RNA–Protein interactions for RNA: ENST00000545083.1

CHD4-212, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 3

Gene CHD4, Length 511 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-212ENST00000545083 PLPPR4Q7Z2D5 763 aa10.76□□□□□ -0.69
CHD4-212ENST00000545083 SLC39A11Q8N1S5 342 aa10.76□□□□□ -0.69
CHD4-212ENST00000545083 CYP2W1Q8TAV3 490 aa10.76□□□□□ -0.69
CHD4-212ENST00000545083 AUTS2Q8WXX7 1259 aa10.76□□□□□ -0.69
CHD4-212ENST00000545083 AZI2Q9H6S1 392 aa10.76□□□□□ -0.69
CHD4-212ENST00000545083 ELAC1Q9H777 363 aaKnown RBP10.76□□□□□ -0.69
CHD4-212ENST00000545083 JADE2Q9NQC1 790 aa10.76□□□□□ -0.69
CHD4-212ENST00000545083 DIAPH3Q9NSV4 1193 aa10.76□□□□□ -0.69
CHD4-212ENST00000545083 TAF6LQ9Y6J9 622 aa10.76□□□□□ -0.69
CHD4-212ENST00000545083 R4GN57 208 aa10.76□□□□□ -0.69
CHD4-212ENST00000545083 EOMESO95936 686 aa10.75□□□□□ -0.69
CHD4-212ENST00000545083 LMNAP02545 664 aaKnown RBP10.75□□□□□ -0.69
CHD4-212ENST00000545083 EPCAMP16422 314 aa10.75□□□□□ -0.69
CHD4-212ENST00000545083 PPM1AP35813 382 aa10.75□□□□□ -0.69
CHD4-212ENST00000545083 KRT17Q04695 432 aa10.75□□□□□ -0.69
CHD4-212ENST00000545083 ITGB3BPQ13352 177 aaPredicted RBP10.75□□□□□ -0.69
CHD4-212ENST00000545083 SMC1AQ14683 1233 aaKnown RBP10.75□□□□□ -0.69
CHD4-212ENST00000545083 KIZQ2M2Z5 673 aa10.75□□□□□ -0.69
CHD4-212ENST00000545083 CLLU1OSQ5K130 101 aa10.75□□□□□ -0.69
CHD4-212ENST00000545083 LRRC43Q8N309 656 aa10.75□□□□□ -0.69
CHD4-212ENST00000545083 KCNG4Q8TDN1 519 aa10.75□□□□□ -0.69
CHD4-212ENST00000545083 CNTNAP3BQ96NU0 1288 aa10.75□□□□□ -0.69
CHD4-212ENST00000545083 OSMRQ99650 979 aa10.75□□□□□ -0.69
CHD4-212ENST00000545083 MYL10Q9BUA6 226 aa10.75□□□□□ -0.69
CHD4-212ENST00000545083 SPZ1Q9BXG8 430 aa10.75□□□□□ -0.69
CHD4-212ENST00000545083 CNTNAP3Q9BZ76 1288 aa10.75□□□□□ -0.69
CHD4-212ENST00000545083 KCNH7Q9NS40 1196 aa10.75□□□□□ -0.69
CHD4-212ENST00000545083 SPG21Q9NZD8 308 aa10.75□□□□□ -0.69
CHD4-212ENST00000545083 DAXXQ9UER7 740 aaPredicted RBP10.75□□□□□ -0.69
CHD4-212ENST00000545083 DBR1Q9UK59 544 aaKnown RBP10.75□□□□□ -0.69
CHD4-212ENST00000545083 USTQ9Y2C2 406 aa10.75□□□□□ -0.69
CHD4-212ENST00000545083 ZBTB42B2RXF5 422 aa10.74□□□□□ -0.69
CHD4-212ENST00000545083 NT5C1B-RDH14C9J2C7 533 aa10.74□□□□□ -0.69
CHD4-212ENST00000545083 GPR182O15218 404 aa10.74□□□□□ -0.69
CHD4-212ENST00000545083 MAFGO15525 162 aa10.74□□□□□ -0.69
CHD4-212ENST00000545083 NARSO43776 548 aaKnown RBP10.74□□□□□ -0.69
CHD4-212ENST00000545083 ATG7O95352 703 aa10.74□□□□□ -0.69
CHD4-212ENST00000545083 PLEKHA8P1O95397 391 aa10.74□□□□□ -0.69
CHD4-212ENST00000545083 CA8P35219 290 aa10.74□□□□□ -0.69
CHD4-212ENST00000545083 WTAPQ15007 396 aa10.74□□□□□ -0.69
CHD4-212ENST00000545083 ATAT1Q5SQI0 421 aa10.74□□□□□ -0.69
CHD4-212ENST00000545083 TMC5Q6UXY8 1006 aa10.74□□□□□ -0.69
CHD4-212ENST00000545083 TMEM173Q86WV6 379 aaPredicted RBP10.74□□□□□ -0.69
CHD4-212ENST00000545083 PLEKHM2Q8IWE5 1019 aa10.74□□□□□ -0.69
CHD4-212ENST00000545083 SIX5Q8N196 739 aa10.74□□□□□ -0.69
CHD4-212ENST00000545083 PLCD3Q8N3E9 789 aa10.74□□□□□ -0.69
CHD4-212ENST00000545083 TNPO1Q92973 898 aaKnown RBP10.74□□□□□ -0.69
CHD4-212ENST00000545083 RRP36Q96EU6 259 aaKnown RBP10.74□□□□□ -0.69
CHD4-212ENST00000545083 RTP3Q9BQQ7 232 aa10.74□□□□□ -0.69
CHD4-212ENST00000545083 PSTPIP2Q9H939 334 aa10.74□□□□□ -0.69
CHD4-212ENST00000545083 CYP26B1Q9NR63 512 aa10.74□□□□□ -0.69
CHD4-212ENST00000545083 RNF216Q9NWF9 866 aaPredicted RBP10.74□□□□□ -0.69
CHD4-212ENST00000545083 DUSP12Q9UNI6 340 aa10.74□□□□□ -0.69
CHD4-212ENST00000545083 IGKV6D-21A0A0A0MT36 114 aa10.73□□□□□ -0.69
CHD4-212ENST00000545083 hCG_1642624A0A1W2PR95 340 aa10.73□□□□□ -0.69
CHD4-212ENST00000545083 GPR32O75388 356 aa10.73□□□□□ -0.69
CHD4-212ENST00000545083 CXCL14O95715 111 aa10.73□□□□□ -0.69
CHD4-212ENST00000545083 CCNE2O96020 404 aa10.73□□□□□ -0.69
CHD4-212ENST00000545083 VTNP04004 478 aa10.73□□□□□ -0.69
CHD4-212ENST00000545083 CYP21A2P08686 494 aa10.73□□□□□ -0.69
CHD4-212ENST00000545083 METAP2P50579 478 aaKnown RBP eCLIP10.73□□□□□ -0.69
CHD4-212ENST00000545083 CRYBB1P53674 252 aaPredicted RBP10.73□□□□□ -0.69
CHD4-212ENST00000545083 ANTXR2P58335 489 aa10.73□□□□□ -0.69
CHD4-212ENST00000545083 HDAC1Q13547 482 aaPredicted RBP10.73□□□□□ -0.69
CHD4-212ENST00000545083 TDGQ13569 410 aa10.73□□□□□ -0.69
CHD4-212ENST00000545083 PUM1Q14671 1186 aaKnown RBP eCLIP10.73□□□□□ -0.69
CHD4-212ENST00000545083 FAM43BQ6ZT52 329 aaPredicted RBP10.73□□□□□ -0.69
CHD4-212ENST00000545083 ECHDC2Q86YB7 292 aa10.73□□□□□ -0.69
CHD4-212ENST00000545083 CCDC60Q8IWA6 550 aaPredicted RBP10.73□□□□□ -0.69
CHD4-212ENST00000545083 CMTR1Q8N1G2 835 aaKnown RBP10.73□□□□□ -0.69
CHD4-212ENST00000545083 DCLK2Q8N568 766 aa10.73□□□□□ -0.69
CHD4-212ENST00000545083 SRBD1Q8N5C6 995 aaKnown RBP10.73□□□□□ -0.69
CHD4-212ENST00000545083 SLC22A17Q8WUG5 538 aa10.73□□□□□ -0.69
CHD4-212ENST00000545083 RIN2Q8WYP3 895 aaPredicted RBP10.73□□□□□ -0.69
CHD4-212ENST00000545083 MXRA8Q9BRK3 442 aa10.73□□□□□ -0.69
CHD4-212ENST00000545083 ZBP1Q9H171 429 aa10.73□□□□□ -0.69
CHD4-212ENST00000545083 KCNK12Q9HB15 430 aa10.73□□□□□ -0.69
CHD4-212ENST00000545083 DZANK1Q9NVP4 752 aa10.73□□□□□ -0.69
CHD4-212ENST00000545083 DLL3Q9NYJ7 618 aa10.73□□□□□ -0.69
CHD4-212ENST00000545083 FBXL21Q9UKT6 434 aa10.73□□□□□ -0.69
CHD4-212ENST00000545083 PCDHA6Q9UN73 950 aa10.73□□□□□ -0.69
CHD4-212ENST00000545083 PCDHA8Q9Y5H6 950 aa10.73□□□□□ -0.69
CHD4-212ENST00000545083 NFASCO94856 1347 aa10.73□□□□□ -0.69
CHD4-212ENST00000545083 DENND4AQ7Z401 1863 aa10.72□□□□□ -0.69
CHD4-212ENST00000545083 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.72□□□□□ -0.69
CHD4-212ENST00000545083 ERICH2A1L162 156 aa10.72□□□□□ -0.69
CHD4-212ENST00000545083 KRBA1A5PL33 1030 aa10.72□□□□□ -0.69
CHD4-212ENST00000545083 HOXA2O43364 376 aa10.72□□□□□ -0.69
CHD4-212ENST00000545083 HBP1O60381 514 aa10.72□□□□□ -0.69
CHD4-212ENST00000545083 C22orf31O95567 290 aa10.72□□□□□ -0.69
CHD4-212ENST00000545083 ATP4AP20648 1035 aa10.72□□□□□ -0.69
CHD4-212ENST00000545083 TRDNQ13061 729 aa10.72□□□□□ -0.69
CHD4-212ENST00000545083 ODR4Q5SWX8 454 aa10.72□□□□□ -0.69
CHD4-212ENST00000545083 ABHD15Q6UXT9 468 aa10.72□□□□□ -0.69
CHD4-212ENST00000545083 CATIPQ7Z7H3 387 aa10.72□□□□□ -0.69
CHD4-212ENST00000545083 ABI1Q8IZP0 508 aa10.72□□□□□ -0.69
CHD4-212ENST00000545083 VPS52Q8N1B4 723 aa10.72□□□□□ -0.69
CHD4-212ENST00000545083 RNF169Q8NCN4 708 aa10.72□□□□□ -0.69
CHD4-212ENST00000545083 HELQQ8TDG4 1101 aa10.72□□□□□ -0.69
CHD4-212ENST00000545083 IGDCC4Q8TDY8 1250 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms