RNA–Protein interactions for RNA: ENST00000542866.2

KDM3B-209, Transcript of lysine demethylase 3B, humanhuman

TSL 2 BASIC

Gene KDM3B, Length 3,634 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-209ENST00000542866 TOGARAM1Q9Y4F4 1720 aa5.77□□□□□ -1.49
KDM3B-209ENST00000542866 C5orf60A6NFR6 353 aa5.77□□□□□ -1.49
KDM3B-209ENST00000542866 SPDYE3A6NKU9 549 aa5.77□□□□□ -1.49
KDM3B-209ENST00000542866 M0R2N6 131 aa5.77□□□□□ -1.49
KDM3B-209ENST00000542866 SHBGP04278 402 aa5.77□□□□□ -1.49
KDM3B-209ENST00000542866 MYBP10242 640 aa5.77□□□□□ -1.49
KDM3B-209ENST00000542866 PLTPP55058 493 aa5.77□□□□□ -1.49
KDM3B-209ENST00000542866 MECOMQ03112 1051 aa5.77□□□□□ -1.49
KDM3B-209ENST00000542866 TTLL12Q14166 644 aaPredicted RBP5.77□□□□□ -1.49
KDM3B-209ENST00000542866 TCERG1LQ5VWI1 586 aa5.77□□□□□ -1.49
KDM3B-209ENST00000542866 ALKBH5Q6P6C2 394 aaKnown RBP5.77□□□□□ -1.49
KDM3B-209ENST00000542866 MGARPQ8TDB4 240 aa5.77□□□□□ -1.49
KDM3B-209ENST00000542866 DYDC1Q8WWB3 177 aa5.77□□□□□ -1.49
KDM3B-209ENST00000542866 FMO2Q99518 471 aa5.77□□□□□ -1.49
KDM3B-209ENST00000542866 PRMT1Q99873 361 aaKnown RBP5.77□□□□□ -1.49
KDM3B-209ENST00000542866 CNOT10Q9H9A5 744 aaKnown RBP5.77□□□□□ -1.49
KDM3B-209ENST00000542866 RIC8AQ9NPQ8 531 aa5.77□□□□□ -1.49
KDM3B-209ENST00000542866 IL17RBQ9NRM6 502 aa5.77□□□□□ -1.49
KDM3B-209ENST00000542866 INTS9Q9NV88 658 aaKnown RBP5.77□□□□□ -1.49
KDM3B-209ENST00000542866 POLLQ9UGP5 575 aa5.77□□□□□ -1.49
KDM3B-209ENST00000542866 MAD2L2Q9UI95 211 aa5.77□□□□□ -1.49
KDM3B-209ENST00000542866 TMEM59LQ9UK28 342 aa5.77□□□□□ -1.49
KDM3B-209ENST00000542866 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.77□□□□□ -1.49
KDM3B-209ENST00000542866 ITGB4P16144 1822 aa5.77□□□□□ -1.49
KDM3B-209ENST00000542866 RGS16O15492 202 aaPredicted RBP5.76□□□□□ -1.49
KDM3B-209ENST00000542866 DIAPH2O60879 1101 aa5.76□□□□□ -1.49
KDM3B-209ENST00000542866 FGGP02679 453 aa5.76□□□□□ -1.49
KDM3B-209ENST00000542866 KRT18P05783 430 aaKnown RBP5.76□□□□□ -1.49
KDM3B-209ENST00000542866 FGRP09769 529 aa5.76□□□□□ -1.49
KDM3B-209ENST00000542866 GHRP10912 638 aa5.76□□□□□ -1.49
KDM3B-209ENST00000542866 SLC9A1P19634 815 aa5.76□□□□□ -1.49
KDM3B-209ENST00000542866 GNA11P29992 359 aa5.76□□□□□ -1.49
KDM3B-209ENST00000542866 TNNI2P48788 182 aa5.76□□□□□ -1.49
KDM3B-209ENST00000542866 ZKSCAN8Q15776 578 aaPredicted RBP5.76□□□□□ -1.49
KDM3B-209ENST00000542866 SLC35G1Q2M3R5 365 aa5.76□□□□□ -1.49
KDM3B-209ENST00000542866 FAM26FQ5R3K3 315 aa5.76□□□□□ -1.49
KDM3B-209ENST00000542866 ERMARDQ5T6L9 678 aa5.76□□□□□ -1.49
KDM3B-209ENST00000542866 GALNT17Q6IS24 598 aa5.76□□□□□ -1.49
KDM3B-209ENST00000542866 TLDC1Q6P9B6 456 aa5.76□□□□□ -1.49
KDM3B-209ENST00000542866 ZNF571Q7Z3V5 609 aaPredicted RBP5.76□□□□□ -1.49
KDM3B-209ENST00000542866 KCNK18Q7Z418 384 aa5.76□□□□□ -1.49
KDM3B-209ENST00000542866 HOOK3Q86VS8 718 aa5.76□□□□□ -1.49
KDM3B-209ENST00000542866 NME8Q8N427 588 aa5.76□□□□□ -1.49
KDM3B-209ENST00000542866 MAGEC3Q8TD91 643 aa5.76□□□□□ -1.49
KDM3B-209ENST00000542866 ACTRT1Q8TDG2 376 aa5.76□□□□□ -1.49
KDM3B-209ENST00000542866 ZNF384Q8TF68 577 aa5.76□□□□□ -1.49
KDM3B-209ENST00000542866 P3H4Q92791 437 aa5.76□□□□□ -1.49
KDM3B-209ENST00000542866 GJA10Q969M2 543 aa5.76□□□□□ -1.49
KDM3B-209ENST00000542866 PNMA5Q96PV4 448 aa5.76□□□□□ -1.49
KDM3B-209ENST00000542866 FAM129AQ9BZQ8 928 aa5.76□□□□□ -1.49
KDM3B-209ENST00000542866 AZI2Q9H6S1 392 aa5.76□□□□□ -1.49
KDM3B-209ENST00000542866 FAM114A2Q9NRY5 505 aa5.76□□□□□ -1.49
KDM3B-209ENST00000542866 BMP2KQ9NSY1 1161 aaPredicted RBP5.76□□□□□ -1.49
KDM3B-209ENST00000542866 PANK4Q9NVE7 773 aa5.76□□□□□ -1.49
KDM3B-209ENST00000542866 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP5.76□□□□□ -1.492e-9■■□□□ 14.1
KDM3B-209ENST00000542866 SEC63Q9UGP8 760 aaKnown RBP5.76□□□□□ -1.49
KDM3B-209ENST00000542866 SRCAPQ6ZRS2 3230 aa5.76□□□□□ -1.49
KDM3B-209ENST00000542866 TIAM2Q8IVF5 1701 aa5.76□□□□□ -1.49
KDM3B-209ENST00000542866 CCDC188H7C350 402 aa5.76□□□□□ -1.49
KDM3B-209ENST00000542866 CALRP27797 417 aaKnown RBP5.76□□□□□ -1.49
KDM3B-209ENST00000542866 PRDX5P30044 214 aa5.76□□□□□ -1.49
KDM3B-209ENST00000542866 CCNHP51946 323 aaPredicted RBP5.76□□□□□ -1.49
KDM3B-209ENST00000542866 KCNH2Q12809 1159 aa5.76□□□□□ -1.49
KDM3B-209ENST00000542866 COASYQ13057 564 aa5.76□□□□□ -1.49
KDM3B-209ENST00000542866 ADAM9Q13443 819 aa5.76□□□□□ -1.49
KDM3B-209ENST00000542866 GRM4Q14833 912 aa5.76□□□□□ -1.49
KDM3B-209ENST00000542866 CCDC38Q502W7 563 aa5.76□□□□□ -1.49
KDM3B-209ENST00000542866 HERC4Q5GLZ8 1057 aaPredicted RBP5.76□□□□□ -1.49
KDM3B-209ENST00000542866 SLC44A5Q8NCS7 719 aa5.76□□□□□ -1.49
KDM3B-209ENST00000542866 AGAP11Q8TF27 550 aa5.76□□□□□ -1.49
KDM3B-209ENST00000542866 U2AF1L4Q8WU68 220 aaKnown RBP5.76□□□□□ -1.49
KDM3B-209ENST00000542866 LMBR1Q8WVP7 490 aa5.76□□□□□ -1.49
KDM3B-209ENST00000542866 RAD54LQ92698 747 aa5.76□□□□□ -1.49
KDM3B-209ENST00000542866 SYN2Q92777 582 aaPredicted RBP5.76□□□□□ -1.49
KDM3B-209ENST00000542866 UBA5Q9GZZ9 404 aa5.76□□□□□ -1.49
KDM3B-209ENST00000542866 SNX24Q9Y343 169 aa5.76□□□□□ -1.49
KDM3B-209ENST00000542866 MYO3BQ8WXR4 1341 aa5.76□□□□□ -1.49
KDM3B-209ENST00000542866 MPHOSPH10O00566 681 aaKnown RBP5.76□□□□□ -1.49
KDM3B-209ENST00000542866 TDP2O95551 362 aa5.76□□□□□ -1.49
KDM3B-209ENST00000542866 KRT13P13646 458 aa5.76□□□□□ -1.49
KDM3B-209ENST00000542866 LMNB1P20700 586 aa5.76□□□□□ -1.49
KDM3B-209ENST00000542866 KLRK1P26718 216 aa5.76□□□□□ -1.49
KDM3B-209ENST00000542866 SSR1P43307 286 aaKnown RBP5.76□□□□□ -1.49
KDM3B-209ENST00000542866 KCNJ2P63252 427 aa5.76□□□□□ -1.49
KDM3B-209ENST00000542866 IFI35P80217 286 aaPredicted RBP5.76□□□□□ -1.49
KDM3B-209ENST00000542866 SARNPP82979 210 aaKnown RBP5.76□□□□□ -1.49
KDM3B-209ENST00000542866 LRRC14Q15048 493 aa5.76□□□□□ -1.49
KDM3B-209ENST00000542866 DIXDC1Q155Q3 683 aa5.76□□□□□ -1.49
KDM3B-209ENST00000542866 DCAF17Q5H9S7 520 aaPredicted RBP5.76□□□□□ -1.49
KDM3B-209ENST00000542866 DENND2CQ68D51 928 aa5.76□□□□□ -1.49
KDM3B-209ENST00000542866 USP17L2Q6R6M4 530 aa5.76□□□□□ -1.49
KDM3B-209ENST00000542866 TRPM8Q7Z2W7 1104 aa5.76□□□□□ -1.49
KDM3B-209ENST00000542866 FBXO33Q7Z6M2 555 aa5.76□□□□□ -1.49
KDM3B-209ENST00000542866 DGKHQ86XP1 1220 aa5.76□□□□□ -1.49
KDM3B-209ENST00000542866 KIF2BQ8N4N8 673 aa5.76□□□□□ -1.49
KDM3B-209ENST00000542866 PRCCQ92733 491 aaPredicted RBP5.76□□□□□ -1.49
KDM3B-209ENST00000542866 NSUN4Q96CB9 384 aaKnown RBP5.76□□□□□ -1.49
KDM3B-209ENST00000542866 HOOK2Q96ED9 719 aa5.76□□□□□ -1.49
KDM3B-209ENST00000542866 FGFBP2Q9BYJ0 223 aa5.76□□□□□ -1.49
KDM3B-209ENST00000542866 RAB34Q9BZG1 259 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms