RNA–Protein interactions for RNA: ENST00000543184.5

PRAME-214, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PRAME, Length 2,758 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-214ENST00000543184 SEC16BQ96JE7 1060 aa15.49■□□□□ 0.07
PRAME-214ENST00000543184 DDX4Q9NQI0 724 aaKnown RBP15.49■□□□□ 0.07
PRAME-214ENST00000543184 DDX25Q9UHL0 483 aaKnown RBP15.49■□□□□ 0.07
PRAME-214ENST00000543184 SLC12A6Q9UHW9 1150 aa15.49■□□□□ 0.07
PRAME-214ENST00000543184 FZD1Q9UP38 647 aa15.49■□□□□ 0.07
PRAME-214ENST00000543184 MYH7BA7E2Y1 1941 aa15.49■□□□□ 0.07
PRAME-214ENST00000543184 POTEFA5A3E0 1075 aa15.48■□□□□ 0.07
PRAME-214ENST00000543184 SFI1A8K8P3 1242 aa15.48■□□□□ 0.07
PRAME-214ENST00000543184 USP17L15C9J2P7 530 aa15.48■□□□□ 0.07
PRAME-214ENST00000543184 USP17L13C9JLJ4 530 aa15.48■□□□□ 0.07
PRAME-214ENST00000543184 USP17L11C9JVI0 530 aa15.48■□□□□ 0.07
PRAME-214ENST00000543184 USP17L18D6R9N7 530 aa15.48■□□□□ 0.07
PRAME-214ENST00000543184 USP17L22D6RA61 530 aa15.48■□□□□ 0.07
PRAME-214ENST00000543184 USP17L17D6RBQ6 530 aa15.48■□□□□ 0.07
PRAME-214ENST00000543184 USP17L19D6RCP7 530 aa15.48■□□□□ 0.07
PRAME-214ENST00000543184 USP17L20D6RJB6 530 aa15.48■□□□□ 0.07
PRAME-214ENST00000543184 POTEIP0CG38 1075 aa15.48■□□□□ 0.07
PRAME-214ENST00000543184 ABCB4P21439 1286 aa15.48■□□□□ 0.07
PRAME-214ENST00000543184 NR2F2P24468 414 aa15.48■□□□□ 0.07
PRAME-214ENST00000543184 CASP4P49662 377 aa15.48■□□□□ 0.07
PRAME-214ENST00000543184 USP17L24Q0WX57 530 aa15.48■□□□□ 0.07
PRAME-214ENST00000543184 APOBEC3HQ6NTF7 200 aaKnown RBP15.48■□□□□ 0.07
PRAME-214ENST00000543184 ALKBH5Q6P6C2 394 aaKnown RBP15.48■□□□□ 0.07
PRAME-214ENST00000543184 USP17L6PQ6QN14 398 aa15.48■□□□□ 0.07
PRAME-214ENST00000543184 POTEGQ6S5H5 508 aa15.48■□□□□ 0.07
PRAME-214ENST00000543184 POTEEQ6S8J3 1075 aa15.48■□□□□ 0.07
PRAME-214ENST00000543184 CD302Q8IX05 232 aa15.48■□□□□ 0.07
PRAME-214ENST00000543184 PLCB1Q9NQ66 1216 aa15.48■□□□□ 0.07
PRAME-214ENST00000543184 EMILIN3Q9NT22 766 aa15.48■□□□□ 0.07
PRAME-214ENST00000543184 TMEM59LQ9UK28 342 aa15.48■□□□□ 0.07
PRAME-214ENST00000543184 PNMA2Q9UL42 364 aa15.48■□□□□ 0.07
PRAME-214ENST00000543184 ADAMTSL1Q8N6G6 1762 aa15.48■□□□□ 0.07
PRAME-214ENST00000543184 MYBP10242 640 aa15.48■□□□□ 0.07
PRAME-214ENST00000543184 FXR2P51116 673 aaKnown RBP eCLIP15.48■□□□□ 0.074e-8■□□□□ 9.7
PRAME-214ENST00000543184 SNAP25P60880 206 aa15.48■□□□□ 0.07
PRAME-214ENST00000543184 DAAM2Q86T65 1068 aa15.48■□□□□ 0.07
PRAME-214ENST00000543184 SCFD2Q8WU76 684 aa15.48■□□□□ 0.07
PRAME-214ENST00000543184 HDAC9Q9UKV0 1011 aa15.48■□□□□ 0.07
PRAME-214ENST00000543184 VIL1P09327 827 aaKnown RBP15.47■□□□□ 0.07
PRAME-214ENST00000543184 USP8P40818 1118 aa15.47■□□□□ 0.07
PRAME-214ENST00000543184 COBLL1Q53SF7 1204 aa15.47■□□□□ 0.07
PRAME-214ENST00000543184 PEX26Q7Z412 305 aa15.47■□□□□ 0.07
PRAME-214ENST00000543184 U2AF1L4Q8WU68 220 aaKnown RBP15.47■□□□□ 0.07
PRAME-214ENST00000543184 GLG1Q92896 1179 aa15.47■□□□□ 0.07
PRAME-214ENST00000543184 RIC8AQ9NPQ8 531 aa15.47■□□□□ 0.07
PRAME-214ENST00000543184 NAGPAQ9UK23 515 aa15.47■□□□□ 0.07
PRAME-214ENST00000543184 PCDHA12Q9UN75 941 aa15.47■□□□□ 0.07
PRAME-214ENST00000543184 RASSF9O75901 435 aa15.47■□□□□ 0.07
PRAME-214ENST00000543184 PLA2G4BP0C869 781 aa15.47■□□□□ 0.07
PRAME-214ENST00000543184 SCP2P22307 547 aa15.47■□□□□ 0.07
PRAME-214ENST00000543184 USP11P51784 963 aa15.47■□□□□ 0.07
PRAME-214ENST00000543184 TMEM119Q4V9L6 283 aa15.47■□□□□ 0.07
PRAME-214ENST00000543184 CDC42EP5Q6NZY7 148 aa15.47■□□□□ 0.07
PRAME-214ENST00000543184 KCTD1Q719H9 257 aa15.47■□□□□ 0.07
PRAME-214ENST00000543184 TEX2Q8IWB9 1127 aa15.47■□□□□ 0.07
PRAME-214ENST00000543184 TBC1D31Q96DN5 1066 aa15.47■□□□□ 0.07
PRAME-214ENST00000543184 CNOT7Q9UIV1 285 aaKnown RBP15.47■□□□□ 0.07
PRAME-214ENST00000543184 RSPH10B2B2RC85 870 aa15.47■□□□□ 0.07
PRAME-214ENST00000543184 TRAPPC3O43617 180 aa15.47■□□□□ 0.07
PRAME-214ENST00000543184 CAND2O75155 1236 aa15.47■□□□□ 0.07
PRAME-214ENST00000543184 GFPT2O94808 682 aa15.47■□□□□ 0.07
PRAME-214ENST00000543184 RPSAP08865 295 aaKnown RBP15.47■□□□□ 0.07
PRAME-214ENST00000543184 RSPH10BP0C881 870 aa15.47■□□□□ 0.07
PRAME-214ENST00000543184 UCHL3P15374 230 aa15.47■□□□□ 0.07
PRAME-214ENST00000543184 PPP2R2AP63151 447 aa15.47■□□□□ 0.07
PRAME-214ENST00000543184 CPLX4Q7Z7G2 160 aa15.47■□□□□ 0.07
PRAME-214ENST00000543184 KSR1Q8IVT5 923 aa15.47■□□□□ 0.07
PRAME-214ENST00000543184 IQCDQ96DY2 449 aa15.47■□□□□ 0.07
PRAME-214ENST00000543184 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.47■□□□□ 0.073e-8■■■■■ 50.7
PRAME-214ENST00000543184 RNF14Q9UBS8 474 aa15.47■□□□□ 0.07
PRAME-214ENST00000543184 FZD9O00144 591 aa15.46■□□□□ 0.07
PRAME-214ENST00000543184 RDXP35241 583 aaKnown RBP15.46■□□□□ 0.07
PRAME-214ENST00000543184 RHBDL3P58872 404 aa15.46■□□□□ 0.07
PRAME-214ENST00000543184 PABPC4Q13310 644 aaKnown RBP eCLIP15.46■□□□□ 0.074e-75■□□□□ 10.5
PRAME-214ENST00000543184 LRRC57Q8N9N7 239 aa15.46■□□□□ 0.07
PRAME-214ENST00000543184 TPCN2Q8NHX9 752 aa15.46■□□□□ 0.07
PRAME-214ENST00000543184 TRPM4Q8TD43 1214 aa15.46■□□□□ 0.07
PRAME-214ENST00000543184 SELENOSQ9BQE4 189 aa15.46■□□□□ 0.07
PRAME-214ENST00000543184 KCTD10Q9H3F6 313 aa15.46■□□□□ 0.07
PRAME-214ENST00000543184 LUC7LQ9NQ29 371 aaKnown RBP15.46■□□□□ 0.07
PRAME-214ENST00000543184 PCDHA2Q9Y5H9 948 aa15.46■□□□□ 0.07
PRAME-214ENST00000543184 PGRMC1O00264 195 aaKnown RBP15.46■□□□□ 0.06
PRAME-214ENST00000543184 HGSO14964 777 aaPredicted RBP15.46■□□□□ 0.06
PRAME-214ENST00000543184 MED24O75448 989 aa15.46■□□□□ 0.06
PRAME-214ENST00000543184 FGGP02679 453 aa15.46■□□□□ 0.06
PRAME-214ENST00000543184 SLCO1A2P46721 670 aa15.46■□□□□ 0.06
PRAME-214ENST00000543184 IFFO1Q0D2I5 559 aa15.46■□□□□ 0.06
PRAME-214ENST00000543184 ANKRD20A8PQ5CZ79 823 aa15.46■□□□□ 0.06
PRAME-214ENST00000543184 ARSHQ5FYA8 562 aa15.46■□□□□ 0.06
PRAME-214ENST00000543184 CYB5D1Q6P9G0 228 aa15.46■□□□□ 0.06
PRAME-214ENST00000543184 ERVK-5Q9HDB9 667 aa15.46■□□□□ 0.06
PRAME-214ENST00000543184 AIPL1Q9NZN9 384 aa15.46■□□□□ 0.06
PRAME-214ENST00000543184 TPX2Q9ULW0 747 aaKnown RBP15.46■□□□□ 0.06
PRAME-214ENST00000543184 PCDHB13Q9Y5F0 798 aa15.46■□□□□ 0.06
PRAME-214ENST00000543184 BAG3O95817 575 aa15.45■□□□□ 0.06
PRAME-214ENST00000543184 PON1P27169 355 aa15.45■□□□□ 0.06
PRAME-214ENST00000543184 SMTNP53814 917 aa15.45■□□□□ 0.06
PRAME-214ENST00000543184 DLGAP5Q15398 846 aa15.45■□□□□ 0.06
PRAME-214ENST00000543184 SHROOM1Q2M3G4 852 aaPredicted RBP15.45■□□□□ 0.06
PRAME-214ENST00000543184 PPP4R3AQ6IN85 833 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms