RNA–Protein interactions for RNA: ENST00000543233.2

CDH4-201, Transcript of cadherin 4, humanhuman

TSL 2 BASIC

Gene CDH4, Length 3,117 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4-201ENST00000543233 GRM4Q14833 912 aa12.22□□□□□ -0.45
CDH4-201ENST00000543233 NR1I3Q14994 352 aa12.22□□□□□ -0.45
CDH4-201ENST00000543233 SOGA3Q5TF21 947 aa12.22□□□□□ -0.45
CDH4-201ENST00000543233 SEC63Q9UGP8 760 aaKnown RBP12.22□□□□□ -0.45
CDH4-201ENST00000543233 ZMYND8Q9ULU4 1186 aaPredicted RBP12.22□□□□□ -0.45
CDH4-201ENST00000543233 TMCO1Q9UM00 188 aa12.22□□□□□ -0.45
CDH4-201ENST00000543233 EPN1Q9Y6I3 576 aaPredicted RBP12.22□□□□□ -0.45
CDH4-201ENST00000543233 PALM3A6NDB9 673 aaPredicted RBP12.22□□□□□ -0.45
CDH4-201ENST00000543233 PSMD14O00487 310 aa12.22□□□□□ -0.45
CDH4-201ENST00000543233 KRT16P08779 473 aa12.22□□□□□ -0.45
CDH4-201ENST00000543233 ZFXP17010 805 aaPredicted RBP12.22□□□□□ -0.45
CDH4-201ENST00000543233 RXRBP28702 533 aa12.22□□□□□ -0.45
CDH4-201ENST00000543233 LBRQ14739 615 aaKnown RBP12.22□□□□□ -0.45
CDH4-201ENST00000543233 DPP8Q6V1X1 898 aaPredicted RBP12.22□□□□□ -0.45
CDH4-201ENST00000543233 NCCRP1Q6ZVX7 275 aaPredicted RBP12.22□□□□□ -0.45
CDH4-201ENST00000543233 TRIM50Q86XT4 487 aa12.22□□□□□ -0.45
CDH4-201ENST00000543233 RNF10Q8N5U6 811 aaKnown RBP12.22□□□□□ -0.45
CDH4-201ENST00000543233 SMC1BQ8NDV3 1235 aa12.22□□□□□ -0.45
CDH4-201ENST00000543233 CHP1Q99653 195 aa12.22□□□□□ -0.45
CDH4-201ENST00000543233 EPB41L5Q9HCM4 733 aa12.22□□□□□ -0.45
CDH4-201ENST00000543233 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.22□□□□□ -0.45
CDH4-201ENST00000543233 NOVA2Q9UNW9 492 aaKnown RBP12.22□□□□□ -0.45
CDH4-201ENST00000543233 RPN1P04843 607 aaKnown RBP12.21□□□□□ -0.45
CDH4-201ENST00000543233 GYPCP04921 128 aa12.21□□□□□ -0.45
CDH4-201ENST00000543233 TXKP42681 527 aa12.21□□□□□ -0.45
CDH4-201ENST00000543233 PSMC4P43686 418 aa12.21□□□□□ -0.45
CDH4-201ENST00000543233 MCL1Q07820 350 aa12.21□□□□□ -0.45
CDH4-201ENST00000543233 TSR1Q2NL82 804 aaKnown RBP12.21□□□□□ -0.45
CDH4-201ENST00000543233 PABPC1LQ4VXU2 614 aaKnown RBP12.21□□□□□ -0.45
CDH4-201ENST00000543233 ZBTB8BQ8NAP8 495 aaPredicted RBP12.21□□□□□ -0.45
CDH4-201ENST00000543233 SMCR8Q8TEV9 937 aaPredicted RBP12.21□□□□□ -0.45
CDH4-201ENST00000543233 UCMAQ8WVF2 138 aa12.21□□□□□ -0.45
CDH4-201ENST00000543233 GSDMAQ96QA5 445 aa12.21□□□□□ -0.45
CDH4-201ENST00000543233 NR1H4Q96RI1 486 aaPredicted RBP12.21□□□□□ -0.45
CDH4-201ENST00000543233 HAUS4Q9H6D7 363 aa12.21□□□□□ -0.45
CDH4-201ENST00000543233 ADAM22Q9P0K1 906 aa12.21□□□□□ -0.45
CDH4-201ENST00000543233 NUB1Q9Y5A7 615 aa12.21□□□□□ -0.45
CDH4-201ENST00000543233 IRS2Q9Y4H2 1338 aa12.21□□□□□ -0.45
CDH4-201ENST00000543233 KRT86O43790 486 aa12.21□□□□□ -0.46
CDH4-201ENST00000543233 UBOX5O94941 541 aa12.21□□□□□ -0.46
CDH4-201ENST00000543233 ERCC5P28715 1186 aaPredicted RBP12.21□□□□□ -0.46
CDH4-201ENST00000543233 MLH1P40692 756 aa12.21□□□□□ -0.46
CDH4-201ENST00000543233 PRCPP42785 496 aa12.21□□□□□ -0.46
CDH4-201ENST00000543233 MSH2P43246 934 aa12.21□□□□□ -0.46
CDH4-201ENST00000543233 PABPC4Q13310 644 aaKnown RBP eCLIP12.21□□□□□ -0.46
CDH4-201ENST00000543233 RUFY4Q6ZNE9 571 aa12.21□□□□□ -0.46
CDH4-201ENST00000543233 APLFQ8IW19 511 aaPredicted RBP12.21□□□□□ -0.46
CDH4-201ENST00000543233 HIC2Q96JB3 615 aa12.21□□□□□ -0.46
CDH4-201ENST00000543233 SELENOSQ9BQE4 189 aa12.21□□□□□ -0.46
CDH4-201ENST00000543233 KCNQ5Q9NR82 932 aa12.21□□□□□ -0.46
CDH4-201ENST00000543233 ABCF3Q9NUQ8 709 aa12.21□□□□□ -0.46
CDH4-201ENST00000543233 ZNF180Q9UJW8 692 aa12.21□□□□□ -0.46
CDH4-201ENST00000543233 BARX2Q9UMQ3 279 aaPredicted RBP12.21□□□□□ -0.46
CDH4-201ENST00000543233 PCDHAC2Q9Y5I4 1007 aa12.21□□□□□ -0.46
CDH4-201ENST00000543233 WNK3Q9BYP7 1800 aa12.21□□□□□ -0.46
CDH4-201ENST00000543233 NDUFA10O95299 355 aa12.2□□□□□ -0.46
CDH4-201ENST00000543233 AKR1B1P15121 316 aa12.2□□□□□ -0.46
CDH4-201ENST00000543233 KCNA3P22001 575 aa12.2□□□□□ -0.46
CDH4-201ENST00000543233 ATP2B4P23634 1241 aa12.2□□□□□ -0.46
CDH4-201ENST00000543233 CCNFP41002 786 aa12.2□□□□□ -0.46
CDH4-201ENST00000543233 PAK1Q13153 545 aa12.2□□□□□ -0.46
CDH4-201ENST00000543233 KRT31Q15323 416 aa12.2□□□□□ -0.46
CDH4-201ENST00000543233 PDXDC2PQ6P474 469 aa12.2□□□□□ -0.46
CDH4-201ENST00000543233 TRPM8Q7Z2W7 1104 aa12.2□□□□□ -0.46
CDH4-201ENST00000543233 SH3RF1Q7Z6J0 888 aa12.2□□□□□ -0.46
CDH4-201ENST00000543233 CCNJLQ8IV13 435 aa12.2□□□□□ -0.46
CDH4-201ENST00000543233 IFT20Q8IY31 132 aa12.2□□□□□ -0.46
CDH4-201ENST00000543233 SPATA4Q8NEY3 305 aa12.2□□□□□ -0.46
CDH4-201ENST00000543233 MDM1Q8TC05 714 aa12.2□□□□□ -0.46
CDH4-201ENST00000543233 CHMP6Q96FZ7 201 aa12.2□□□□□ -0.46
CDH4-201ENST00000543233 DDX23Q9BUQ8 820 aaKnown RBP12.2□□□□□ -0.46
CDH4-201ENST00000543233 ZC3H12CQ9C0D7 883 aaKnown RBP12.2□□□□□ -0.46
CDH4-201ENST00000543233 DBNDD1Q9H9R9 158 aa12.2□□□□□ -0.46
CDH4-201ENST00000543233 ABHD10Q9NUJ1 306 aa12.2□□□□□ -0.46
CDH4-201ENST00000543233 DAGLAQ9Y4D2 1042 aa12.2□□□□□ -0.46
CDH4-201ENST00000543233 GSTA1P08263 222 aa12.2□□□□□ -0.46
CDH4-201ENST00000543233 PAFAH1B1P43034 410 aa12.2□□□□□ -0.46
CDH4-201ENST00000543233 PMS1P54277 932 aaKnown RBP12.2□□□□□ -0.46
CDH4-201ENST00000543233 PPP2R2AP63151 447 aa12.2□□□□□ -0.46
CDH4-201ENST00000543233 RCN2Q14257 317 aa12.2□□□□□ -0.46
CDH4-201ENST00000543233 SHROOM1Q2M3G4 852 aaPredicted RBP12.2□□□□□ -0.46
CDH4-201ENST00000543233 DPY19L2Q6NUT2 758 aa12.2□□□□□ -0.46
CDH4-201ENST00000543233 C14orf80Q86SX3 495 aa12.2□□□□□ -0.46
CDH4-201ENST00000543233 CCDC65Q8IXS2 484 aa12.2□□□□□ -0.46
CDH4-201ENST00000543233 SPATA20Q8TB22 786 aa12.2□□□□□ -0.46
CDH4-201ENST00000543233 RMDN2Q96LZ7 410 aa12.2□□□□□ -0.46
CDH4-201ENST00000543233 TCHPQ9BT92 498 aa12.2□□□□□ -0.46
CDH4-201ENST00000543233 BARHL2Q9NY43 387 aa12.2□□□□□ -0.46
CDH4-201ENST00000543233 SLC12A4Q9UP95 1085 aa12.2□□□□□ -0.46
CDH4-201ENST00000543233 MYH8P13535 1937 aa12.2□□□□□ -0.46
CDH4-201ENST00000543233 TRIM43BA6NCK2 446 aa12.2□□□□□ -0.46
CDH4-201ENST00000543233 KRT38O76015 456 aa12.2□□□□□ -0.46
CDH4-201ENST00000543233 HEXIM1O94992 359 aaKnown RBP12.2□□□□□ -0.46
CDH4-201ENST00000543233 TNNI2P48788 182 aa12.2□□□□□ -0.46
CDH4-201ENST00000543233 RHBDL3P58872 404 aa12.2□□□□□ -0.46
CDH4-201ENST00000543233 TXNRD1Q16881 649 aa12.2□□□□□ -0.46
CDH4-201ENST00000543233 SLC44A4Q53GD3 710 aa12.2□□□□□ -0.46
CDH4-201ENST00000543233 PAPD7Q5XG87 772 aaKnown RBP12.2□□□□□ -0.46
CDH4-201ENST00000543233 CACNA2D4Q7Z3S7 1137 aa12.2□□□□□ -0.46
CDH4-201ENST00000543233 ZSCAN29Q8IWY8 852 aaPredicted RBP12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms