RNA–Protein interactions for RNA: ENST00000545425.2

FOXA1-202, Transcript of forkhead box A1, humanhuman

TSL 2

Gene FOXA1, Length 1,806 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-202ENST00000545425 CLUL1Q15846 466 aa25.38■■□□□ 1.65
FOXA1-202ENST00000545425 USP38Q8NB14 1042 aa25.38■■□□□ 1.65
FOXA1-202ENST00000545425 HDAC7Q8WUI4 952 aa25.38■■□□□ 1.65
FOXA1-202ENST00000545425 HSD17B14Q9BPX1 270 aa25.38■■□□□ 1.65
FOXA1-202ENST00000545425 ARHGEF10LQ9HCE6 1279 aa25.38■■□□□ 1.65
FOXA1-202ENST00000545425 NAGPAQ9UK23 515 aa25.38■■□□□ 1.65
FOXA1-202ENST00000545425 ODF2LQ9ULJ1 636 aa25.38■■□□□ 1.65
FOXA1-202ENST00000545425 DIS3Q9Y2L1 958 aaKnown RBP25.38■■□□□ 1.65
FOXA1-202ENST00000545425 RAD21O60216 631 aa25.37■■□□□ 1.65
FOXA1-202ENST00000545425 HOXD13P35453 343 aa25.37■■□□□ 1.65
FOXA1-202ENST00000545425 CASP5P51878 434 aa25.37■■□□□ 1.65
FOXA1-202ENST00000545425 SKOR1P84550 965 aa25.37■■□□□ 1.65
FOXA1-202ENST00000545425 CACNB1Q02641 598 aaPredicted RBP25.37■■□□□ 1.65
FOXA1-202ENST00000545425 CUL1Q13616 776 aa25.37■■□□□ 1.65
FOXA1-202ENST00000545425 NEK9Q8TD19 979 aa25.37■■□□□ 1.65
FOXA1-202ENST00000545425 SLC35C1Q96A29 364 aa25.37■■□□□ 1.65
FOXA1-202ENST00000545425 WDR11Q9BZH6 1224 aa25.37■■□□□ 1.65
FOXA1-202ENST00000545425 FAM13AO94988 1023 aa25.37■■□□□ 1.65
FOXA1-202ENST00000545425 KIF4AO95239 1232 aa25.37■■□□□ 1.65
FOXA1-202ENST00000545425 MYBP10242 640 aa25.37■■□□□ 1.65
FOXA1-202ENST00000545425 RPS12P25398 132 aaKnown RBP25.37■■□□□ 1.65
FOXA1-202ENST00000545425 STAT1P42224 750 aa25.37■■□□□ 1.65
FOXA1-202ENST00000545425 MATR3P43243 847 aaKnown RBP eCLIP25.37■■□□□ 1.65
FOXA1-202ENST00000545425 RBM5P52756 815 aaKnown RBP eCLIP25.37■■□□□ 1.65
FOXA1-202ENST00000545425 PSMC6P62333 389 aa25.37■■□□□ 1.65
FOXA1-202ENST00000545425 PPP2R5AQ15172 486 aa25.37■■□□□ 1.65
FOXA1-202ENST00000545425 EMC10Q5UCC4 262 aa25.37■■□□□ 1.65
FOXA1-202ENST00000545425 ALKBH5Q6P6C2 394 aaKnown RBP25.37■■□□□ 1.65
FOXA1-202ENST00000545425 ZNF571Q7Z3V5 609 aaPredicted RBP25.37■■□□□ 1.65
FOXA1-202ENST00000545425 KIAA0825Q8IV33 1275 aa25.37■■□□□ 1.65
FOXA1-202ENST00000545425 GSPT2Q8IYD1 628 aaKnown RBP25.37■■□□□ 1.65
FOXA1-202ENST00000545425 BHMT2Q9H2M3 363 aa25.37■■□□□ 1.65
FOXA1-202ENST00000545425 IGLV3-22A0A075B6J6 115 aa25.36■■□□□ 1.65
FOXA1-202ENST00000545425 AKAP3O75969 853 aa25.36■■□□□ 1.65
FOXA1-202ENST00000545425 HEXIM1O94992 359 aaKnown RBP25.36■■□□□ 1.65
FOXA1-202ENST00000545425 GCNT3O95395 438 aa25.36■■□□□ 1.65
FOXA1-202ENST00000545425 H2AFZP0C0S5 128 aa25.36■■□□□ 1.65
FOXA1-202ENST00000545425 SETQ01105 290 aaPredicted RBP25.36■■□□□ 1.65
FOXA1-202ENST00000545425 TCP10Q12799 353 aa25.36■■□□□ 1.65
FOXA1-202ENST00000545425 RINT1Q6NUQ1 792 aa25.36■■□□□ 1.65
FOXA1-202ENST00000545425 H2AFVQ71UI9 128 aa25.36■■□□□ 1.65
FOXA1-202ENST00000545425 SLFN11Q7Z7L1 901 aa25.36■■□□□ 1.65
FOXA1-202ENST00000545425 SLC5A5Q92911 643 aa25.36■■□□□ 1.65
FOXA1-202ENST00000545425 STAT2P52630 851 aa25.35■■□□□ 1.65
FOXA1-202ENST00000545425 PPP2R5EQ16537 467 aa25.35■■□□□ 1.65
FOXA1-202ENST00000545425 LRRC57Q8N9N7 239 aa25.35■■□□□ 1.65
FOXA1-202ENST00000545425 TMEM174Q8WUU8 243 aa25.35■■□□□ 1.65
FOXA1-202ENST00000545425 BORCS6Q96GS4 357 aa25.35■■□□□ 1.65
FOXA1-202ENST00000545425 P2RX7Q99572 595 aaKnown RBP25.35■■□□□ 1.65
FOXA1-202ENST00000545425 SUCLA2Q9P2R7 463 aaPredicted RBP25.35■■□□□ 1.65
FOXA1-202ENST00000545425 PRR12Q9ULL5 1215 aa25.35■■□□□ 1.65
FOXA1-202ENST00000545425 RRP15Q9Y3B9 282 aaKnown RBP25.35■■□□□ 1.65
FOXA1-202ENST00000545425 FRMPD4Q14CM0 1322 aa25.35■■□□□ 1.65
FOXA1-202ENST00000545425 FTCDO95954 541 aa25.35■■□□□ 1.65
FOXA1-202ENST00000545425 ERCC3P19447 782 aa25.35■■□□□ 1.65
FOXA1-202ENST00000545425 SLC9A1P19634 815 aa25.35■■□□□ 1.65
FOXA1-202ENST00000545425 ZNF131P52739 623 aa25.35■■□□□ 1.65
FOXA1-202ENST00000545425 HS2ST1Q7LGA3 356 aa25.35■■□□□ 1.65
FOXA1-202ENST00000545425 NACC1Q96RE7 527 aa25.35■■□□□ 1.65
FOXA1-202ENST00000545425 PARVGQ9HBI0 331 aa25.35■■□□□ 1.65
FOXA1-202ENST00000545425 GOPCQ9HD26 462 aa25.35■■□□□ 1.65
FOXA1-202ENST00000545425 SIX2Q9NPC8 291 aa25.35■■□□□ 1.65
FOXA1-202ENST00000545425 CNOT7Q9UIV1 285 aaKnown RBP25.35■■□□□ 1.65
FOXA1-202ENST00000545425 CEP350Q5VT06 3117 aa25.35■■□□□ 1.65
FOXA1-202ENST00000545425 SHTN1A0MZ66 631 aa25.34■■□□□ 1.65
FOXA1-202ENST00000545425 ALCAMQ13740 583 aa25.34■■□□□ 1.65
FOXA1-202ENST00000545425 CFAP58Q5T655 872 aa25.34■■□□□ 1.65
FOXA1-202ENST00000545425 C1orf186Q6ZWK4 172 aa25.34■■□□□ 1.65
FOXA1-202ENST00000545425 OTOP1Q7RTM1 612 aa25.34■■□□□ 1.65
FOXA1-202ENST00000545425 SCFD2Q8WU76 684 aa25.34■■□□□ 1.65
FOXA1-202ENST00000545425 CHURC1Q8WUH1 139 aa25.34■■□□□ 1.65
FOXA1-202ENST00000545425 PSMB7Q99436 277 aa25.34■■□□□ 1.65
FOXA1-202ENST00000545425 GCNT4Q9P109 453 aa25.34■■□□□ 1.65
FOXA1-202ENST00000545425 MRPL11Q9Y3B7 192 aaKnown RBP25.34■■□□□ 1.65
FOXA1-202ENST00000545425 GCOM1H8Y6P7 765 aaPredicted RBP25.33■■□□□ 1.65
FOXA1-202ENST00000545425 MEIS1O00470 390 aa25.33■■□□□ 1.65
FOXA1-202ENST00000545425 OPLAHO14841 1288 aa25.33■■□□□ 1.65
FOXA1-202ENST00000545425 PSMD10O75832 226 aa25.33■■□□□ 1.65
FOXA1-202ENST00000545425 VIL1P09327 827 aaKnown RBP25.33■■□□□ 1.65
FOXA1-202ENST00000545425 POLR2MP0CAP2 368 aa25.33■■□□□ 1.65
FOXA1-202ENST00000545425 SLC7A5Q01650 507 aa25.33■■□□□ 1.65
FOXA1-202ENST00000545425 ARID5AQ03989 594 aa25.33■■□□□ 1.65
FOXA1-202ENST00000545425 USH1GQ495M9 461 aa25.33■■□□□ 1.65
FOXA1-202ENST00000545425 LRIG3Q6UXM1 1119 aa25.33■■□□□ 1.65
FOXA1-202ENST00000545425 SLC9A9Q8IVB4 645 aa25.33■■□□□ 1.65
FOXA1-202ENST00000545425 FAM186BQ8IYM0 893 aa25.33■■□□□ 1.65
FOXA1-202ENST00000545425 IQCKQ8N0W5 287 aa25.33■■□□□ 1.65
FOXA1-202ENST00000545425 RUSC1Q9BVN2 902 aa25.33■■□□□ 1.65
FOXA1-202ENST00000545425 STK33Q9BYT3 514 aa25.33■■□□□ 1.65
FOXA1-202ENST00000545425 ISCUQ9H1K1 167 aa25.33■■□□□ 1.65
FOXA1-202ENST00000545425 DEFB129Q9H1M3 183 aa25.33■■□□□ 1.65
FOXA1-202ENST00000545425 TMOD2Q9NZR1 351 aa25.33■■□□□ 1.65
FOXA1-202ENST00000545425 TTC7AQ9ULT0 858 aaPredicted RBP25.33■■□□□ 1.65
FOXA1-202ENST00000545425 ZBTB12Q9Y330 459 aaPredicted RBP25.33■■□□□ 1.65
FOXA1-202ENST00000545425 SRRM3A6NNA2 597 aaPredicted RBP25.33■■□□□ 1.64
FOXA1-202ENST00000545425 PGRMC1O00264 195 aaKnown RBP25.33■■□□□ 1.64
FOXA1-202ENST00000545425 DCAF17Q5H9S7 520 aaPredicted RBP25.33■■□□□ 1.64
FOXA1-202ENST00000545425 FAM160B2Q86V87 743 aa25.33■■□□□ 1.64
FOXA1-202ENST00000545425 MS4A14Q96JA4 679 aa25.33■■□□□ 1.64
FOXA1-202ENST00000545425 CAPS2Q9BXY5 557 aa25.33■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms