RNA–Protein interactions for RNA: ENST00000541963.5

CPSF7-220, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4 BASIC

Gene CPSF7, Length 549 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-220ENST00000541963 RPS12P25398 132 aaKnown RBP6.63□□□□□ -1.35
CPSF7-220ENST00000541963 CTSKP43235 329 aa6.63□□□□□ -1.35
CPSF7-220ENST00000541963 RARSP54136 660 aaKnown RBP6.63□□□□□ -1.35
CPSF7-220ENST00000541963 RBM10P98175 930 aaKnown RBP6.63□□□□□ -1.35
CPSF7-220ENST00000541963 C21orf62-AS1Q17RA5 79 aa6.63□□□□□ -1.35
CPSF7-220ENST00000541963 EEF1DP3Q658K8 133 aa6.63□□□□□ -1.35
CPSF7-220ENST00000541963 IQCEQ6IPM2 695 aa6.63□□□□□ -1.35
CPSF7-220ENST00000541963 LDHAL6AQ6ZMR3 332 aa6.63□□□□□ -1.35
CPSF7-220ENST00000541963 USP53Q70EK8 1073 aa6.63□□□□□ -1.35
CPSF7-220ENST00000541963 ANKRD13AQ8IZ07 590 aa6.63□□□□□ -1.35
CPSF7-220ENST00000541963 NAT16Q8N8M0 369 aa6.63□□□□□ -1.35
CPSF7-220ENST00000541963 TMEM145Q8NBT3 493 aa6.63□□□□□ -1.35
CPSF7-220ENST00000541963 DPF2Q92785 391 aa6.63□□□□□ -1.35
CPSF7-220ENST00000541963 NINJ1Q92982 152 aa6.63□□□□□ -1.35
CPSF7-220ENST00000541963 KIF16BQ96L93 1317 aa6.63□□□□□ -1.35
CPSF7-220ENST00000541963 CDADC1Q9BWV3 514 aa6.63□□□□□ -1.35
CPSF7-220ENST00000541963 FOXP3Q9BZS1 431 aa6.63□□□□□ -1.35
CPSF7-220ENST00000541963 DBNDD1Q9H9R9 158 aa6.63□□□□□ -1.35
CPSF7-220ENST00000541963 CNNM1Q9NRU3 951 aa6.63□□□□□ -1.35
CPSF7-220ENST00000541963 ADARB2Q9NS39 739 aaKnown RBP6.63□□□□□ -1.35
CPSF7-220ENST00000541963 ZC3H7BQ9UGR2 993 aaKnown RBP6.63□□□□□ -1.35
CPSF7-220ENST00000541963 VAV3Q9UKW4 847 aa6.63□□□□□ -1.35
CPSF7-220ENST00000541963 ZNF804BA4D1E1 1349 aa6.62□□□□□ -1.35
CPSF7-220ENST00000541963 ZBED9Q6R2W3 1325 aa6.62□□□□□ -1.35
CPSF7-220ENST00000541963 MEFVO15553 781 aaPredicted RBP6.62□□□□□ -1.35
CPSF7-220ENST00000541963 ZNF205O95201 554 aa6.62□□□□□ -1.35
CPSF7-220ENST00000541963 PROCP04070 461 aa6.62□□□□□ -1.35
CPSF7-220ENST00000541963 NBPF7P0C2Y1 421 aaPredicted RBP6.62□□□□□ -1.35
CPSF7-220ENST00000541963 NAT1P18440 290 aa6.62□□□□□ -1.35
CPSF7-220ENST00000541963 MMP14P50281 582 aa6.62□□□□□ -1.35
CPSF7-220ENST00000541963 PRKCQQ04759 706 aa6.62□□□□□ -1.35
CPSF7-220ENST00000541963 EGR3Q06889 387 aa6.62□□□□□ -1.35
CPSF7-220ENST00000541963 CHRNDQ07001 517 aa6.62□□□□□ -1.35
CPSF7-220ENST00000541963 PABPC4Q13310 644 aaKnown RBP eCLIP6.62□□□□□ -1.35
CPSF7-220ENST00000541963 SF1Q15637 639 aaKnown RBP6.62□□□□□ -1.35
CPSF7-220ENST00000541963 RCSD1Q6JBY9 416 aa6.62□□□□□ -1.35
CPSF7-220ENST00000541963 STK11IPQ8N1F8 1099 aa6.62□□□□□ -1.35
CPSF7-220ENST00000541963 DCAF4Q8WV16 495 aa6.62□□□□□ -1.35
CPSF7-220ENST00000541963 PTPRN2Q92932 1015 aa6.62□□□□□ -1.35
CPSF7-220ENST00000541963 MFSD3Q96ES6 412 aa6.62□□□□□ -1.35
CPSF7-220ENST00000541963 SUCLG2Q96I99 432 aa6.62□□□□□ -1.35
CPSF7-220ENST00000541963 FCRL3Q96P31 734 aaPredicted RBP6.62□□□□□ -1.35
CPSF7-220ENST00000541963 SLC12A9Q9BXP2 914 aa6.62□□□□□ -1.35
CPSF7-220ENST00000541963 COA1Q9GZY4 146 aa6.62□□□□□ -1.35
CPSF7-220ENST00000541963 SEMA3GQ9NS98 782 aa6.62□□□□□ -1.35
CPSF7-220ENST00000541963 GPRC5DQ9NZD1 345 aa6.62□□□□□ -1.35
CPSF7-220ENST00000541963 NDOR1Q9UHB4 597 aa6.62□□□□□ -1.35
CPSF7-220ENST00000541963 SFMBT1Q9UHJ3 866 aa6.62□□□□□ -1.35
CPSF7-220ENST00000541963 CNOT7Q9UIV1 285 aaKnown RBP6.62□□□□□ -1.35
CPSF7-220ENST00000541963 MED23Q9ULK4 1368 aa6.61□□□□□ -1.35
CPSF7-220ENST00000541963 MROH5Q6ZUA9 1318 aa6.61□□□□□ -1.35
CPSF7-220ENST00000541963 PITPNM2Q9BZ72 1349 aa6.61□□□□□ -1.35
CPSF7-220ENST00000541963 PRR19A6NJB7 356 aa6.61□□□□□ -1.35
CPSF7-220ENST00000541963 YDJCA8MPS7 323 aa6.61□□□□□ -1.35
CPSF7-220ENST00000541963 PSMD14O00487 310 aa6.61□□□□□ -1.35
CPSF7-220ENST00000541963 PLIN1O60240 522 aa6.61□□□□□ -1.35
CPSF7-220ENST00000541963 FKTNO75072 461 aa6.61□□□□□ -1.35
CPSF7-220ENST00000541963 TBC1D8O95759 1140 aa6.61□□□□□ -1.35
CPSF7-220ENST00000541963 CAPNS1P04632 268 aa6.61□□□□□ -1.35
CPSF7-220ENST00000541963 GNAI3P08754 354 aa6.61□□□□□ -1.35
CPSF7-220ENST00000541963 VIL1P09327 827 aaKnown RBP6.61□□□□□ -1.35
CPSF7-220ENST00000541963 UBTFL1P0CB47 393 aaPredicted RBP6.61□□□□□ -1.35
CPSF7-220ENST00000541963 PAMP19021 973 aa6.61□□□□□ -1.35
CPSF7-220ENST00000541963 RPL10P27635 214 aaKnown RBP6.61□□□□□ -1.35
CPSF7-220ENST00000541963 EPS15P42566 896 aa6.61□□□□□ -1.35
CPSF7-220ENST00000541963 GMPSP49915 693 aaPredicted RBP6.61□□□□□ -1.35
CPSF7-220ENST00000541963 PTPROQ16827 1216 aa6.61□□□□□ -1.35
CPSF7-220ENST00000541963 GAB4Q2WGN9 574 aa6.61□□□□□ -1.35
CPSF7-220ENST00000541963 ZKSCAN2Q63HK3 967 aa6.61□□□□□ -1.35
CPSF7-220ENST00000541963 MAMDC2Q7Z304 686 aaPredicted RBP6.61□□□□□ -1.35
CPSF7-220ENST00000541963 PPIL6Q8IXY8 311 aa6.61□□□□□ -1.35
CPSF7-220ENST00000541963 DHX37Q8IY37 1157 aaKnown RBP6.61□□□□□ -1.35
CPSF7-220ENST00000541963 CNTROBQ8N137 903 aa6.61□□□□□ -1.35
CPSF7-220ENST00000541963 AGBL3Q8NEM8 1001 aa6.61□□□□□ -1.35
CPSF7-220ENST00000541963 FRAT1Q92837 279 aaPredicted RBP6.61□□□□□ -1.35
CPSF7-220ENST00000541963 MAGEB10Q96LZ2 347 aaPredicted RBP6.61□□□□□ -1.35
CPSF7-220ENST00000541963 USP44Q9H0E7 712 aa6.61□□□□□ -1.35
CPSF7-220ENST00000541963 SEMA6BQ9H3T3 888 aa6.61□□□□□ -1.35
CPSF7-220ENST00000541963 ATP13A1Q9HD20 1204 aa6.61□□□□□ -1.35
CPSF7-220ENST00000541963 PCDHA11Q9Y5I1 949 aa6.61□□□□□ -1.35
CPSF7-220ENST00000541963 U3KQE9 123 aa6.61□□□□□ -1.35
CPSF7-220ENST00000541963 LRRC37AA6NMS7 1700 aa6.61□□□□□ -1.35
CPSF7-220ENST00000541963 MYO3BQ8WXR4 1341 aa6.6□□□□□ -1.35
CPSF7-220ENST00000541963 hCG_2014768A0A024R1R8 64 aa6.6□□□□□ -1.35
CPSF7-220ENST00000541963 NPHP3-ACAD11A0A0J9YXS1 232 aa6.6□□□□□ -1.35
CPSF7-220ENST00000541963 WASH4PA8MWX3 477 aa6.6□□□□□ -1.35
CPSF7-220ENST00000541963 AQP7O14520 342 aa6.6□□□□□ -1.35
CPSF7-220ENST00000541963 TAF5LO75529 589 aa6.6□□□□□ -1.35
CPSF7-220ENST00000541963 THBDP07204 575 aa6.6□□□□□ -1.35
CPSF7-220ENST00000541963 IFNGR1P15260 489 aa6.6□□□□□ -1.35
CPSF7-220ENST00000541963 FLT3P36888 993 aa6.6□□□□□ -1.35
CPSF7-220ENST00000541963 ANAPC15P60006 121 aa6.6□□□□□ -1.35
CPSF7-220ENST00000541963 IKZF1Q13422 519 aa6.6□□□□□ -1.35
CPSF7-220ENST00000541963 UBE4AQ14139 1066 aa6.6□□□□□ -1.35
CPSF7-220ENST00000541963 CBX2Q14781 532 aaPredicted RBP6.6□□□□□ -1.35
CPSF7-220ENST00000541963 RABL6Q3YEC7 729 aaPredicted RBP6.6□□□□□ -1.35
CPSF7-220ENST00000541963 EPHA10Q5JZY3 1008 aa6.6□□□□□ -1.35
CPSF7-220ENST00000541963 STRIP1Q5VSL9 837 aa6.6□□□□□ -1.35
CPSF7-220ENST00000541963 E4F1Q66K89 784 aaPredicted RBP6.6□□□□□ -1.35
CPSF7-220ENST00000541963 TTLL5Q6EMB2 1281 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms