RNA–Protein interactions for RNA: ENST00000542717.1

CHD4-209, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 3

Gene CHD4, Length 204 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-209ENST00000542717 WHAMMQ8TF30 809 aa3.87□□□□□ -1.79
CHD4-209ENST00000542717 SLC22A17Q8WUG5 538 aa3.87□□□□□ -1.79
CHD4-209ENST00000542717 FGF14Q92915 247 aa3.87□□□□□ -1.79
CHD4-209ENST00000542717 DDRGK1Q96HY6 314 aa3.87□□□□□ -1.79
CHD4-209ENST00000542717 PHF12Q96QT6 1004 aa3.87□□□□□ -1.79
CHD4-209ENST00000542717 IER2Q9BTL4 223 aa3.87□□□□□ -1.79
CHD4-209ENST00000542717 CWH43Q9H720 699 aa3.87□□□□□ -1.79
CHD4-209ENST00000542717 EHMT1Q9H9B1 1298 aa3.87□□□□□ -1.79
CHD4-209ENST00000542717 ATP6V0A4Q9HBG4 840 aa3.87□□□□□ -1.79
CHD4-209ENST00000542717 DCP1AQ9NPI6 582 aaPredicted RBP3.87□□□□□ -1.79
CHD4-209ENST00000542717 HEBP1Q9NRV9 189 aa3.87□□□□□ -1.79
CHD4-209ENST00000542717 NYAP2Q9P242 653 aa3.87□□□□□ -1.79
CHD4-209ENST00000542717 ANKMY1Q9P2S6 941 aa3.87□□□□□ -1.79
CHD4-209ENST00000542717 CDY2AQ9Y6F7 541 aa3.87□□□□□ -1.79
CHD4-209ENST00000542717 NOTCH2Q04721 2471 aa3.87□□□□□ -1.79
CHD4-209ENST00000542717 WDFY3Q8IZQ1 3526 aa3.86□□□□□ -1.79
CHD4-209ENST00000542717 CYP2D7A0A087X1C5 515 aa3.86□□□□□ -1.79
CHD4-209ENST00000542717 LNP1A1A4G5 178 aa3.86□□□□□ -1.79
CHD4-209ENST00000542717 DENND3A2RUS2 1198 aa3.86□□□□□ -1.79
CHD4-209ENST00000542717 NT5C1B-RDH14C9J2C7 533 aa3.86□□□□□ -1.79
CHD4-209ENST00000542717 ANHXE9PGG2 379 aa3.86□□□□□ -1.79
CHD4-209ENST00000542717 NOP56O00567 594 aaKnown RBP3.86□□□□□ -1.79
CHD4-209ENST00000542717 MAN2B1O00754 1011 aa3.86□□□□□ -1.79
CHD4-209ENST00000542717 INPPL1O15357 1258 aa3.86□□□□□ -1.79
CHD4-209ENST00000542717 IGSF3O75054 1194 aa3.86□□□□□ -1.79
CHD4-209ENST00000542717 VAMP4O75379 141 aa3.86□□□□□ -1.79
CHD4-209ENST00000542717 UBTFL1P0CB47 393 aaPredicted RBP3.86□□□□□ -1.79
CHD4-209ENST00000542717 FGFR1P11362 822 aa3.86□□□□□ -1.79
CHD4-209ENST00000542717 EDNRBP24530 442 aa3.86□□□□□ -1.79
CHD4-209ENST00000542717 SLC1A4P43007 532 aa3.86□□□□□ -1.79
CHD4-209ENST00000542717 MAPK8P45983 427 aa3.86□□□□□ -1.79
CHD4-209ENST00000542717 SARSP49591 514 aaKnown RBP3.86□□□□□ -1.79
CHD4-209ENST00000542717 ATP8B2P98198 1209 aa3.86□□□□□ -1.79
CHD4-209ENST00000542717 LY6DQ14210 128 aa3.86□□□□□ -1.79
CHD4-209ENST00000542717 ELF2Q15723 593 aa3.86□□□□□ -1.79
CHD4-209ENST00000542717 STXBP2Q15833 593 aa3.86□□□□□ -1.79
CHD4-209ENST00000542717 TAF2Q6P1X5 1199 aa3.86□□□□□ -1.79
CHD4-209ENST00000542717 PARM1Q6UWI2 310 aa3.86□□□□□ -1.79
CHD4-209ENST00000542717 MTSS1LQ765P7 747 aa3.86□□□□□ -1.79
CHD4-209ENST00000542717 GPR155Q7Z3F1 870 aa3.86□□□□□ -1.79
CHD4-209ENST00000542717 PLEKHM2Q8IWE5 1019 aa3.86□□□□□ -1.79
CHD4-209ENST00000542717 SCUBE3Q8IX30 993 aa3.86□□□□□ -1.79
CHD4-209ENST00000542717 DNERQ8NFT8 737 aa3.86□□□□□ -1.79
CHD4-209ENST00000542717 STAG1Q8WVM7 1258 aa3.86□□□□□ -1.79
CHD4-209ENST00000542717 GAB3Q8WWW8 586 aa3.86□□□□□ -1.79
CHD4-209ENST00000542717 KXD1Q9BQD3 176 aa3.86□□□□□ -1.79
CHD4-209ENST00000542717 PHF20Q9BVI0 1012 aa3.86□□□□□ -1.79
CHD4-209ENST00000542717 EMILIN2Q9BXX0 1053 aa3.86□□□□□ -1.79
CHD4-209ENST00000542717 TRIM4Q9C037 500 aa3.86□□□□□ -1.79
CHD4-209ENST00000542717 USP44Q9H0E7 712 aa3.86□□□□□ -1.79
CHD4-209ENST00000542717 AGO3Q9H9G7 860 aaKnown RBP3.86□□□□□ -1.79
CHD4-209ENST00000542717 MLXIPQ9HAP2 919 aa3.86□□□□□ -1.79
CHD4-209ENST00000542717 MKNK2Q9HBH9 465 aa3.86□□□□□ -1.79
CHD4-209ENST00000542717 COPRSQ9NQ92 184 aa3.86□□□□□ -1.79
CHD4-209ENST00000542717 IL17BQ9UHF5 180 aa3.86□□□□□ -1.79
CHD4-209ENST00000542717 PADI3Q9ULW8 664 aa3.86□□□□□ -1.79
CHD4-209ENST00000542717 MTMR7Q9Y216 660 aa3.86□□□□□ -1.79
CHD4-209ENST00000542717 SUPT16HQ9Y5B9 1047 aaKnown RBP3.86□□□□□ -1.79
CHD4-209ENST00000542717 TEX15Q9BXT5 2789 aa3.86□□□□□ -1.79
CHD4-209ENST00000542717 ITPR3Q14573 2671 aa3.86□□□□□ -1.79
CHD4-209ENST00000542717 A0A087WV48 116 aa3.85□□□□□ -1.79
CHD4-209ENST00000542717 TEX51A0A1B0GUA7 166 aa3.85□□□□□ -1.79
CHD4-209ENST00000542717 C2CD2LO14523 706 aa3.85□□□□□ -1.79
CHD4-209ENST00000542717 MAFO75444 373 aaPredicted RBP3.85□□□□□ -1.79
CHD4-209ENST00000542717 RFPL2O75678 378 aa3.85□□□□□ -1.79
CHD4-209ENST00000542717 RHOBTB1O94844 696 aa3.85□□□□□ -1.79
CHD4-209ENST00000542717 GGPS1O95749 300 aa3.85□□□□□ -1.79
CHD4-209ENST00000542717 CFBP00751 764 aa3.85□□□□□ -1.79
CHD4-209ENST00000542717 ICAM1P05362 532 aa3.85□□□□□ -1.79
CHD4-209ENST00000542717 SSBP05455 408 aaKnown RBP eCLIP3.85□□□□□ -1.79
CHD4-209ENST00000542717 MCCP23508 829 aa3.85□□□□□ -1.79
CHD4-209ENST00000542717 ITPKBP27987 946 aa3.85□□□□□ -1.79
CHD4-209ENST00000542717 RAP1GAPP47736 663 aa3.85□□□□□ -1.79
CHD4-209ENST00000542717 PXNP49023 591 aaPredicted RBP3.85□□□□□ -1.79
CHD4-209ENST00000542717 ATXN3P54252 364 aaPredicted RBP3.85□□□□□ -1.79
CHD4-209ENST00000542717 RPS6P62753 249 aaKnown RBP3.85□□□□□ -1.79
CHD4-209ENST00000542717 EXOSC9Q06265 439 aaKnown RBP3.85□□□□□ -1.79
CHD4-209ENST00000542717 CYP4F3Q08477 520 aa3.85□□□□□ -1.79
CHD4-209ENST00000542717 TMEM62Q0P6H9 643 aa3.85□□□□□ -1.79
CHD4-209ENST00000542717 FZD5Q13467 585 aa3.85□□□□□ -1.79
CHD4-209ENST00000542717 HSDL1Q3SXM5 330 aa3.85□□□□□ -1.79
CHD4-209ENST00000542717 UTP14CQ5TAP6 766 aaKnown RBP3.85□□□□□ -1.79
CHD4-209ENST00000542717 IER5Q5VY09 327 aa3.85□□□□□ -1.79
CHD4-209ENST00000542717 CYP26C1Q6V0L0 522 aa3.85□□□□□ -1.79
CHD4-209ENST00000542717 CCNI2Q6ZMN8 369 aaPredicted RBP3.85□□□□□ -1.79
CHD4-209ENST00000542717 MAMSTRQ6ZN01 415 aa3.85□□□□□ -1.79
CHD4-209ENST00000542717 C16orf86Q6ZW13 317 aa3.85□□□□□ -1.79
CHD4-209ENST00000542717 KCTD1Q719H9 257 aa3.85□□□□□ -1.79
CHD4-209ENST00000542717 KRT25Q7Z3Z0 450 aa3.85□□□□□ -1.79
CHD4-209ENST00000542717 RAB44Q7Z6P3 723 aaPredicted RBP3.85□□□□□ -1.79
CHD4-209ENST00000542717 WDR5BQ86VZ2 330 aa3.85□□□□□ -1.79
CHD4-209ENST00000542717 SLC39A11Q8N1S5 342 aa3.85□□□□□ -1.79
CHD4-209ENST00000542717 LRRC43Q8N309 656 aa3.85□□□□□ -1.79
CHD4-209ENST00000542717 SPEM1Q8N4L4 309 aa3.85□□□□□ -1.79
CHD4-209ENST00000542717 HDDC3Q8N4P3 179 aa3.85□□□□□ -1.79
CHD4-209ENST00000542717 DNAJB3Q8WWF6 145 aa3.85□□□□□ -1.79
CHD4-209ENST00000542717 FAM3CQ92520 227 aa3.85□□□□□ -1.79
CHD4-209ENST00000542717 EMID1Q96A84 441 aaPredicted RBP3.85□□□□□ -1.79
CHD4-209ENST00000542717 ADAM2Q99965 735 aa3.85□□□□□ -1.79
CHD4-209ENST00000542717 RIOK1Q9BRS2 568 aaKnown RBP3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms