RNA–Protein interactions for RNA: ENST00000541562.5

VARS2-211, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2 BASIC

Gene VARS2, Length 3,566 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-211ENST00000541562 SSR1P43307 286 aaKnown RBP16.38■□□□□ 0.21
VARS2-211ENST00000541562 MARCKSL1P49006 195 aa16.38■□□□□ 0.21
VARS2-211ENST00000541562 ZFYVE27Q5T4F4 411 aa16.38■□□□□ 0.21
VARS2-211ENST00000541562 CBWD1Q9BRT8 395 aa16.38■□□□□ 0.21
VARS2-211ENST00000541562 MLXIPLQ9NP71 852 aa16.38■□□□□ 0.21
VARS2-211ENST00000541562 TOPORSQ9NS56 1045 aaPredicted RBP16.38■□□□□ 0.21
VARS2-211ENST00000541562 TMEM51Q9NW97 253 aa16.38■□□□□ 0.21
VARS2-211ENST00000541562 SWAP70Q9UH65 585 aa16.38■□□□□ 0.21
VARS2-211ENST00000541562 KIAA1551Q9HCM1 1747 aa16.38■□□□□ 0.21
VARS2-211ENST00000541562 ADAMTSL1Q8N6G6 1762 aa16.38■□□□□ 0.21
VARS2-211ENST00000541562 DCDC2CA8MYV0 355 aa16.38■□□□□ 0.21
VARS2-211ENST00000541562 NDUFAB1O14561 156 aa16.38■□□□□ 0.21
VARS2-211ENST00000541562 SLITRK3O94933 977 aa16.38■□□□□ 0.21
VARS2-211ENST00000541562 KCNJ1P48048 391 aa16.38■□□□□ 0.21
VARS2-211ENST00000541562 SNX1Q13596 522 aa16.38■□□□□ 0.21
VARS2-211ENST00000541562 GBP6Q6ZN66 633 aa16.38■□□□□ 0.21
VARS2-211ENST00000541562 PPM1KQ8N3J5 372 aa16.38■□□□□ 0.21
VARS2-211ENST00000541562 MRRFQ96E11 262 aaKnown RBP16.38■□□□□ 0.21
VARS2-211ENST00000541562 PI4K2AQ9BTU6 479 aa16.38■□□□□ 0.21
VARS2-211ENST00000541562 KCNMB3Q9NPA1 279 aa16.38■□□□□ 0.21
VARS2-211ENST00000541562 ASTN1O14525 1302 aa16.38■□□□□ 0.21
VARS2-211ENST00000541562 YDJCA8MPS7 323 aa16.37■□□□□ 0.21
VARS2-211ENST00000541562 IRAK1P51617 712 aa16.37■□□□□ 0.21
VARS2-211ENST00000541562 CERKQ8TCT0 537 aa16.37■□□□□ 0.21
VARS2-211ENST00000541562 TRPC5Q9UL62 973 aaPredicted RBP16.37■□□□□ 0.21
VARS2-211ENST00000541562 PPP1R9AQ9ULJ8 1098 aa16.37■□□□□ 0.21
VARS2-211ENST00000541562 ARHGEF35A5YM69 484 aa16.37■□□□□ 0.21
VARS2-211ENST00000541562 DDX3XO00571 662 aaKnown RBP eCLIP16.37■□□□□ 0.21
VARS2-211ENST00000541562 SLC16A4O15374 487 aa16.37■□□□□ 0.21
VARS2-211ENST00000541562 TGFB1I1O43294 461 aa16.37■□□□□ 0.21
VARS2-211ENST00000541562 ERVK-9P63128 1117 aa16.37■□□□□ 0.21
VARS2-211ENST00000541562 MAP2K1Q02750 393 aaPredicted RBP16.37■□□□□ 0.21
VARS2-211ENST00000541562 ASTE1Q2TB18 679 aaPredicted RBP16.37■□□□□ 0.21
VARS2-211ENST00000541562 DACT2Q5SW24 774 aa16.37■□□□□ 0.21
VARS2-211ENST00000541562 IRF2BP2Q7Z5L9 587 aa16.37■□□□□ 0.21
VARS2-211ENST00000541562 SRLQ86TD4 932 aa16.37■□□□□ 0.21
VARS2-211ENST00000541562 RNPC3Q96LT9 517 aaKnown RBP16.37■□□□□ 0.21
VARS2-211ENST00000541562 LXNQ9BS40 222 aa16.37■□□□□ 0.21
VARS2-211ENST00000541562 TSPYL1Q9H0U9 437 aa16.37■□□□□ 0.21
VARS2-211ENST00000541562 THAP2Q9H0W7 228 aa16.37■□□□□ 0.21
VARS2-211ENST00000541562 GANQ9H2C0 597 aa16.37■□□□□ 0.21
VARS2-211ENST00000541562 PODXL2Q9NZ53 605 aa16.37■□□□□ 0.21
VARS2-211ENST00000541562 KDM3AQ9Y4C1 1321 aa16.37■□□□□ 0.21
VARS2-211ENST00000541562 A0A1W2PQJ5 194 aa16.37■□□□□ 0.21
VARS2-211ENST00000541562 FOXN3O00409 490 aaPredicted RBP16.37■□□□□ 0.21
VARS2-211ENST00000541562 SART1O43290 800 aaKnown RBP16.37■□□□□ 0.21
VARS2-211ENST00000541562 ALDH1B1P30837 517 aa16.37■□□□□ 0.21
VARS2-211ENST00000541562 NAB2Q15742 525 aa16.37■□□□□ 0.21
VARS2-211ENST00000541562 MDM1Q8TC05 714 aa16.37■□□□□ 0.21
VARS2-211ENST00000541562 UNC45AQ9H3U1 944 aa16.37■□□□□ 0.21
VARS2-211ENST00000541562 NOC2LQ9Y3T9 749 aaKnown RBP16.37■□□□□ 0.21
VARS2-211ENST00000541562 ANO9A1A5B4 782 aa16.36■□□□□ 0.21
VARS2-211ENST00000541562 EGFRP00533 1210 aa16.36■□□□□ 0.21
VARS2-211ENST00000541562 H2AFZP0C0S5 128 aa16.36■□□□□ 0.21
VARS2-211ENST00000541562 SPIRE1Q08AE8 756 aa16.36■□□□□ 0.21
VARS2-211ENST00000541562 CCDC38Q502W7 563 aa16.36■□□□□ 0.21
VARS2-211ENST00000541562 SEZ6Q53EL9 994 aa16.36■□□□□ 0.21
VARS2-211ENST00000541562 H2AFVQ71UI9 128 aa16.36■□□□□ 0.21
VARS2-211ENST00000541562 SLC35C1Q96A29 364 aa16.36■□□□□ 0.21
VARS2-211ENST00000541562 MASTLQ96GX5 879 aa16.36■□□□□ 0.21
VARS2-211ENST00000541562 CTTNBP2NLQ9P2B4 639 aa16.36■□□□□ 0.21
VARS2-211ENST00000541562 GGT7Q9UJ14 662 aa16.36■□□□□ 0.21
VARS2-211ENST00000541562 SNX24Q9Y343 169 aa16.36■□□□□ 0.21
VARS2-211ENST00000541562 EN1Q05925 392 aaPredicted RBP16.36■□□□□ 0.21
VARS2-211ENST00000541562 TUBB2AQ13885 445 aa16.36■□□□□ 0.21
VARS2-211ENST00000541562 AENQ8WTP8 325 aaKnown RBP16.36■□□□□ 0.21
VARS2-211ENST00000541562 AKT1S1Q96B36 256 aa16.36■□□□□ 0.21
VARS2-211ENST00000541562 TUBB2BQ9BVA1 445 aa16.36■□□□□ 0.21
VARS2-211ENST00000541562 ZNF341Q9BYN7 854 aa16.36■□□□□ 0.21
VARS2-211ENST00000541562 ZNF233A6NK53 670 aa16.36■□□□□ 0.21
VARS2-211ENST00000541562 HIP1RO75146 1068 aa16.36■□□□□ 0.21
VARS2-211ENST00000541562 TNFAIP3P21580 790 aa16.36■□□□□ 0.21
VARS2-211ENST00000541562 RPA1P27694 616 aa16.36■□□□□ 0.21
VARS2-211ENST00000541562 PEX3P56589 373 aa16.36■□□□□ 0.21
VARS2-211ENST00000541562 FAM102BQ5T8I3 360 aa16.36■□□□□ 0.21
VARS2-211ENST00000541562 FBXW10Q5XX13 1052 aa16.36■□□□□ 0.21
VARS2-211ENST00000541562 TMEM179Q6ZVK1 233 aa16.36■□□□□ 0.21
VARS2-211ENST00000541562 TAX1BP1Q86VP1 789 aa16.36■□□□□ 0.21
VARS2-211ENST00000541562 IFT20Q8IY31 132 aa16.36■□□□□ 0.21
VARS2-211ENST00000541562 DHX38Q92620 1227 aaKnown RBP16.36■□□□□ 0.21
VARS2-211ENST00000541562 LRRC27Q9C0I9 530 aa16.36■□□□□ 0.21
VARS2-211ENST00000541562 RASSF4Q9H2L5 321 aa16.36■□□□□ 0.21
VARS2-211ENST00000541562 TMOD2Q9NZR1 351 aa16.36■□□□□ 0.21
VARS2-211ENST00000541562 CCPG1Q9ULG6 757 aa16.36■□□□□ 0.21
VARS2-211ENST00000541562 ASTN2O75129 1339 aaPredicted RBP16.35■□□□□ 0.21
VARS2-211ENST00000541562 ZC3H4Q9UPT8 1303 aaKnown RBP16.35■□□□□ 0.21
VARS2-211ENST00000541562 BTAF1O14981 1849 aa16.35■□□□□ 0.21
VARS2-211ENST00000541562 CALUO43852 315 aaPredicted RBP16.35■□□□□ 0.21
VARS2-211ENST00000541562 HOXA10P31260 410 aaPredicted RBP16.35■□□□□ 0.21
VARS2-211ENST00000541562 INPP5BP32019 993 aa16.35■□□□□ 0.21
VARS2-211ENST00000541562 STAT1P42224 750 aa16.35■□□□□ 0.21
VARS2-211ENST00000541562 PSMD2Q13200 908 aa16.35■□□□□ 0.21
VARS2-211ENST00000541562 DLGAP5Q15398 846 aa16.35■□□□□ 0.21
VARS2-211ENST00000541562 HP1BP3Q5SSJ5 553 aaPredicted RBP16.35■□□□□ 0.21
VARS2-211ENST00000541562 SLFN12Q8IYM2 578 aa16.35■□□□□ 0.21
VARS2-211ENST00000541562 NLGN1Q8N2Q7 840 aa16.35■□□□□ 0.21
VARS2-211ENST00000541562 SYT2Q8N9I0 419 aaPredicted RBP16.35■□□□□ 0.21
VARS2-211ENST00000541562 SLC35G2Q8TBE7 412 aa16.35■□□□□ 0.21
VARS2-211ENST00000541562 E7EVH7 732 aa16.35■□□□□ 0.21
VARS2-211ENST00000541562 GCOM1H8Y6P7 765 aaPredicted RBP16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms