RNA–Protein interactions for RNA: ENST00000542002.5

YBX3-212, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 952 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-212ENST00000542002 TRPV2Q9Y5S1 764 aa10.92□□□□□ -0.66
YBX3-212ENST00000542002 KDM3AQ9Y4C1 1321 aa10.91□□□□□ -0.66
YBX3-212ENST00000542002 LCHNA4D1U4 455 aa10.91□□□□□ -0.66
YBX3-212ENST00000542002 H3BQV1 296 aa10.91□□□□□ -0.66
YBX3-212ENST00000542002 MAGEB2O15479 319 aa10.91□□□□□ -0.66
YBX3-212ENST00000542002 MAFO75444 373 aaPredicted RBP10.91□□□□□ -0.66
YBX3-212ENST00000542002 MED24O75448 989 aa10.91□□□□□ -0.66
YBX3-212ENST00000542002 OR52Z1P0C646 297 aa10.91□□□□□ -0.66
YBX3-212ENST00000542002 SYT1P21579 422 aa10.91□□□□□ -0.66
YBX3-212ENST00000542002 YWHABP31946 246 aaKnown RBP10.91□□□□□ -0.66
YBX3-212ENST00000542002 GRIN2CQ14957 1233 aa10.91□□□□□ -0.66
YBX3-212ENST00000542002 TSHZ1Q6ZSZ6 1077 aa10.91□□□□□ -0.66
YBX3-212ENST00000542002 CATSPER3Q86XQ3 398 aa10.91□□□□□ -0.66
YBX3-212ENST00000542002 LINC01599Q8WXQ3 324 aa10.91□□□□□ -0.66
YBX3-212ENST00000542002 INTS4Q96HW7 963 aaKnown RBP10.91□□□□□ -0.66
YBX3-212ENST00000542002 MTIF3Q9H2K0 278 aaKnown RBP10.91□□□□□ -0.66
YBX3-212ENST00000542002 ZSWIM4Q9H7M6 989 aa10.91□□□□□ -0.66
YBX3-212ENST00000542002 CYP26B1Q9NR63 512 aa10.91□□□□□ -0.66
YBX3-212ENST00000542002 PADI3Q9ULW8 664 aa10.91□□□□□ -0.66
YBX3-212ENST00000542002 CEP131Q9UPN4 1083 aa10.91□□□□□ -0.66
YBX3-212ENST00000542002 GINS2Q9Y248 185 aa10.91□□□□□ -0.66
YBX3-212ENST00000542002 KIF3AQ9Y496 699 aa10.91□□□□□ -0.66
YBX3-212ENST00000542002 MGEA5O60502 916 aa10.9□□□□□ -0.66
YBX3-212ENST00000542002 CSDE1O75534 798 aaKnown RBP10.9□□□□□ -0.66
YBX3-212ENST00000542002 LYPLA2O95372 231 aa10.9□□□□□ -0.66
YBX3-212ENST00000542002 CA3P07451 260 aa10.9□□□□□ -0.66
YBX3-212ENST00000542002 CRYBB1P53674 252 aaPredicted RBP10.9□□□□□ -0.66
YBX3-212ENST00000542002 NLRP11P59045 1033 aaKnown RBP10.9□□□□□ -0.66
YBX3-212ENST00000542002 TBC1D8BQ0IIM8 1120 aa10.9□□□□□ -0.66
YBX3-212ENST00000542002 ORC2Q13416 577 aaPredicted RBP10.9□□□□□ -0.66
YBX3-212ENST00000542002 FAM117BQ6P1L5 589 aa10.9□□□□□ -0.66
YBX3-212ENST00000542002 FERMT3Q86UX7 667 aa10.9□□□□□ -0.66
YBX3-212ENST00000542002 KSR1Q8IVT5 923 aa10.9□□□□□ -0.66
YBX3-212ENST00000542002 CRIPAKQ8N1N5 446 aa10.9□□□□□ -0.66
YBX3-212ENST00000542002 PIGOQ8TEQ8 1089 aa10.9□□□□□ -0.66
YBX3-212ENST00000542002 TOP1MTQ969P6 601 aa10.9□□□□□ -0.66
YBX3-212ENST00000542002 CEP170P1Q96L14 293 aa10.9□□□□□ -0.66
YBX3-212ENST00000542002 SLC9A7Q96T83 725 aa10.9□□□□□ -0.66
YBX3-212ENST00000542002 CDX2Q99626 313 aaPredicted RBP10.9□□□□□ -0.66
YBX3-212ENST00000542002 OSMRQ99650 979 aa10.9□□□□□ -0.66
YBX3-212ENST00000542002 ZNF576Q9H609 170 aa10.9□□□□□ -0.66
YBX3-212ENST00000542002 DHX33Q9H6R0 707 aaKnown RBP10.9□□□□□ -0.66
YBX3-212ENST00000542002 NOL7Q9UMY1 257 aaKnown RBP10.9□□□□□ -0.66
YBX3-212ENST00000542002 ST3GAL5Q9UNP4 418 aa10.9□□□□□ -0.66
YBX3-212ENST00000542002 PCDHA11Q9Y5I1 949 aa10.9□□□□□ -0.66
YBX3-212ENST00000542002 SQORQ9Y6N5 450 aa10.9□□□□□ -0.66
YBX3-212ENST00000542002 COL6A3P12111 3177 aa10.9□□□□□ -0.66
YBX3-212ENST00000542002 CHD7Q9P2D1 2997 aa10.89□□□□□ -0.67
YBX3-212ENST00000542002 TANC1Q9C0D5 1861 aa10.89□□□□□ -0.67
YBX3-212ENST00000542002 EYSQ5T1H1 3165 aa10.89□□□□□ -0.67
YBX3-212ENST00000542002 PP2D1A8MPX8 630 aa10.89□□□□□ -0.67
YBX3-212ENST00000542002 GJB5O95377 273 aa10.89□□□□□ -0.67
YBX3-212ENST00000542002 CDC25AP30304 524 aa10.89□□□□□ -0.67
YBX3-212ENST00000542002 KCNJ6P48051 423 aa10.89□□□□□ -0.67
YBX3-212ENST00000542002 GPC3P51654 580 aa10.89□□□□□ -0.67
YBX3-212ENST00000542002 RILPL1Q5EBL4 403 aa10.89□□□□□ -0.67
YBX3-212ENST00000542002 ZNF697Q5TEC3 545 aa10.89□□□□□ -0.67
YBX3-212ENST00000542002 FAM173BQ6P4H8 233 aa10.89□□□□□ -0.67
YBX3-212ENST00000542002 FAM228AQ86W67 206 aa10.89□□□□□ -0.67
YBX3-212ENST00000542002 IGSF22Q8N9C0 903 aa10.89□□□□□ -0.67
YBX3-212ENST00000542002 APBB2Q92870 758 aa10.89□□□□□ -0.67
YBX3-212ENST00000542002 TMEM143Q96AN5 459 aa10.89□□□□□ -0.67
YBX3-212ENST00000542002 POLR3CQ9BUI4 534 aaPredicted RBP10.89□□□□□ -0.67
YBX3-212ENST00000542002 ERVK-5Q9HDB9 667 aa10.89□□□□□ -0.67
YBX3-212ENST00000542002 BMP2KQ9NSY1 1161 aaPredicted RBP10.89□□□□□ -0.67
YBX3-212ENST00000542002 SUCLA2Q9P2R7 463 aaPredicted RBP10.89□□□□□ -0.67
YBX3-212ENST00000542002 MSRAQ9UJ68 235 aa10.89□□□□□ -0.67
YBX3-212ENST00000542002 MTMR6Q9Y217 621 aa10.89□□□□□ -0.67
YBX3-212ENST00000542002 AKT3Q9Y243 479 aa10.89□□□□□ -0.67
YBX3-212ENST00000542002 VPS37CA5D8V6 355 aaPredicted RBP10.88□□□□□ -0.67
YBX3-212ENST00000542002 EPOPA6NHQ4 379 aa10.88□□□□□ -0.67
YBX3-212ENST00000542002 M0QZ92 97 aa10.88□□□□□ -0.67
YBX3-212ENST00000542002 TLL1O43897 1013 aa10.88□□□□□ -0.67
YBX3-212ENST00000542002 UPP2O95045 317 aa10.88□□□□□ -0.67
YBX3-212ENST00000542002 RPLP2P05387 115 aaKnown RBP10.88□□□□□ -0.67
YBX3-212ENST00000542002 FGFR4P22455 802 aa10.88□□□□□ -0.67
YBX3-212ENST00000542002 TMOD1P28289 359 aa10.88□□□□□ -0.67
YBX3-212ENST00000542002 HTRA4P83105 476 aaPredicted RBP10.88□□□□□ -0.67
YBX3-212ENST00000542002 ATP2C1P98194 919 aaPredicted RBP10.88□□□□□ -0.67
YBX3-212ENST00000542002 TAP1Q03518 808 aa10.88□□□□□ -0.67
YBX3-212ENST00000542002 NFX1Q12986 1120 aaKnown RBP10.88□□□□□ -0.67
YBX3-212ENST00000542002 RESTQ13127 1097 aa10.88□□□□□ -0.67
YBX3-212ENST00000542002 PDIA5Q14554 519 aa10.88□□□□□ -0.67
YBX3-212ENST00000542002 RAB30Q15771 203 aa10.88□□□□□ -0.67
YBX3-212ENST00000542002 XKR9Q5GH70 373 aa10.88□□□□□ -0.67
YBX3-212ENST00000542002 POTEGQ6S5H5 508 aa10.88□□□□□ -0.67
YBX3-212ENST00000542002 MYOCDQ8IZQ8 938 aa10.88□□□□□ -0.67
YBX3-212ENST00000542002 USP38Q8NB14 1042 aa10.88□□□□□ -0.67
YBX3-212ENST00000542002 PRPF31Q8WWY3 499 aaKnown RBP10.88□□□□□ -0.67
YBX3-212ENST00000542002 RAD9AQ99638 391 aa10.88□□□□□ -0.67
YBX3-212ENST00000542002 MMTAG2Q9BU76 263 aaKnown RBP10.88□□□□□ -0.67
YBX3-212ENST00000542002 CERS4Q9HA82 394 aa10.88□□□□□ -0.67
YBX3-212ENST00000542002 XPNPEP1Q9NQW7 623 aa10.88□□□□□ -0.67
YBX3-212ENST00000542002 ANKEF1Q9NU02 776 aa10.88□□□□□ -0.67
YBX3-212ENST00000542002 A0A087WZ62 844 aa10.87□□□□□ -0.67
YBX3-212ENST00000542002 RFXAPO00287 272 aa10.87□□□□□ -0.67
YBX3-212ENST00000542002 DKC1O60832 514 aaKnown RBP eCLIP10.87□□□□□ -0.67
YBX3-212ENST00000542002 EFCAB14O75071 495 aa10.87□□□□□ -0.67
YBX3-212ENST00000542002 RPS6KA5O75582 802 aa10.87□□□□□ -0.67
YBX3-212ENST00000542002 AMHP03971 560 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms