RNA–Protein interactions for RNA: ENST00000543660.1

NPIPB4-219, Transcript of nuclear pore complex interacting protein family member B4, humanhuman

TSL 5

Gene NPIPB4, Length 353 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4-219ENST00000543660 KCNC3Q14003 757 aa5.67□□□□□ -1.5
NPIPB4-219ENST00000543660 COL9A2Q14055 689 aaPredicted RBP5.67□□□□□ -1.5
NPIPB4-219ENST00000543660 BTG3Q14201 252 aaPredicted RBP5.67□□□□□ -1.5
NPIPB4-219ENST00000543660 ANGPT1Q15389 498 aa5.67□□□□□ -1.5
NPIPB4-219ENST00000543660 ST3GAL2Q16842 350 aa5.67□□□□□ -1.5
NPIPB4-219ENST00000543660 CWF19L1Q69YN2 538 aaKnown RBP5.67□□□□□ -1.5
NPIPB4-219ENST00000543660 SDE2Q6IQ49 451 aa5.67□□□□□ -1.5
NPIPB4-219ENST00000543660 CEP85Q6P2H3 762 aa5.67□□□□□ -1.5
NPIPB4-219ENST00000543660 SYCE2Q6PIF2 218 aa5.67□□□□□ -1.5
NPIPB4-219ENST00000543660 KLHL23Q8NBE8 558 aa5.67□□□□□ -1.5
NPIPB4-219ENST00000543660 TSC1Q92574 1164 aa5.67□□□□□ -1.5
NPIPB4-219ENST00000543660 FRAT1Q92837 279 aaPredicted RBP5.67□□□□□ -1.5
NPIPB4-219ENST00000543660 APBB2Q92870 758 aa5.67□□□□□ -1.5
NPIPB4-219ENST00000543660 ATP6V0A1Q93050 837 aa5.67□□□□□ -1.5
NPIPB4-219ENST00000543660 OSBP2Q969R2 916 aa5.67□□□□□ -1.5
NPIPB4-219ENST00000543660 MPHOSPH6Q99547 160 aaKnown RBP5.67□□□□□ -1.5
NPIPB4-219ENST00000543660 HAUS7Q99871 368 aa5.67□□□□□ -1.5
NPIPB4-219ENST00000543660 C16orf70Q9BSU1 422 aa5.67□□□□□ -1.5
NPIPB4-219ENST00000543660 IL17RBQ9NRM6 502 aa5.67□□□□□ -1.5
NPIPB4-219ENST00000543660 MRPL42Q9Y6G3 142 aaKnown RBP5.67□□□□□ -1.5
NPIPB4-219ENST00000543660 C17orf102A2RUQ5 167 aa5.66□□□□□ -1.5
NPIPB4-219ENST00000543660 B4DLN1 442 aa5.66□□□□□ -1.5
NPIPB4-219ENST00000543660 NMT2O60551 498 aa5.66□□□□□ -1.5
NPIPB4-219ENST00000543660 ADH1CP00326 375 aa5.66□□□□□ -1.5
NPIPB4-219ENST00000543660 ABL1P00519 1130 aa5.66□□□□□ -1.5
NPIPB4-219ENST00000543660 IFIT2P09913 472 aaKnown RBP5.66□□□□□ -1.5
NPIPB4-219ENST00000543660 CCNYL3P0C7X3 344 aa5.66□□□□□ -1.5
NPIPB4-219ENST00000543660 NPR3P17342 541 aa5.66□□□□□ -1.5
NPIPB4-219ENST00000543660 AOC1P19801 751 aa5.66□□□□□ -1.5
NPIPB4-219ENST00000543660 VARSP26640 1264 aaKnown RBP5.66□□□□□ -1.5
NPIPB4-219ENST00000543660 MRPL12P52815 198 aaKnown RBP5.66□□□□□ -1.5
NPIPB4-219ENST00000543660 DUSP6Q16828 381 aa5.66□□□□□ -1.5
NPIPB4-219ENST00000543660 HSDL1Q3SXM5 330 aa5.66□□□□□ -1.5
NPIPB4-219ENST00000543660 FAM26DQ5JW98 314 aa5.66□□□□□ -1.5
NPIPB4-219ENST00000543660 SYDE2Q5VT97 1194 aa5.66□□□□□ -1.5
NPIPB4-219ENST00000543660 TMEM184AQ6ZMB5 413 aa5.66□□□□□ -1.5
NPIPB4-219ENST00000543660 CCDC105Q8IYK2 499 aa5.66□□□□□ -1.5
NPIPB4-219ENST00000543660 CLASRPQ8N2M8 674 aaKnown RBP5.66□□□□□ -1.5
NPIPB4-219ENST00000543660 KCNG4Q8TDN1 519 aa5.66□□□□□ -1.5
NPIPB4-219ENST00000543660 DCAF4Q8WV16 495 aa5.66□□□□□ -1.5
NPIPB4-219ENST00000543660 TBC1D5Q92609 795 aa5.66□□□□□ -1.5
NPIPB4-219ENST00000543660 KCNB2Q92953 911 aa5.66□□□□□ -1.5
NPIPB4-219ENST00000543660 NEK1Q96PY6 1258 aa5.66□□□□□ -1.5
NPIPB4-219ENST00000543660 SEMA4AQ9H3S1 761 aa5.66□□□□□ -1.5
NPIPB4-219ENST00000543660 RNPEPQ9H4A4 650 aa5.66□□□□□ -1.5
NPIPB4-219ENST00000543660 TLE6Q9H808 572 aa5.66□□□□□ -1.5
NPIPB4-219ENST00000543660 EHMT1Q9H9B1 1298 aa5.66□□□□□ -1.5
NPIPB4-219ENST00000543660 COL20A1Q9P218 1284 aa5.66□□□□□ -1.5
NPIPB4-219ENST00000543660 STX8Q9UNK0 236 aa5.66□□□□□ -1.5
NPIPB4-219ENST00000543660 UNC79Q9P2D8 2635 aa5.66□□□□□ -1.5
NPIPB4-219ENST00000543660 CEP295Q9C0D2 2601 aa5.65□□□□□ -1.5
NPIPB4-219ENST00000543660 C2CD4DB7Z1M9 353 aa5.65□□□□□ -1.5
NPIPB4-219ENST00000543660 ANP32CO43423 234 aa5.65□□□□□ -1.5
NPIPB4-219ENST00000543660 EIF3JO75822 258 aaKnown RBP5.65□□□□□ -1.5
NPIPB4-219ENST00000543660 CHRNA1P02708 482 aa5.65□□□□□ -1.5
NPIPB4-219ENST00000543660 ASGR2P07307 311 aa5.65□□□□□ -1.5
NPIPB4-219ENST00000543660 SMIM10L2AP0DMW4 78 aa5.65□□□□□ -1.5
NPIPB4-219ENST00000543660 SMIM10L2BP0DMW5 78 aa5.65□□□□□ -1.5
NPIPB4-219ENST00000543660 TIMP2P16035 220 aa5.65□□□□□ -1.5
NPIPB4-219ENST00000543660 TDO2P48775 406 aa5.65□□□□□ -1.5
NPIPB4-219ENST00000543660 ADAM17P78536 824 aa5.65□□□□□ -1.5
NPIPB4-219ENST00000543660 NNTQ13423 1086 aa5.65□□□□□ -1.5
NPIPB4-219ENST00000543660 STXBP2Q15833 593 aa5.65□□□□□ -1.5
NPIPB4-219ENST00000543660 RSPO4Q2I0M5 234 aaPredicted RBP5.65□□□□□ -1.5
NPIPB4-219ENST00000543660 CCDC96Q2M329 555 aa5.65□□□□□ -1.5
NPIPB4-219ENST00000543660 HSP90AB4PQ58FF6 505 aa5.65□□□□□ -1.5
NPIPB4-219ENST00000543660 ZSCAN25Q6NSZ9 544 aa5.65□□□□□ -1.5
NPIPB4-219ENST00000543660 ANKRD54Q6NXT1 300 aa5.65□□□□□ -1.5
NPIPB4-219ENST00000543660 ZNF662Q6ZS27 426 aa5.65□□□□□ -1.5
NPIPB4-219ENST00000543660 CMTR2Q8IYT2 770 aaKnown RBP5.65□□□□□ -1.5
NPIPB4-219ENST00000543660 IFNL3Q8IZI9 196 aa5.65□□□□□ -1.5
NPIPB4-219ENST00000543660 DCLK2Q8N568 766 aa5.65□□□□□ -1.5
NPIPB4-219ENST00000543660 DTWD2Q8NBA8 298 aa5.65□□□□□ -1.5
NPIPB4-219ENST00000543660 FLCNQ8NFG4 579 aa5.65□□□□□ -1.5
NPIPB4-219ENST00000543660 CYP2W1Q8TAV3 490 aa5.65□□□□□ -1.5
NPIPB4-219ENST00000543660 SYTL5Q8TDW5 730 aaPredicted RBP5.65□□□□□ -1.5
NPIPB4-219ENST00000543660 NSUN6Q8TEA1 469 aaKnown RBP5.65□□□□□ -1.5
NPIPB4-219ENST00000543660 KIF1BPQ96EK5 621 aa5.65□□□□□ -1.5
NPIPB4-219ENST00000543660 CCDC136Q96JN2 1154 aa5.65□□□□□ -1.5
NPIPB4-219ENST00000543660 TAAR1Q96RJ0 339 aa5.65□□□□□ -1.5
NPIPB4-219ENST00000543660 IWS1Q96ST2 819 aa5.65□□□□□ -1.5
NPIPB4-219ENST00000543660 CDCA3Q99618 268 aaPredicted RBP5.65□□□□□ -1.5
NPIPB4-219ENST00000543660 BACH2Q9BYV9 841 aa5.65□□□□□ -1.5
NPIPB4-219ENST00000543660 BRINP2Q9C0B6 783 aa5.65□□□□□ -1.5
NPIPB4-219ENST00000543660 TGIF2Q9GZN2 237 aa5.65□□□□□ -1.5
NPIPB4-219ENST00000543660 MFSD1Q9H3U5 465 aa5.65□□□□□ -1.5
NPIPB4-219ENST00000543660 METTL5Q9NRN9 209 aaKnown RBP5.65□□□□□ -1.5
NPIPB4-219ENST00000543660 CDH22Q9UJ99 828 aa5.65□□□□□ -1.5
NPIPB4-219ENST00000543660 RALYQ9UKM9 306 aaKnown RBP5.65□□□□□ -1.5
NPIPB4-219ENST00000543660 DDX52Q9Y2R4 599 aaKnown RBP eCLIP5.65□□□□□ -1.5
NPIPB4-219ENST00000543660 NR2E1Q9Y466 385 aa5.65□□□□□ -1.5
NPIPB4-219ENST00000543660 WDR19Q8NEZ3 1342 aa5.65□□□□□ -1.51
NPIPB4-219ENST00000543660 SETXQ7Z333 2677 aaKnown RBP5.65□□□□□ -1.51
NPIPB4-219ENST00000543660 KIAA1217Q5T5P2 1943 aa5.64□□□□□ -1.51
NPIPB4-219ENST00000543660 CNOT1A5YKK6 2376 aaKnown RBP5.64□□□□□ -1.51
NPIPB4-219ENST00000543660 FSD2A1L4K1 749 aa5.64□□□□□ -1.51
NPIPB4-219ENST00000543660 FSCN2O14926 492 aa5.64□□□□□ -1.51
NPIPB4-219ENST00000543660 ZZEF1O43149 2961 aa5.64□□□□□ -1.51
NPIPB4-219ENST00000543660 GPAA1O43292 621 aa5.64□□□□□ -1.51
NPIPB4-219ENST00000543660 PPFIA3O75145 1194 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms