRD5Q8NAT2 981 aaKnown RBP16.77■□□□□ 0.28
RTN3-214ENST00000545432 RUFY2Q8WXA3 655 aa16.77■□□□□ 0.28
RTN3-214ENST00000545432 BBXQ8WY36 941 aaPredicted RBP16.77■□□□□ 0.28
RTN3-214ENST00000545432 RSPH1Q8WYR4 309 aa16.77■□□□□ 0.28
RTN3-214ENST00000545432 TMEM87BQ96K49 555 aa16.77■□□□□ 0.28
RTN3-214ENST00000545432 RIC8AQ9NPQ8 531 aa16.77■□□□□ 0.28
RTN3-214ENST00000545432 CYP26B1Q9NR63 512 aa16.77■□□□□ 0.28
RTN3-214ENST00000545432 TSHZ2Q9NRE2 1034 aa16.77■□□□□ 0.28
RTN3-214ENST00000545432 VPS13AQ96RL7 3174 aa16.77■□□□□ 0.28
RTN3-214ENST00000545432 SGSM2O43147 1006 aa16.76■□□□□ 0.27
RTN3-214ENST00000545432 PI15O43692 258 aa16.76■□□□□ 0.27
RTN3-214ENST00000545432 SREBF1P36956 1147 aa16.76■□□□□ 0.27
RTN3-214ENST00000545432 PBX3P40426 434 aa16.76■□□□□ 0.27
RTN3-214ENST00000545432 CLK2P49760 499 aaKnown RBP16.76■□□□□ 0.27
RTN3-214ENST00000545432 TYW1BQ6NUM6 668 aa16.76■□□□□ 0.27
RTN3-214ENST00000545432 PDXDC2PQ6P474 469 aa16.76■□□□□ 0.27
RTN3-214ENST00000545432 TMTC3Q6ZXV5 915 aa16.76■□□□□ 0.27
RTN3-214ENST00000545432 CRYGNQ8WXF5 182 aa16.76■□□□□ 0.27
RTN3-214ENST00000545432 RTP3Q9BQQ7 232 aa16.76■□□□□ 0.27
RTN3-214ENST00000545432 TRAIPQ9BWF2 469 aa16.76■□□□□ 0.27
RTN3-214ENST00000545432 SEMA4AQ9H3S1 761 aa16.76■□□□□ 0.27
RTN3-214ENST00000545432 ZNF302Q9NR11 478 aa16.76■□□□□ 0.27
RTN3-214ENST00000545432 MAGEB2O15479 319 aa16.75■□□□□ 0.27
RTN3-214ENST00000545432 CXCL14O95715 111 aa16.75■□□□□ 0.27
RTN3-214ENST00000545432 IBSPP21815 317 aaPredicted RBP16.75■□□□□ 0.27
RTN3-214ENST00000545432 EIF4BP23588 611 aaKnown RBP16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms