RNA–Protein interactions for RNA: ENST00000545215.5

LDHA-223, Transcript of lactate dehydrogenase A, humanhuman

TSL 1 (best)

Gene LDHA, Length 1,340 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-223ENST00000545215 PURAQ00577 322 aaKnown RBP8.07□□□□□ -1.12
LDHA-223ENST00000545215 FAM47CQ5HY64 1035 aa8.07□□□□□ -1.12
LDHA-223ENST00000545215 WDR44Q5JSH3 913 aa8.07□□□□□ -1.12
LDHA-223ENST00000545215 ANKRD54Q6NXT1 300 aa8.07□□□□□ -1.12
LDHA-223ENST00000545215 SYCE2Q6PIF2 218 aa8.07□□□□□ -1.12
LDHA-223ENST00000545215 SNX29Q8TEQ0 813 aa8.07□□□□□ -1.12
LDHA-223ENST00000545215 ATG4CQ96DT6 458 aa8.07□□□□□ -1.12
LDHA-223ENST00000545215 OSBPL7Q9BZF2 842 aa8.07□□□□□ -1.12
LDHA-223ENST00000545215 POMKQ9H5K3 350 aa8.07□□□□□ -1.12
LDHA-223ENST00000545215 C12orf49Q9H741 205 aa8.07□□□□□ -1.12
LDHA-223ENST00000545215 TBC1D17Q9HA65 648 aa8.07□□□□□ -1.12
LDHA-223ENST00000545215 CAPN10Q9HC96 672 aa8.07□□□□□ -1.12
LDHA-223ENST00000545215 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.07□□□□□ -1.12
LDHA-223ENST00000545215 UBR5O95071 2799 aaPredicted RBP8.07□□□□□ -1.12
LDHA-223ENST00000545215 CFAP46Q8IYW2 2715 aa8.07□□□□□ -1.12
LDHA-223ENST00000545215 SIPA1L1O43166 1804 aa8.07□□□□□ -1.12
LDHA-223ENST00000545215 IPO8O15397 1037 aaKnown RBP8.06□□□□□ -1.12
LDHA-223ENST00000545215 GLULP15104 373 aa8.06□□□□□ -1.12
LDHA-223ENST00000545215 PTGS1P23219 599 aa8.06□□□□□ -1.12
LDHA-223ENST00000545215 RARSP54136 660 aaKnown RBP8.06□□□□□ -1.12
LDHA-223ENST00000545215 CSTF1Q05048 431 aaKnown RBP8.06□□□□□ -1.12
LDHA-223ENST00000545215 RBL2Q08999 1139 aa8.06□□□□□ -1.12
LDHA-223ENST00000545215 TROAPQ12815 778 aa8.06□□□□□ -1.12
LDHA-223ENST00000545215 KCNC3Q14003 757 aa8.06□□□□□ -1.12
LDHA-223ENST00000545215 PSAPL1Q6NUJ1 521 aa8.06□□□□□ -1.12
LDHA-223ENST00000545215 PI16Q6UXB8 463 aa8.06□□□□□ -1.12
LDHA-223ENST00000545215 ARMCX2Q7L311 632 aa8.06□□□□□ -1.12
LDHA-223ENST00000545215 BTLAQ7Z6A9 289 aa8.06□□□□□ -1.12
LDHA-223ENST00000545215 FAM177A1Q8N128 213 aaPredicted RBP8.06□□□□□ -1.12
LDHA-223ENST00000545215 LINC00528Q8N1L1 170 aa8.06□□□□□ -1.12
LDHA-223ENST00000545215 ZNF513Q8N8E2 541 aaPredicted RBP8.06□□□□□ -1.12
LDHA-223ENST00000545215 VGLL2Q8N8G2 317 aa8.06□□□□□ -1.12
LDHA-223ENST00000545215 SPPL3Q8TCT6 385 aa8.06□□□□□ -1.12
LDHA-223ENST00000545215 EPS8L3Q8TE67 593 aaKnown RBP8.06□□□□□ -1.12
LDHA-223ENST00000545215 HPS1Q92902 700 aa8.06□□□□□ -1.12
LDHA-223ENST00000545215 P2RX5Q93086 422 aa8.06□□□□□ -1.12
LDHA-223ENST00000545215 IL17RAQ96F46 866 aa8.06□□□□□ -1.12
LDHA-223ENST00000545215 NECTIN4Q96NY8 510 aa8.06□□□□□ -1.12
LDHA-223ENST00000545215 TANGO6Q9C0B7 1094 aa8.06□□□□□ -1.12
LDHA-223ENST00000545215 POLMQ9NP87 494 aaPredicted RBP8.06□□□□□ -1.12
LDHA-223ENST00000545215 DDX41Q9UJV9 622 aaKnown RBP8.06□□□□□ -1.12
LDHA-223ENST00000545215 RCAN3Q9UKA8 241 aa8.06□□□□□ -1.12
LDHA-223ENST00000545215 FNDC3AQ9Y2H6 1198 aaKnown RBP8.06□□□□□ -1.12
LDHA-223ENST00000545215 USP20Q9Y2K6 914 aa8.06□□□□□ -1.12
LDHA-223ENST00000545215 MROH7-TTC4A0A0A0MT08 1334 aa8.06□□□□□ -1.12
LDHA-223ENST00000545215 PTPRCP08575 1304 aa8.06□□□□□ -1.12
LDHA-223ENST00000545215 F6X3S4 739 aa8.05□□□□□ -1.12
LDHA-223ENST00000545215 RBAK-RBAKDNI3L0D1 243 aa8.05□□□□□ -1.12
LDHA-223ENST00000545215 PER2O15055 1255 aa8.05□□□□□ -1.12
LDHA-223ENST00000545215 WDR46O15213 610 aaKnown RBP8.05□□□□□ -1.12
LDHA-223ENST00000545215 LAMTOR5O43504 91 aa8.05□□□□□ -1.12
LDHA-223ENST00000545215 UPP2O95045 317 aa8.05□□□□□ -1.12
LDHA-223ENST00000545215 CKBP12277 381 aa8.05□□□□□ -1.12
LDHA-223ENST00000545215 HOXB8P17481 243 aaPredicted RBP8.05□□□□□ -1.12
LDHA-223ENST00000545215 GRNP28799 593 aaKnown RBP8.05□□□□□ -1.12
LDHA-223ENST00000545215 COPB2P35606 906 aa8.05□□□□□ -1.12
LDHA-223ENST00000545215 POU4F2Q12837 409 aa8.05□□□□□ -1.12
LDHA-223ENST00000545215 ZNF438Q7Z4V0 828 aa8.05□□□□□ -1.12
LDHA-223ENST00000545215 TDRD5Q8NAT2 981 aaKnown RBP8.05□□□□□ -1.12
LDHA-223ENST00000545215 RNF217Q8TC41 542 aa8.05□□□□□ -1.12
LDHA-223ENST00000545215 ARHGAP45Q92619 1136 aa8.05□□□□□ -1.12
LDHA-223ENST00000545215 DDX11Q96FC9 970 aa8.05□□□□□ -1.12
LDHA-223ENST00000545215 LRIG1Q96JA1 1093 aa8.05□□□□□ -1.12
LDHA-223ENST00000545215 FGD4Q96M96 766 aa8.05□□□□□ -1.12
LDHA-223ENST00000545215 CTAGE1Q96RT6 745 aa8.05□□□□□ -1.12
LDHA-223ENST00000545215 UBL7Q96S82 380 aaPredicted RBP8.05□□□□□ -1.12
LDHA-223ENST00000545215 CDCA3Q99618 268 aaPredicted RBP8.05□□□□□ -1.12
LDHA-223ENST00000545215 APOL5Q9BWW9 433 aa8.05□□□□□ -1.12
LDHA-223ENST00000545215 SMC4Q9NTJ3 1288 aa8.05□□□□□ -1.12
LDHA-223ENST00000545215 RAB23Q9ULC3 237 aa8.05□□□□□ -1.12
LDHA-223ENST00000545215 ADAMTS5Q9UNA0 930 aa8.05□□□□□ -1.12
LDHA-223ENST00000545215 NEUROG3Q9Y4Z2 214 aa8.05□□□□□ -1.12
LDHA-223ENST00000545215 FBN2P35556 2912 aa8.05□□□□□ -1.12
LDHA-223ENST00000545215 MYH13Q9UKX3 1938 aa8.05□□□□□ -1.12
LDHA-223ENST00000545215 ITGB1P05556 798 aa8.04□□□□□ -1.12
LDHA-223ENST00000545215 IFIT1P09914 478 aaKnown RBP8.04□□□□□ -1.12
LDHA-223ENST00000545215 FGFR2P21802 821 aa8.04□□□□□ -1.12
LDHA-223ENST00000545215 STAT3P40763 770 aa8.04□□□□□ -1.12
LDHA-223ENST00000545215 TECP42680 631 aa8.04□□□□□ -1.12
LDHA-223ENST00000545215 RACK1P63244 317 aaKnown RBP8.04□□□□□ -1.12
LDHA-223ENST00000545215 RAB3GAP1Q15042 981 aa8.04□□□□□ -1.12
LDHA-223ENST00000545215 PTGISQ16647 500 aa8.04□□□□□ -1.12
LDHA-223ENST00000545215 DUSP6Q16828 381 aa8.04□□□□□ -1.12
LDHA-223ENST00000545215 DZIP1Q86YF9 867 aaKnown RBP8.04□□□□□ -1.12
LDHA-223ENST00000545215 CCDC144CPQ8IYA2 1237 aa8.04□□□□□ -1.12
LDHA-223ENST00000545215 ZNF843Q8N446 348 aa8.04□□□□□ -1.12
LDHA-223ENST00000545215 DBF4BQ8NFT6 615 aa8.04□□□□□ -1.12
LDHA-223ENST00000545215 PPP1R13LQ8WUF5 828 aa8.04□□□□□ -1.12
LDHA-223ENST00000545215 HNRNPLLQ8WVV9 542 aaKnown RBP8.04□□□□□ -1.12
LDHA-223ENST00000545215 SSH1Q8WYL5 1049 aa8.04□□□□□ -1.12
LDHA-223ENST00000545215 MTG1Q9BT17 334 aaPredicted RBP8.04□□□□□ -1.12
LDHA-223ENST00000545215 CYP26B1Q9NR63 512 aa8.04□□□□□ -1.12
LDHA-223ENST00000545215 CDH22Q9UJ99 828 aa8.04□□□□□ -1.12
LDHA-223ENST00000545215 MSRB2Q9Y3D2 182 aa8.04□□□□□ -1.12
LDHA-223ENST00000545215 ITPR3Q14573 2671 aa8.04□□□□□ -1.12
LDHA-223ENST00000545215 PHACTR2O75167 634 aa8.03□□□□□ -1.12
LDHA-223ENST00000545215 FLOT1O75955 427 aa8.03□□□□□ -1.12
LDHA-223ENST00000545215 SRGAP2BP0DMP2 458 aa8.03□□□□□ -1.12
LDHA-223ENST00000545215 ZNF252P-AS1Q0IIN9 211 aa8.03□□□□□ -1.12
LDHA-223ENST00000545215 MBTPS1Q14703 1052 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms