RNA–Protein interactions for RNA: ENST00000542786.1

LDB3-207, Transcript of LIM domain binding 3, humanhuman

TSL 2 BASIC

Gene LDB3, Length 1,889 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-207ENST00000542786 TFRCP02786 760 aaKnown RBP15.54■□□□□ 0.08
LDB3-207ENST00000542786 ACTN1P12814 892 aa15.54■□□□□ 0.08
LDB3-207ENST00000542786 XRCC5P13010 732 aaKnown RBP15.54■□□□□ 0.08
LDB3-207ENST00000542786 SLC9A1P19634 815 aa15.54■□□□□ 0.08
LDB3-207ENST00000542786 SFMBT2Q5VUG0 894 aa15.54■□□□□ 0.08
LDB3-207ENST00000542786 STXBP4Q6ZWJ1 553 aa15.54■□□□□ 0.08
LDB3-207ENST00000542786 CACNA2D4Q7Z3S7 1137 aa15.54■□□□□ 0.08
LDB3-207ENST00000542786 FHDC1Q9C0D6 1143 aaPredicted RBP15.54■□□□□ 0.08
LDB3-207ENST00000542786 ST6GALNAC4Q9H4F1 302 aa15.54■□□□□ 0.08
LDB3-207ENST00000542786 SPON1Q9HCB6 807 aa15.54■□□□□ 0.08
LDB3-207ENST00000542786 HOXC10Q9NYD6 342 aa15.54■□□□□ 0.08
LDB3-207ENST00000542786 PCDHB13Q9Y5F0 798 aa15.54■□□□□ 0.08
LDB3-207ENST00000542786 NFASCO94856 1347 aa15.54■□□□□ 0.08
LDB3-207ENST00000542786 WDR81Q562E7 1941 aa15.54■□□□□ 0.08
LDB3-207ENST00000542786 TESPA1A2RU30 521 aaPredicted RBP15.54■□□□□ 0.08
LDB3-207ENST00000542786 MAFGO15525 162 aa15.54■□□□□ 0.08
LDB3-207ENST00000542786 KRT86O43790 486 aa15.54■□□□□ 0.08
LDB3-207ENST00000542786 SERPING1P05155 500 aa15.54■□□□□ 0.08
LDB3-207ENST00000542786 PLS3P13797 630 aa15.54■□□□□ 0.08
LDB3-207ENST00000542786 PSMC2P35998 433 aaKnown RBP15.54■□□□□ 0.08
LDB3-207ENST00000542786 ALCAMQ13740 583 aa15.54■□□□□ 0.08
LDB3-207ENST00000542786 MYBPC2Q14324 1141 aa15.54■□□□□ 0.08
LDB3-207ENST00000542786 TREML2Q5T2D2 321 aa15.54■□□□□ 0.08
LDB3-207ENST00000542786 KLHDC7AQ5VTJ3 777 aa15.54■□□□□ 0.08
LDB3-207ENST00000542786 PAPD7Q5XG87 772 aaKnown RBP15.54■□□□□ 0.08
LDB3-207ENST00000542786 TRAPPC11Q7Z392 1133 aa15.54■□□□□ 0.08
LDB3-207ENST00000542786 SRGAP1Q7Z6B7 1085 aa15.54■□□□□ 0.08
LDB3-207ENST00000542786 GPIHBP1Q8IV16 184 aa15.54■□□□□ 0.08
LDB3-207ENST00000542786 FAM186BQ8IYM0 893 aa15.54■□□□□ 0.08
LDB3-207ENST00000542786 CNKSR2Q8WXI2 1034 aa15.54■□□□□ 0.08
LDB3-207ENST00000542786 TIPINQ9BVW5 301 aa15.54■□□□□ 0.08
LDB3-207ENST00000542786 MOV10L1Q9BXT6 1211 aaKnown RBP15.54■□□□□ 0.08
LDB3-207ENST00000542786 GBP3Q9H0R5 595 aa15.54■□□□□ 0.08
LDB3-207ENST00000542786 FBXL5Q9UKA1 691 aa15.54■□□□□ 0.08
LDB3-207ENST00000542786 AJAP1Q9UKB5 411 aaPredicted RBP15.54■□□□□ 0.08
LDB3-207ENST00000542786 TELO2Q9Y4R8 837 aa15.54■□□□□ 0.08
LDB3-207ENST00000542786 KIAA1217Q5T5P2 1943 aa15.53■□□□□ 0.08
LDB3-207ENST00000542786 ZNF862O60290 1169 aa15.53■□□□□ 0.08
LDB3-207ENST00000542786 USO1O60763 962 aaKnown RBP15.53■□□□□ 0.08
LDB3-207ENST00000542786 MCCD1P59942 119 aaPredicted RBP15.53■□□□□ 0.08
LDB3-207ENST00000542786 PRKG1Q13976 671 aa15.53■□□□□ 0.08
LDB3-207ENST00000542786 LBX2Q6XYB7 198 aa15.53■□□□□ 0.08
LDB3-207ENST00000542786 C12orf56Q8IXR9 622 aa15.53■□□□□ 0.08
LDB3-207ENST00000542786 EHBP1Q8NDI1 1231 aa15.53■□□□□ 0.08
LDB3-207ENST00000542786 GOLGA5Q8TBA6 731 aa15.53■□□□□ 0.08
LDB3-207ENST00000542786 UBXN4Q92575 508 aa15.53■□□□□ 0.08
LDB3-207ENST00000542786 CCDC94Q9BW85 323 aaPredicted RBP15.53■□□□□ 0.08
LDB3-207ENST00000542786 IFIH1Q9BYX4 1025 aaKnown RBP15.53■□□□□ 0.08
LDB3-207ENST00000542786 TSGA10Q9BZW7 698 aa15.53■□□□□ 0.08
LDB3-207ENST00000542786 MYO6Q9UM54 1294 aa15.53■□□□□ 0.08
LDB3-207ENST00000542786 SAMM50Q9Y512 469 aa15.53■□□□□ 0.08
LDB3-207ENST00000542786 ARID2Q68CP9 1835 aa15.53■□□□□ 0.08
LDB3-207ENST00000542786 SPATA31C2B4DYI2 1134 aa15.52■□□□□ 0.08
LDB3-207ENST00000542786 IPO7O95373 1038 aaKnown RBP15.52■□□□□ 0.08
LDB3-207ENST00000542786 UCHL3P15374 230 aa15.52■□□□□ 0.08
LDB3-207ENST00000542786 JAM2P57087 298 aa15.52■□□□□ 0.08
LDB3-207ENST00000542786 SPA17Q15506 151 aa15.52■□□□□ 0.08
LDB3-207ENST00000542786 EXOC3L4Q17RC7 722 aa15.52■□□□□ 0.08
LDB3-207ENST00000542786 WHAMMP3Q1A5X7 153 aa15.52■□□□□ 0.08
LDB3-207ENST00000542786 ANO5Q75V66 913 aa15.52■□□□□ 0.08
LDB3-207ENST00000542786 IRF2BP2Q7Z5L9 587 aa15.52■□□□□ 0.08
LDB3-207ENST00000542786 NLRX1Q86UT6 975 aa15.52■□□□□ 0.08
LDB3-207ENST00000542786 RABGGTAQ92696 567 aa15.52■□□□□ 0.08
LDB3-207ENST00000542786 ZNF446Q9NWS9 450 aa15.52■□□□□ 0.08
LDB3-207ENST00000542786 FHOD1Q9Y613 1164 aa15.52■□□□□ 0.08
LDB3-207ENST00000542786 K7ENM7 598 aa15.52■□□□□ 0.07
LDB3-207ENST00000542786 STAM2O75886 525 aa15.52■□□□□ 0.07
LDB3-207ENST00000542786 ATP1A1P05023 1023 aaKnown RBP15.52■□□□□ 0.07
LDB3-207ENST00000542786 ZSCAN20P17040 1043 aaPredicted RBP15.52■□□□□ 0.07
LDB3-207ENST00000542786 NCKAP1LP55160 1127 aa15.52■□□□□ 0.07
LDB3-207ENST00000542786 NPEPPSP55786 919 aa15.52■□□□□ 0.07
LDB3-207ENST00000542786 GTF2BQ00403 316 aa15.52■□□□□ 0.07
LDB3-207ENST00000542786 DCAF17Q5H9S7 520 aaPredicted RBP15.52■□□□□ 0.07
LDB3-207ENST00000542786 PLA2G4FQ68DD2 849 aa15.52■□□□□ 0.07
LDB3-207ENST00000542786 HS2ST1Q7LGA3 356 aa15.52■□□□□ 0.07
LDB3-207ENST00000542786 CHST13Q8NET6 341 aa15.52■□□□□ 0.07
LDB3-207ENST00000542786 LARSQ9P2J5 1176 aaKnown RBP15.52■□□□□ 0.07
LDB3-207ENST00000542786 NENFQ9UMX5 172 aa15.52■□□□□ 0.07
LDB3-207ENST00000542786 AKR1B10O60218 316 aa15.51■□□□□ 0.07
LDB3-207ENST00000542786 YBX3P16989 372 aaKnown RBP eCLIP15.51■□□□□ 0.07
LDB3-207ENST00000542786 GFPT1Q06210 699 aaPredicted RBP15.51■□□□□ 0.07
LDB3-207ENST00000542786 KIF5AQ12840 1032 aa15.51■□□□□ 0.07
LDB3-207ENST00000542786 SLC9C1Q4G0N8 1177 aa15.51■□□□□ 0.07
LDB3-207ENST00000542786 UTP14CQ5TAP6 766 aaKnown RBP15.51■□□□□ 0.07
LDB3-207ENST00000542786 GBP6Q6ZN66 633 aa15.51■□□□□ 0.07
LDB3-207ENST00000542786 SMAP1Q8IYB5 467 aaPredicted RBP15.51■□□□□ 0.07
LDB3-207ENST00000542786 CEP112Q8N8E3 955 aa15.51■□□□□ 0.07
LDB3-207ENST00000542786 OLIG1Q8TAK6 271 aa15.51■□□□□ 0.07
LDB3-207ENST00000542786 SH2D3AQ9BRG2 576 aa15.51■□□□□ 0.07
LDB3-207ENST00000542786 GPRC5CQ9NQ84 441 aa15.51■□□□□ 0.07
LDB3-207ENST00000542786 PDLIM7Q9NR12 457 aa15.51■□□□□ 0.07
LDB3-207ENST00000542786 RNF181Q9P0P0 153 aa15.51■□□□□ 0.07
LDB3-207ENST00000542786 BTBD7Q9P203 1132 aa15.51■□□□□ 0.07
LDB3-207ENST00000542786 SALL4Q9UJQ4 1053 aa15.51■□□□□ 0.07
LDB3-207ENST00000542786 PCDHA10Q9Y5I2 948 aa15.51■□□□□ 0.07
LDB3-207ENST00000542786 LRRC37A2A6NM11 1700 aa15.51■□□□□ 0.07
LDB3-207ENST00000542786 ANO9A1A5B4 782 aa15.5■□□□□ 0.07
LDB3-207ENST00000542786 TISP43B9A030 160 aa15.5■□□□□ 0.07
LDB3-207ENST00000542786 PEX10O60683 326 aa15.5■□□□□ 0.07
LDB3-207ENST00000542786 ICAM3P32942 547 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms