RNA–Protein interactions for RNA: ENST00000542570.5

TOP3A-208, Transcript of DNA topoisomerase III alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP3A, Length 4,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-208ENST00000542570 GRIN3BO60391 1043 aa11.03□□□□□ -0.64
TOP3A-208ENST00000542570 SEC31AO94979 1220 aaKnown RBP11.03□□□□□ -0.64
TOP3A-208ENST00000542570 JAK3P52333 1124 aa11.03□□□□□ -0.64
TOP3A-208ENST00000542570 KIF22Q14807 665 aa11.03□□□□□ -0.64
TOP3A-208ENST00000542570 GIMAP8Q8ND71 665 aaPredicted RBP11.03□□□□□ -0.64
TOP3A-208ENST00000542570 PNMA5Q96PV4 448 aa11.03□□□□□ -0.64
TOP3A-208ENST00000542570 POP1Q99575 1024 aaKnown RBP11.03□□□□□ -0.64
TOP3A-208ENST00000542570 TARS2Q9BW92 718 aaKnown RBP11.03□□□□□ -0.64
TOP3A-208ENST00000542570 GPBP1L1Q9HC44 474 aaPredicted RBP11.03□□□□□ -0.64
TOP3A-208ENST00000542570 AGTPBP1Q9UPW5 1226 aa11.03□□□□□ -0.64
TOP3A-208ENST00000542570 ATP9AO75110 1047 aa11.02□□□□□ -0.64
TOP3A-208ENST00000542570 SLC7A5Q01650 507 aa11.02□□□□□ -0.64
TOP3A-208ENST00000542570 TTLL4Q14679 1199 aa11.02□□□□□ -0.64
TOP3A-208ENST00000542570 SLC35G1Q2M3R5 365 aa11.02□□□□□ -0.64
TOP3A-208ENST00000542570 C2CD6Q53TS8 623 aa11.02□□□□□ -0.64
TOP3A-208ENST00000542570 GLYCTKQ8IVS8 523 aa11.02□□□□□ -0.64
TOP3A-208ENST00000542570 GOLGA5Q8TBA6 731 aa11.02□□□□□ -0.64
TOP3A-208ENST00000542570 DYDC1Q8WWB3 177 aa11.02□□□□□ -0.64
TOP3A-208ENST00000542570 BBXQ8WY36 941 aaPredicted RBP11.02□□□□□ -0.64
TOP3A-208ENST00000542570 WDR24Q96S15 920 aa11.02□□□□□ -0.64
TOP3A-208ENST00000542570 RGS17Q9UGC6 210 aaPredicted RBP11.02□□□□□ -0.64
TOP3A-208ENST00000542570 THAP12O43422 761 aa11.02□□□□□ -0.65
TOP3A-208ENST00000542570 TNNC2P02585 160 aa11.02□□□□□ -0.65
TOP3A-208ENST00000542570 ATF7P17544 494 aaPredicted RBP11.02□□□□□ -0.65
TOP3A-208ENST00000542570 NT5C2P49902 561 aa11.02□□□□□ -0.65
TOP3A-208ENST00000542570 ACTR2P61160 394 aa11.02□□□□□ -0.65
TOP3A-208ENST00000542570 MAPK6Q16659 721 aa11.02□□□□□ -0.65
TOP3A-208ENST00000542570 ERO1BQ86YB8 467 aa11.02□□□□□ -0.65
TOP3A-208ENST00000542570 RETREG2Q8NC44 543 aa11.02□□□□□ -0.65
TOP3A-208ENST00000542570 PSPC1Q8WXF1 523 aaKnown RBP11.02□□□□□ -0.65
TOP3A-208ENST00000542570 RNF34Q969K3 372 aa11.02□□□□□ -0.65
TOP3A-208ENST00000542570 HAUS4Q9H6D7 363 aa11.02□□□□□ -0.65
TOP3A-208ENST00000542570 TMEM206Q9H813 350 aa11.02□□□□□ -0.65
TOP3A-208ENST00000542570 MKRN1Q9UHC7 482 aaKnown RBP11.02□□□□□ -0.65
TOP3A-208ENST00000542570 NUB1Q9Y5A7 615 aa11.02□□□□□ -0.65
TOP3A-208ENST00000542570 ACTN2P35609 894 aa11.02□□□□□ -0.65
TOP3A-208ENST00000542570 SREBF1P36956 1147 aa11.02□□□□□ -0.65
TOP3A-208ENST00000542570 NEDD9Q14511 834 aa11.02□□□□□ -0.65
TOP3A-208ENST00000542570 NCAPHQ15003 741 aa11.02□□□□□ -0.65
TOP3A-208ENST00000542570 ZNF568Q3ZCX4 644 aa11.02□□□□□ -0.65
TOP3A-208ENST00000542570 E4F1Q66K89 784 aaPredicted RBP11.02□□□□□ -0.65
TOP3A-208ENST00000542570 HAS1Q92839 578 aa11.02□□□□□ -0.65
TOP3A-208ENST00000542570 COPS5Q92905 334 aa11.02□□□□□ -0.65
TOP3A-208ENST00000542570 CCDC51Q96ER9 411 aa11.02□□□□□ -0.65
TOP3A-208ENST00000542570 C7orf25Q9BPX7 421 aa11.02□□□□□ -0.65
TOP3A-208ENST00000542570 PDE6CP51160 858 aa11.01□□□□□ -0.65
TOP3A-208ENST00000542570 HERVK_113P62684 666 aa11.01□□□□□ -0.65
TOP3A-208ENST00000542570 BMS1Q14692 1282 aaKnown RBP11.01□□□□□ -0.65
TOP3A-208ENST00000542570 PPP2R5DQ14738 602 aa11.01□□□□□ -0.65
TOP3A-208ENST00000542570 PPP2R5AQ15172 486 aa11.01□□□□□ -0.65
TOP3A-208ENST00000542570 KIAA1755Q5JYT7 1200 aa11.01□□□□□ -0.65
TOP3A-208ENST00000542570 SPOUT1Q5T280 376 aaKnown RBP11.01□□□□□ -0.65
TOP3A-208ENST00000542570 MTRQ99707 1265 aa11.01□□□□□ -0.65
TOP3A-208ENST00000542570 PAIP2Q9BPZ3 127 aaKnown RBP11.01□□□□□ -0.65
TOP3A-208ENST00000542570 SEMA6BQ9H3T3 888 aa11.01□□□□□ -0.65
TOP3A-208ENST00000542570 A1CFQ9NQ94 594 aaKnown RBP11.01□□□□□ -0.65
TOP3A-208ENST00000542570 PNMA2Q9UL42 364 aa11.01□□□□□ -0.65
TOP3A-208ENST00000542570 ZNF142P52746 1687 aaPredicted RBP11.01□□□□□ -0.65
TOP3A-208ENST00000542570 PITPNM2Q9BZ72 1349 aa11.01□□□□□ -0.65
TOP3A-208ENST00000542570 COPB2P35606 906 aa11.01□□□□□ -0.65
TOP3A-208ENST00000542570 FXR2P51116 673 aaKnown RBP eCLIP11.01□□□□□ -0.653e-9■■■■■ 34.7
TOP3A-208ENST00000542570 CLCN3P51790 818 aa11.01□□□□□ -0.65
TOP3A-208ENST00000542570 ARPP19P56211 112 aa11.01□□□□□ -0.65
TOP3A-208ENST00000542570 RAD9BQ6WBX8 426 aa11.01□□□□□ -0.65
TOP3A-208ENST00000542570 HOOK3Q86VS8 718 aa11.01□□□□□ -0.65
TOP3A-208ENST00000542570 GMCL1P1Q8NEA9 526 aa11.01□□□□□ -0.65
TOP3A-208ENST00000542570 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.01□□□□□ -0.65
TOP3A-208ENST00000542570 BCAS3Q9H6U6 928 aa11.01□□□□□ -0.65
TOP3A-208ENST00000542570 TYW1Q9NV66 732 aaKnown RBP11.01□□□□□ -0.65
TOP3A-208ENST00000542570 PTPN22Q9Y2R2 807 aa11.01□□□□□ -0.65
TOP3A-208ENST00000542570 CDC25BP30305 580 aa11.01□□□□□ -0.65
TOP3A-208ENST00000542570 PTK2Q05397 1052 aa11.01□□□□□ -0.65
TOP3A-208ENST00000542570 SNX1Q13596 522 aa11.01□□□□□ -0.65
TOP3A-208ENST00000542570 DRAP1Q14919 205 aaPredicted RBP11.01□□□□□ -0.65
TOP3A-208ENST00000542570 LONRF2Q1L5Z9 754 aa11.01□□□□□ -0.65
TOP3A-208ENST00000542570 TMEM270Q6UE05 265 aa11.01□□□□□ -0.65
TOP3A-208ENST00000542570 CCDC105Q8IYK2 499 aa11.01□□□□□ -0.65
TOP3A-208ENST00000542570 UBLCP1Q8WVY7 318 aaPredicted RBP11.01□□□□□ -0.65
TOP3A-208ENST00000542570 ANKS1AQ92625 1134 aa11.01□□□□□ -0.65
TOP3A-208ENST00000542570 FAM149B1Q96BN6 582 aa11.01□□□□□ -0.65
TOP3A-208ENST00000542570 ZNF653Q96CK0 615 aa11.01□□□□□ -0.65
TOP3A-208ENST00000542570 CBWD1Q9BRT8 395 aa11.01□□□□□ -0.65
TOP3A-208ENST00000542570 ASCC2Q9H1I8 757 aaPredicted RBP11.01□□□□□ -0.65
TOP3A-208ENST00000542570 KBTBD4Q9NVX7 518 aa11.01□□□□□ -0.65
TOP3A-208ENST00000542570 PCDHA13Q9Y5I0 950 aa11.01□□□□□ -0.65
TOP3A-208ENST00000542570 RGPD1P0DJD0 1748 aa11□□□□□ -0.65
TOP3A-208ENST00000542570 ATP2C2O75185 946 aa11□□□□□ -0.65
TOP3A-208ENST00000542570 TCF7P36402 384 aaPredicted RBP11□□□□□ -0.65
TOP3A-208ENST00000542570 VAMP7P51809 220 aa11□□□□□ -0.65
TOP3A-208ENST00000542570 NAALADL2Q58DX5 795 aa11□□□□□ -0.65
TOP3A-208ENST00000542570 PRAMEF19Q5SWL8 479 aa11□□□□□ -0.65
TOP3A-208ENST00000542570 BSPRYQ5W0U4 402 aa11□□□□□ -0.65
TOP3A-208ENST00000542570 LEKR1Q6ZMV7 388 aa11□□□□□ -0.65
TOP3A-208ENST00000542570 SND1Q7KZF4 910 aaKnown RBP eCLIP11□□□□□ -0.65
TOP3A-208ENST00000542570 GPRC5AQ8NFJ5 357 aa11□□□□□ -0.65
TOP3A-208ENST00000542570 AP1M1Q9BXS5 423 aa11□□□□□ -0.65
TOP3A-208ENST00000542570 TSGA10Q9BZW7 698 aa11□□□□□ -0.65
TOP3A-208ENST00000542570 KIAA1683Q9H0B3 1180 aa11□□□□□ -0.65
TOP3A-208ENST00000542570 GBA2Q9HCG7 927 aaPredicted RBP11□□□□□ -0.65
TOP3A-208ENST00000542570 BLOC1S4Q9NUP1 217 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms