RNA–Protein interactions for RNA: ENST00000541770.1

CLSTN3-212, Transcript of calsyntenin 3, humanhuman

TSL 3

Gene CLSTN3, Length 568 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-212ENST00000541770 BICD2Q8TD16 824 aa9.87□□□□□ -0.83
CLSTN3-212ENST00000541770 LINC01599Q8WXQ3 324 aa9.87□□□□□ -0.83
CLSTN3-212ENST00000541770 ZBTB10Q96DT7 871 aa9.87□□□□□ -0.83
CLSTN3-212ENST00000541770 AIFM3Q96NN9 605 aa9.87□□□□□ -0.83
CLSTN3-212ENST00000541770 INPP4AQ96PE3 977 aaPredicted RBP9.87□□□□□ -0.83
CLSTN3-212ENST00000541770 IRF2BPLQ9H1B7 796 aa9.87□□□□□ -0.83
CLSTN3-212ENST00000541770 AGO3Q9H9G7 860 aaKnown RBP9.87□□□□□ -0.83
CLSTN3-212ENST00000541770 PIEZO1Q92508 2521 aa9.87□□□□□ -0.83
CLSTN3-212ENST00000541770 SPDYE3A6NKU9 549 aa9.86□□□□□ -0.83
CLSTN3-212ENST00000541770 PDGFBP01127 241 aaPredicted RBP9.86□□□□□ -0.83
CLSTN3-212ENST00000541770 NLRP5P59047 1200 aa9.86□□□□□ -0.83
CLSTN3-212ENST00000541770 NFX1Q12986 1120 aaKnown RBP9.86□□□□□ -0.83
CLSTN3-212ENST00000541770 PAK2Q13177 524 aa9.86□□□□□ -0.83
CLSTN3-212ENST00000541770 CBX2Q14781 532 aaPredicted RBP9.86□□□□□ -0.83
CLSTN3-212ENST00000541770 UBE2SQ16763 222 aa9.86□□□□□ -0.83
CLSTN3-212ENST00000541770 IER5Q5VY09 327 aa9.86□□□□□ -0.83
CLSTN3-212ENST00000541770 RTN4RL1Q86UN2 441 aaPredicted RBP9.86□□□□□ -0.83
CLSTN3-212ENST00000541770 SEPT1Q8WYJ6 367 aa9.86□□□□□ -0.83
CLSTN3-212ENST00000541770 PHF20Q9BVI0 1012 aa9.86□□□□□ -0.83
CLSTN3-212ENST00000541770 FTHL17Q9BXU8 183 aa9.86□□□□□ -0.83
CLSTN3-212ENST00000541770 TSHZ2Q9NRE2 1034 aa9.86□□□□□ -0.83
CLSTN3-212ENST00000541770 ERAP1Q9NZ08 941 aa9.86□□□□□ -0.83
CLSTN3-212ENST00000541770 PCDHA4Q9UN74 947 aa9.86□□□□□ -0.83
CLSTN3-212ENST00000541770 KIF3AQ9Y496 699 aa9.86□□□□□ -0.83
CLSTN3-212ENST00000541770 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.86□□□□□ -0.83
CLSTN3-212ENST00000541770 PCDHB12Q9Y5F1 795 aa9.86□□□□□ -0.83
CLSTN3-212ENST00000541770 TRPV2Q9Y5S1 764 aa9.86□□□□□ -0.83
CLSTN3-212ENST00000541770 TBKBP1A7MCY6 615 aa9.85□□□□□ -0.83
CLSTN3-212ENST00000541770 M0R2N6 131 aa9.85□□□□□ -0.83
CLSTN3-212ENST00000541770 ATP9AO75110 1047 aa9.85□□□□□ -0.83
CLSTN3-212ENST00000541770 SRGAP2BP0DMP2 458 aa9.85□□□□□ -0.83
CLSTN3-212ENST00000541770 TECP42680 631 aa9.85□□□□□ -0.83
CLSTN3-212ENST00000541770 NPY5RQ15761 445 aa9.85□□□□□ -0.83
CLSTN3-212ENST00000541770 PTPN21Q16825 1174 aa9.85□□□□□ -0.83
CLSTN3-212ENST00000541770 TMEM266Q2M3C6 531 aa9.85□□□□□ -0.83
CLSTN3-212ENST00000541770 PLPP4Q5VZY2 271 aa9.85□□□□□ -0.83
CLSTN3-212ENST00000541770 LLGL2Q6P1M3 1020 aa9.85□□□□□ -0.83
CLSTN3-212ENST00000541770 XRRA1Q6P2D8 792 aa9.85□□□□□ -0.83
CLSTN3-212ENST00000541770 HSCBQ8IWL3 235 aa9.85□□□□□ -0.83
CLSTN3-212ENST00000541770 THNSL1Q8IYQ7 743 aa9.85□□□□□ -0.83
CLSTN3-212ENST00000541770 BLIDQ8IZY5 108 aa9.85□□□□□ -0.83
CLSTN3-212ENST00000541770 REXO1Q8N1G1 1221 aaKnown RBP9.85□□□□□ -0.83
CLSTN3-212ENST00000541770 FAM184AQ8NB25 1140 aa9.85□□□□□ -0.83
CLSTN3-212ENST00000541770 GIMAP8Q8ND71 665 aaPredicted RBP9.85□□□□□ -0.83
CLSTN3-212ENST00000541770 ASIC4Q96FT7 647 aa9.85□□□□□ -0.83
CLSTN3-212ENST00000541770 INTS4Q96HW7 963 aaKnown RBP9.85□□□□□ -0.83
CLSTN3-212ENST00000541770 SMARCAD1Q9H4L7 1026 aa9.85□□□□□ -0.83
CLSTN3-212ENST00000541770 AAASQ9NRG9 546 aa9.85□□□□□ -0.83
CLSTN3-212ENST00000541770 PADI3Q9ULW8 664 aa9.85□□□□□ -0.83
CLSTN3-212ENST00000541770 PCDHA6Q9UN73 950 aa9.85□□□□□ -0.83
CLSTN3-212ENST00000541770 TRPC6Q9Y210 931 aa9.85□□□□□ -0.83
CLSTN3-212ENST00000541770 GINS2Q9Y248 185 aa9.85□□□□□ -0.83
CLSTN3-212ENST00000541770 PCDHB7Q9Y5E2 793 aa9.85□□□□□ -0.83
CLSTN3-212ENST00000541770 PCDHA8Q9Y5H6 950 aa9.85□□□□□ -0.83
CLSTN3-212ENST00000541770 GSTTP1A0A1W2PQM5 241 aa9.84□□□□□ -0.83
CLSTN3-212ENST00000541770 DTNBO60941 627 aa9.84□□□□□ -0.83
CLSTN3-212ENST00000541770 INSRRP14616 1297 aa9.84□□□□□ -0.83
CLSTN3-212ENST00000541770 ATF7P17544 494 aaPredicted RBP9.84□□□□□ -0.83
CLSTN3-212ENST00000541770 CA8P35219 290 aa9.84□□□□□ -0.83
CLSTN3-212ENST00000541770 TRIM29Q14134 588 aa9.84□□□□□ -0.83
CLSTN3-212ENST00000541770 MARCH8Q5T0T0 291 aa9.84□□□□□ -0.83
CLSTN3-212ENST00000541770 PCNX4Q63HM2 1172 aa9.84□□□□□ -0.83
CLSTN3-212ENST00000541770 TRAPPC12Q8WVT3 735 aa9.84□□□□□ -0.83
CLSTN3-212ENST00000541770 RIPOR3Q96MK2 946 aa9.84□□□□□ -0.83
CLSTN3-212ENST00000541770 SENP7Q9BQF6 1050 aa9.84□□□□□ -0.83
CLSTN3-212ENST00000541770 ANO3Q9BYT9 981 aa9.84□□□□□ -0.83
CLSTN3-212ENST00000541770 TMEM260Q9NX78 707 aa9.84□□□□□ -0.83
CLSTN3-212ENST00000541770 KCNJ14Q9UNX9 436 aa9.84□□□□□ -0.83
CLSTN3-212ENST00000541770 SMC3Q9UQE7 1217 aa9.84□□□□□ -0.83
CLSTN3-212ENST00000541770 DENND3A2RUS2 1198 aa9.83□□□□□ -0.84
CLSTN3-212ENST00000541770 MBLAC1A4D2B0 266 aaPredicted RBP9.83□□□□□ -0.84
CLSTN3-212ENST00000541770 RRN3P2A6NIE6 340 aa9.83□□□□□ -0.84
CLSTN3-212ENST00000541770 ADAMTS3O15072 1205 aa9.83□□□□□ -0.84
CLSTN3-212ENST00000541770 FGF18O76093 207 aa9.83□□□□□ -0.84
CLSTN3-212ENST00000541770 CYP3A4P08684 503 aa9.83□□□□□ -0.84
CLSTN3-212ENST00000541770 KCNA2P16389 499 aa9.83□□□□□ -0.84
CLSTN3-212ENST00000541770 GJB2P29033 226 aa9.83□□□□□ -0.84
CLSTN3-212ENST00000541770 SREBF1P36956 1147 aa9.83□□□□□ -0.84
CLSTN3-212ENST00000541770 ERVFC1P60507 584 aa9.83□□□□□ -0.84
CLSTN3-212ENST00000541770 FOXK2Q01167 660 aa9.83□□□□□ -0.84
CLSTN3-212ENST00000541770 MAPK8IP2Q13387 824 aaPredicted RBP9.83□□□□□ -0.84
CLSTN3-212ENST00000541770 DUSP6Q16828 381 aa9.83□□□□□ -0.84
CLSTN3-212ENST00000541770 JAKMIP3Q5VZ66 844 aa9.83□□□□□ -0.84
CLSTN3-212ENST00000541770 ASCL5Q7RTU5 278 aa9.83□□□□□ -0.84
CLSTN3-212ENST00000541770 KREMEN2Q8NCW0 462 aa9.83□□□□□ -0.84
CLSTN3-212ENST00000541770 FBXO18Q8NFZ0 1043 aa9.83□□□□□ -0.84
CLSTN3-212ENST00000541770 VN1R2Q8NFZ6 395 aa9.83□□□□□ -0.84
CLSTN3-212ENST00000541770 CRYGNQ8WXF5 182 aa9.83□□□□□ -0.84
CLSTN3-212ENST00000541770 SUSD6Q92537 303 aa9.83□□□□□ -0.84
CLSTN3-212ENST00000541770 C8orf76Q96K31 380 aa9.83□□□□□ -0.84
CLSTN3-212ENST00000541770 PPP1R16BQ96T49 567 aa9.83□□□□□ -0.84
CLSTN3-212ENST00000541770 CELF4Q9BZC1 486 aaKnown RBP9.83□□□□□ -0.84
CLSTN3-212ENST00000541770 AZI2Q9H6S1 392 aa9.83□□□□□ -0.84
CLSTN3-212ENST00000541770 BRMS1Q9HCU9 246 aa9.83□□□□□ -0.84
CLSTN3-212ENST00000541770 ENTPD7Q9NQZ7 604 aa9.83□□□□□ -0.84
CLSTN3-212ENST00000541770 HCSTQ9UBK5 93 aa9.83□□□□□ -0.84
CLSTN3-212ENST00000541770 EVPLQ92817 2033 aa9.83□□□□□ -0.84
CLSTN3-212ENST00000541770 GALR2O43603 387 aaPredicted RBP9.82□□□□□ -0.84
CLSTN3-212ENST00000541770 RPLP2P05387 115 aaKnown RBP9.82□□□□□ -0.84
CLSTN3-212ENST00000541770 KRT2P35908 639 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms