RNA–Protein interactions for RNA: ENST00000545015.1

POLE-222, Transcript of DNA polymerase epsilon, catalytic subunit, human

TSL 2

Gene POLE, Length 366 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
POLE-222	ENST00000545015	EPHA7	Q15375	998 aa		15.06	■□□□□ 0
POLE-222	ENST00000545015	POTED	Q86YR6	584 aa		15.06	■□□□□ 0
POLE-222	ENST00000545015	METTL13	Q8N6R0	699 aa		15.06	■□□□□ 0
POLE-222	ENST00000545015	ATXN2L	Q8WWM7	1075 aa	Known RBP	15.06	■□□□□ 0
POLE-222	ENST00000545015	CLP1	Q92989	425 aa	Known RBP	15.06	■□□□□ 0
POLE-222	ENST00000545015	WDR81	Q562E7	1941 aa		15.05	■□□□□ 0
POLE-222	ENST00000545015	C5orf67	F2Z3F1	127 aa		15.05	■□□□□ -0
POLE-222	ENST00000545015	UPP2	O95045	317 aa		15.05	■□□□□ -0
POLE-222	ENST00000545015	VTN	P04004	478 aa		15.05	■□□□□ -0
POLE-222	ENST00000545015	STAG3L1	P0CL83	205 aa		15.05	■□□□□ -0
POLE-222	ENST00000545015	CLCN3	P51790	818 aa		15.05	■□□□□ -0
POLE-222	ENST00000545015	TBC1D8B	Q0IIM8	1120 aa		15.05	■□□□□ -0
POLE-222	ENST00000545015	KIZ	Q2M2Z5	673 aa		15.05	■□□□□ -0
POLE-222	ENST00000545015	ANO5	Q75V66	913 aa		15.05	■□□□□ -0
POLE-222	ENST00000545015	FAM228A	Q86W67	206 aa		15.05	■□□□□ -0
POLE-222	ENST00000545015	C4orf19	Q8IY42	314 aa		15.05	■□□□□ -0
POLE-222	ENST00000545015	FBXO18	Q8NFZ0	1043 aa		15.05	■□□□□ -0
POLE-222	ENST00000545015	OSMR	Q99650	979 aa		15.05	■□□□□ -0
POLE-222	ENST00000545015	JPH2	Q9BR39	696 aa	Predicted RBP	15.05	■□□□□ -0
POLE-222	ENST00000545015	C17orf80	Q9BSJ5	609 aa		15.05	■□□□□ -0
POLE-222	ENST00000545015	FOXP1	Q9H334	677 aa	Predicted RBP	15.05	■□□□□ -0
POLE-222	ENST00000545015	RGS18	Q9NS28	235 aa		15.05	■□□□□ -0
POLE-222	ENST00000545015	C1orf112	Q9NSG2	853 aa		15.05	■□□□□ -0
POLE-222	ENST00000545015	RNF216	Q9NWF9	866 aa	Predicted RBP	15.05	■□□□□ -0
POLE-222	ENST00000545015	RWDD3	Q9Y3V2	267 aa		15.05	■□□□□ -0
POLE-222	ENST00000545015	ADGRA3	Q8IWK6	1321 aa		15.05	■□□□□ -0
POLE-222	ENST00000545015		H3BNC9	293 aa		15.04	■□□□□ -0
POLE-222	ENST00000545015	MAF	O75444	373 aa	Predicted RBP	15.04	■□□□□ -0
POLE-222	ENST00000545015	LYPLA2	O95372	231 aa		15.04	■□□□□ -0
POLE-222	ENST00000545015	RB1	P06400	928 aa		15.04	■□□□□ -0
POLE-222	ENST00000545015	EIF4B	P23588	611 aa	Known RBP	15.04	■□□□□ -0
POLE-222	ENST00000545015	SARS	P49591	514 aa	Known RBP	15.04	■□□□□ -0
POLE-222	ENST00000545015	GPC3	P51654	580 aa		15.04	■□□□□ -0
POLE-222	ENST00000545015	NLRP11	P59045	1033 aa	Known RBP	15.04	■□□□□ -0
POLE-222	ENST00000545015	FAM189B	P81408	668 aa		15.04	■□□□□ -0
POLE-222	ENST00000545015	ORC2	Q13416	577 aa	Predicted RBP	15.04	■□□□□ -0
POLE-222	ENST00000545015	DSC3	Q14574	896 aa		15.04	■□□□□ -0
POLE-222	ENST00000545015	SAFB	Q15424	915 aa	Known RBP eCLIP	15.04	■□□□□ -0
POLE-222	ENST00000545015	TMEM266	Q2M3C6	531 aa		15.04	■□□□□ -0
POLE-222	ENST00000545015	EPC2	Q52LR7	807 aa		15.04	■□□□□ -0
POLE-222	ENST00000545015	TRMT1L	Q7Z2T5	733 aa	Known RBP	15.04	■□□□□ -0
POLE-222	ENST00000545015	TMEM192	Q8IY95	271 aa		15.04	■□□□□ -0
POLE-222	ENST00000545015	EXOC8	Q8IYI6	725 aa		15.04	■□□□□ -0
POLE-222	ENST00000545015	CMTR2	Q8IYT2	770 aa	Known RBP	15.04	■□□□□ -0
POLE-222	ENST00000545015	LRRC71	Q8N4P6	559 aa		15.04	■□□□□ -0
POLE-222	ENST00000545015	FIBCD1	Q8N539	461 aa		15.04	■□□□□ -0
POLE-222	ENST00000545015	BANK1	Q8NDB2	785 aa		15.04	■□□□□ -0
POLE-222	ENST00000545015	FBXO22	Q8NEZ5	403 aa		15.04	■□□□□ -0
POLE-222	ENST00000545015	C8orf76	Q96K31	380 aa		15.04	■□□□□ -0
POLE-222	ENST00000545015	MTMR9	Q96QG7	549 aa		15.04	■□□□□ -0
POLE-222	ENST00000545015	THEG	Q9P2T0	379 aa		15.04	■□□□□ -0
POLE-222	ENST00000545015	SEPT9	Q9UHD8	586 aa	Predicted RBP	15.04	■□□□□ -0
POLE-222	ENST00000545015	ST3GAL5	Q9UNP4	418 aa		15.04	■□□□□ -0
POLE-222	ENST00000545015	AKT3	Q9Y243	479 aa		15.04	■□□□□ -0
POLE-222	ENST00000545015	DDX11L8	A8MPP1	907 aa		15.03	■□□□□ -0
POLE-222	ENST00000545015		C9IYK1	514 aa		15.03	■□□□□ -0
POLE-222	ENST00000545015	WNT7A	O00755	349 aa		15.03	■□□□□ -0
POLE-222	ENST00000545015	ST18	O60284	1047 aa		15.03	■□□□□ -0
POLE-222	ENST00000545015	MGEA5	O60502	916 aa		15.03	■□□□□ -0
POLE-222	ENST00000545015	DARS	P14868	501 aa	Known RBP	15.03	■□□□□ -0
POLE-222	ENST00000545015	NFX1	Q12986	1120 aa	Known RBP	15.03	■□□□□ -0
POLE-222	ENST00000545015	CALCRL	Q16602	461 aa		15.03	■□□□□ -0
POLE-222	ENST00000545015	MTERF2	Q49AM1	385 aa		15.03	■□□□□ -0
POLE-222	ENST00000545015	SLC24A5	Q71RS6	500 aa		15.03	■□□□□ -0
POLE-222	ENST00000545015	NEK9	Q8TD19	979 aa		15.03	■□□□□ -0
POLE-222	ENST00000545015	GDPD5	Q8WTR4	605 aa		15.03	■□□□□ -0
POLE-222	ENST00000545015	HSD17B14	Q9BPX1	270 aa		15.03	■□□□□ -0
POLE-222	ENST00000545015	DHX33	Q9H6R0	707 aa	Known RBP	15.03	■□□□□ -0
POLE-222	ENST00000545015	ELAC1	Q9H777	363 aa	Known RBP	15.03	■□□□□ -0
POLE-222	ENST00000545015	ZSWIM4	Q9H7M6	989 aa		15.03	■□□□□ -0
POLE-222	ENST00000545015	UPF2	Q9HAU5	1272 aa	Known RBP	15.03	■□□□□ -0
POLE-222	ENST00000545015	PRDM6	Q9NQX0	595 aa		15.03	■□□□□ -0
POLE-222	ENST00000545015	CYP26B1	Q9NR63	512 aa		15.03	■□□□□ -0
POLE-222	ENST00000545015	WRAP73	Q9P2S5	460 aa	Predicted RBP	15.03	■□□□□ -0
POLE-222	ENST00000545015	PCDHA12	Q9UN75	941 aa		15.03	■□□□□ -0
POLE-222	ENST00000545015	GINS2	Q9Y248	185 aa		15.03	■□□□□ -0
POLE-222	ENST00000545015	COL4A4	P53420	1690 aa	Predicted RBP	15.03	■□□□□ -0
POLE-222	ENST00000545015	PRRC2B	Q5JSZ5	2229 aa	Known RBP	15.02	■□□□□ -0
POLE-222	ENST00000545015	TMEM150B	A6NC51	233 aa		15.02	■□□□□ -0
POLE-222	ENST00000545015	DLL1	O00548	723 aa		15.02	■□□□□ -0
POLE-222	ENST00000545015	MARCH6	O60337	910 aa		15.02	■□□□□ -0
POLE-222	ENST00000545015	NEMF	O60524	1076 aa		15.02	■□□□□ -0
POLE-222	ENST00000545015	BMPR1A	P36894	532 aa		15.02	■□□□□ -0
POLE-222	ENST00000545015	TRAPPC10	P48553	1259 aa		15.02	■□□□□ -0
POLE-222	ENST00000545015	CCDC85B	Q15834	202 aa	Predicted RBP	15.02	■□□□□ -0
POLE-222	ENST00000545015	ZNF410	Q86VK4	478 aa		15.02	■□□□□ -0
POLE-222	ENST00000545015	PPM1E	Q8WY54	764 aa		15.02	■□□□□ -0
POLE-222	ENST00000545015	MRPL38	Q96DV4	380 aa	Known RBP	15.02	■□□□□ -0
POLE-222	ENST00000545015	TBC1D32	Q96NH3	1257 aa		15.02	■□□□□ -0
POLE-222	ENST00000545015	ADAM2	Q99965	735 aa		15.02	■□□□□ -0
POLE-222	ENST00000545015	LXN	Q9BS40	222 aa		15.02	■□□□□ -0
POLE-222	ENST00000545015	PLVAP	Q9BX97	442 aa		15.02	■□□□□ -0
POLE-222	ENST00000545015	MTUS1	Q9ULD2	1270 aa		15.02	■□□□□ -0
POLE-222	ENST00000545015	COG5	Q9UP83	839 aa		15.02	■□□□□ -0
POLE-222	ENST00000545015	EVPL	Q92817	2033 aa		15.02	□□□□□ -0.01
POLE-222	ENST00000545015	GAS2	O43903	313 aa	Known RBP	15.01	□□□□□ -0.01
POLE-222	ENST00000545015	SLITRK3	O94933	977 aa		15.01	□□□□□ -0.01
POLE-222	ENST00000545015	U2AF2	P26368	475 aa	Known RBP eCLIP	15.01	□□□□□ -0.01	1e-11	■■■□□ 15.6
POLE-222	ENST00000545015	YWHAB	P31946	246 aa	Known RBP	15.01	□□□□□ -0.01
POLE-222	ENST00000545015	RFC5	P40937	340 aa		15.01	□□□□□ -0.01

Retrieved 100 of 20,778 RNA–protein pairs in 108.9 ms