RNA–Protein interactions for RNA: ENST00000541549.2

EIF3A-203, Transcript of eukaryotic translation initiation factor 3 subunit A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene EIF3A, Length 4,495 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3A-203ENST00000541549 PPIP5K2O43314 1243 aa12.92□□□□□ -0.34
EIF3A-203ENST00000541549 POTEIP0CG38 1075 aa12.92□□□□□ -0.34
EIF3A-203ENST00000541549 BMP3P12645 472 aa12.92□□□□□ -0.34
EIF3A-203ENST00000541549 GABPAQ06546 454 aa12.92□□□□□ -0.34
EIF3A-203ENST00000541549 TAF12Q16514 161 aa12.92□□□□□ -0.34
EIF3A-203ENST00000541549 CDC37Q16543 378 aaPredicted RBP12.92□□□□□ -0.34
EIF3A-203ENST00000541549 ZNF394Q53GI3 561 aa12.92□□□□□ -0.34
EIF3A-203ENST00000541549 POTEGQ6S5H5 508 aa12.92□□□□□ -0.34
EIF3A-203ENST00000541549 POTEEQ6S8J3 1075 aa12.92□□□□□ -0.34
EIF3A-203ENST00000541549 SRBD1Q8N5C6 995 aaKnown RBP12.92□□□□□ -0.34
EIF3A-203ENST00000541549 RNF25Q96BH1 459 aaPredicted RBP12.92□□□□□ -0.34
EIF3A-203ENST00000541549 GPR101Q96P66 508 aaPredicted RBP12.92□□□□□ -0.34
EIF3A-203ENST00000541549 EHD2Q9NZN4 543 aa12.92□□□□□ -0.34
EIF3A-203ENST00000541549 ELF1P32519 619 aa12.92□□□□□ -0.34
EIF3A-203ENST00000541549 GARSP41250 739 aaKnown RBP12.92□□□□□ -0.34
EIF3A-203ENST00000541549 RCAN1P53805 252 aa12.92□□□□□ -0.34
EIF3A-203ENST00000541549 ESRRGP62508 458 aa12.92□□□□□ -0.34
EIF3A-203ENST00000541549 KCNB1Q14721 858 aa12.92□□□□□ -0.34
EIF3A-203ENST00000541549 RFX8Q6ZV50 586 aa12.92□□□□□ -0.34
EIF3A-203ENST00000541549 DNAAF3Q8N9W5 541 aa12.92□□□□□ -0.34
EIF3A-203ENST00000541549 LRGUKQ96M69 825 aa12.92□□□□□ -0.34
EIF3A-203ENST00000541549 CSRNP1Q96S65 589 aa12.92□□□□□ -0.34
EIF3A-203ENST00000541549 MXD3Q9BW11 206 aa12.92□□□□□ -0.34
EIF3A-203ENST00000541549 SMYD3Q9H7B4 428 aa12.92□□□□□ -0.34
EIF3A-203ENST00000541549 PNMA2Q9UL42 364 aa12.92□□□□□ -0.34
EIF3A-203ENST00000541549 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.92□□□□□ -0.34
EIF3A-203ENST00000541549 ENO4A6NNW6 628 aa12.91□□□□□ -0.34
EIF3A-203ENST00000541549 TCP11X1B4DZS4 312 aa12.91□□□□□ -0.34
EIF3A-203ENST00000541549 H0YIN7 160 aa12.91□□□□□ -0.34
EIF3A-203ENST00000541549 TRIM49P0CI25 452 aa12.91□□□□□ -0.34
EIF3A-203ENST00000541549 TRIM49CP0CI26 452 aa12.91□□□□□ -0.34
EIF3A-203ENST00000541549 HNRNPH1P31943 449 aaKnown RBP12.91□□□□□ -0.34
EIF3A-203ENST00000541549 PEX3P56589 373 aa12.91□□□□□ -0.34
EIF3A-203ENST00000541549 FOXO4P98177 505 aa12.91□□□□□ -0.34
EIF3A-203ENST00000541549 KNOP1Q1ED39 458 aaKnown RBP12.91□□□□□ -0.34
EIF3A-203ENST00000541549 ST13P4Q8IZP2 240 aaPredicted RBP12.91□□□□□ -0.34
EIF3A-203ENST00000541549 LRRN4CLQ8ND94 238 aa12.91□□□□□ -0.34
EIF3A-203ENST00000541549 SLC7A3Q8WY07 619 aa12.91□□□□□ -0.34
EIF3A-203ENST00000541549 MTA3Q9BTC8 594 aa12.91□□□□□ -0.34
EIF3A-203ENST00000541549 ANLNQ9NQW6 1124 aa12.91□□□□□ -0.34
EIF3A-203ENST00000541549 ADAM22Q9P0K1 906 aa12.91□□□□□ -0.34
EIF3A-203ENST00000541549 CFAP69A5D8W1 941 aa12.91□□□□□ -0.34
EIF3A-203ENST00000541549 CFAP73A6NFT4 308 aa12.91□□□□□ -0.34
EIF3A-203ENST00000541549 EPHB1P54762 984 aa12.91□□□□□ -0.34
EIF3A-203ENST00000541549 CDR2Q01850 454 aa12.91□□□□□ -0.34
EIF3A-203ENST00000541549 MKRN4PQ13434 485 aaPredicted RBP12.91□□□□□ -0.34
EIF3A-203ENST00000541549 BYSLQ13895 437 aaKnown RBP12.91□□□□□ -0.34
EIF3A-203ENST00000541549 SH3RF3Q8TEJ3 882 aaPredicted RBP12.91□□□□□ -0.34
EIF3A-203ENST00000541549 CFAP36Q96G28 342 aa12.91□□□□□ -0.34
EIF3A-203ENST00000541549 RIOK1Q9BRS2 568 aaKnown RBP12.91□□□□□ -0.34
EIF3A-203ENST00000541549 TRIM51Q9BSJ1 452 aa12.91□□□□□ -0.34
EIF3A-203ENST00000541549 GOLPH3Q9H4A6 298 aa12.91□□□□□ -0.34
EIF3A-203ENST00000541549 EPS15L1Q9UBC2 864 aa12.91□□□□□ -0.34
EIF3A-203ENST00000541549 DIS3Q9Y2L1 958 aaKnown RBP12.91□□□□□ -0.34
EIF3A-203ENST00000541549 ITIH6Q6UXX5 1313 aa12.91□□□□□ -0.34
EIF3A-203ENST00000541549 ERVV-1B6SEH8 477 aa12.91□□□□□ -0.34
EIF3A-203ENST00000541549 H3BQF6 201 aa12.91□□□□□ -0.34
EIF3A-203ENST00000541549 PSMD14O00487 310 aa12.91□□□□□ -0.34
EIF3A-203ENST00000541549 CHRNA3P32297 505 aa12.91□□□□□ -0.34
EIF3A-203ENST00000541549 MCF2L2Q86YR7 1114 aa12.91□□□□□ -0.34
EIF3A-203ENST00000541549 KCTD6Q8NC69 237 aa12.91□□□□□ -0.34
EIF3A-203ENST00000541549 C1orf54Q8WWF1 131 aa12.91□□□□□ -0.34
EIF3A-203ENST00000541549 ATP5HO75947 161 aa12.9□□□□□ -0.34
EIF3A-203ENST00000541549 HAUS5O94927 633 aa12.9□□□□□ -0.34
EIF3A-203ENST00000541549 SLC18A3Q16572 532 aa12.9□□□□□ -0.34
EIF3A-203ENST00000541549 TBC1D9BQ66K14 1250 aa12.9□□□□□ -0.34
EIF3A-203ENST00000541549 PASD1Q8IV76 773 aa12.9□□□□□ -0.34
EIF3A-203ENST00000541549 CEP70Q8NHQ1 597 aa12.9□□□□□ -0.34
EIF3A-203ENST00000541549 ATP6V0A1Q93050 837 aa12.9□□□□□ -0.34
EIF3A-203ENST00000541549 HDAC11Q96DB2 347 aa12.9□□□□□ -0.34
EIF3A-203ENST00000541549 MIS12Q9H081 205 aa12.9□□□□□ -0.34
EIF3A-203ENST00000541549 PRDM4Q9UKN5 801 aa12.9□□□□□ -0.34
EIF3A-203ENST00000541549 LRRIQ3A6PVS8 624 aaPredicted RBP12.9□□□□□ -0.34
EIF3A-203ENST00000541549 INO80B-WBP1J3KQ70 363 aa12.9□□□□□ -0.34
EIF3A-203ENST00000541549 SPAG7O75391 227 aa12.9□□□□□ -0.34
EIF3A-203ENST00000541549 KLK7P49862 253 aa12.9□□□□□ -0.34
EIF3A-203ENST00000541549 RABL6Q3YEC7 729 aaPredicted RBP12.9□□□□□ -0.34
EIF3A-203ENST00000541549 PRMT1Q99873 361 aaKnown RBP12.9□□□□□ -0.34
EIF3A-203ENST00000541549 TRAIPQ9BWF2 469 aa12.9□□□□□ -0.34
EIF3A-203ENST00000541549 INO80BQ9C086 356 aaPredicted RBP12.9□□□□□ -0.34
EIF3A-203ENST00000541549 BARHL2Q9NY43 387 aa12.9□□□□□ -0.34
EIF3A-203ENST00000541549 THEGQ9P2T0 379 aa12.9□□□□□ -0.34
EIF3A-203ENST00000541549 IQANK1A0A1B0GTG1 560 aa12.9□□□□□ -0.34
EIF3A-203ENST00000541549 CLRN2A0PK11 232 aa12.9□□□□□ -0.34
EIF3A-203ENST00000541549 LRRC31Q6UY01 552 aa12.9□□□□□ -0.34
EIF3A-203ENST00000541549 NSMCE1Q8WV22 266 aa12.9□□□□□ -0.34
EIF3A-203ENST00000541549 MRPL46Q9H2W6 279 aaKnown RBP12.9□□□□□ -0.34
EIF3A-203ENST00000541549 ZWILCHQ9H900 591 aa12.9□□□□□ -0.34
EIF3A-203ENST00000541549 SLC4A7Q9Y6M7 1214 aa12.9□□□□□ -0.34
EIF3A-203ENST00000541549 IPO5O00410 1097 aaKnown RBP12.9□□□□□ -0.35
EIF3A-203ENST00000541549 COPEO14579 308 aa12.9□□□□□ -0.35
EIF3A-203ENST00000541549 HOXA7P31268 230 aaPredicted RBP12.9□□□□□ -0.35
EIF3A-203ENST00000541549 PHEXP78562 749 aa12.9□□□□□ -0.35
EIF3A-203ENST00000541549 C1orf146Q5VVC0 180 aa12.9□□□□□ -0.35
EIF3A-203ENST00000541549 WDR75Q8IWA0 830 aaKnown RBP12.9□□□□□ -0.35
EIF3A-203ENST00000541549 RFFLQ8WZ73 363 aa12.9□□□□□ -0.35
EIF3A-203ENST00000541549 CYFIP2Q96F07 1278 aa12.9□□□□□ -0.35
EIF3A-203ENST00000541549 C11orf70Q9BRQ4 267 aa12.9□□□□□ -0.35
EIF3A-203ENST00000541549 WDR64B1ANS9 1081 aa12.89□□□□□ -0.35
EIF3A-203ENST00000541549 UBE2Q2LH0YL09 131 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms