RNA–Protein interactions for RNA: ENST00000541488.1

PRKDC-210, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 719 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-210ENST00000541488 DRC1Q96MC2 740 aa5.84□□□□□ -1.47
PRKDC-210ENST00000541488 ADOQ96SZ5 270 aa5.84□□□□□ -1.47
PRKDC-210ENST00000541488 Q9UFV3 132 aa5.84□□□□□ -1.47
PRKDC-210ENST00000541488 OAZ3Q9UMX2 235 aa5.84□□□□□ -1.47
PRKDC-210ENST00000541488 ASB1Q9Y576 335 aa5.84□□□□□ -1.47
PRKDC-210ENST00000541488 PTPDC1A2A3K4 754 aa5.83□□□□□ -1.48
PRKDC-210ENST00000541488 GOLGA6L22H0YM25 854 aa5.83□□□□□ -1.48
PRKDC-210ENST00000541488 MATN2O00339 956 aa5.83□□□□□ -1.48
PRKDC-210ENST00000541488 DVL2O14641 736 aa5.83□□□□□ -1.48
PRKDC-210ENST00000541488 ARHGAP6O43182 974 aa5.83□□□□□ -1.48
PRKDC-210ENST00000541488 JMJD7P0C870 316 aa5.83□□□□□ -1.48
PRKDC-210ENST00000541488 STAT3P40763 770 aa5.83□□□□□ -1.48
PRKDC-210ENST00000541488 RGS3P49796 1198 aa5.83□□□□□ -1.48
PRKDC-210ENST00000541488 SELENOPP49908 381 aa5.83□□□□□ -1.48
PRKDC-210ENST00000541488 AGBL4Q5VU57 503 aa5.83□□□□□ -1.48
PRKDC-210ENST00000541488 USP30Q70CQ3 517 aa5.83□□□□□ -1.48
PRKDC-210ENST00000541488 CXXC5Q7LFL8 322 aaKnown RBP5.83□□□□□ -1.48
PRKDC-210ENST00000541488 SCYL1Q96KG9 808 aa5.83□□□□□ -1.48
PRKDC-210ENST00000541488 FBXO10Q9UK96 956 aa5.83□□□□□ -1.48
PRKDC-210ENST00000541488 TRAF5O00463 557 aa5.82□□□□□ -1.48
PRKDC-210ENST00000541488 SDHAP31040 664 aa5.82□□□□□ -1.48
PRKDC-210ENST00000541488 MECP2P51608 486 aaKnown RBP5.82□□□□□ -1.48
PRKDC-210ENST00000541488 INHBEP58166 350 aa5.82□□□□□ -1.48
PRKDC-210ENST00000541488 TGFB2P61812 414 aa5.82□□□□□ -1.48
PRKDC-210ENST00000541488 SLC6A3Q01959 620 aa5.82□□□□□ -1.48
PRKDC-210ENST00000541488 ADAM15Q13444 863 aa5.82□□□□□ -1.48
PRKDC-210ENST00000541488 EIF4HQ15056 248 aaKnown RBP5.82□□□□□ -1.48
PRKDC-210ENST00000541488 FNDC3BQ53EP0 1204 aaKnown RBP5.82□□□□□ -1.48
PRKDC-210ENST00000541488 TMEM200BQ69YZ2 307 aa5.82□□□□□ -1.48
PRKDC-210ENST00000541488 RTN4RL1Q86UN2 441 aaPredicted RBP5.82□□□□□ -1.48
PRKDC-210ENST00000541488 CHST14Q8NCH0 376 aa5.82□□□□□ -1.48
PRKDC-210ENST00000541488 CALML6Q8TD86 181 aa5.82□□□□□ -1.48
PRKDC-210ENST00000541488 FOXRED1Q96CU9 486 aaPredicted RBP5.82□□□□□ -1.48
PRKDC-210ENST00000541488 TMEM176AQ96HP8 235 aa5.82□□□□□ -1.48
PRKDC-210ENST00000541488 CDK5RAP1Q96SZ6 601 aaKnown RBP5.82□□□□□ -1.48
PRKDC-210ENST00000541488 PLA2G12BQ9BX93 195 aa5.82□□□□□ -1.48
PRKDC-210ENST00000541488 PCIF1Q9H4Z3 704 aa5.82□□□□□ -1.48
PRKDC-210ENST00000541488 CABP5Q9NP86 173 aa5.82□□□□□ -1.48
PRKDC-210ENST00000541488 PUF60Q9UHX1 559 aaKnown RBP5.82□□□□□ -1.48
PRKDC-210ENST00000541488 NPTXRO95502 500 aa5.81□□□□□ -1.48
PRKDC-210ENST00000541488 ASLP04424 464 aa5.81□□□□□ -1.48
PRKDC-210ENST00000541488 SLC9A1P19634 815 aa5.81□□□□□ -1.48
PRKDC-210ENST00000541488 PTX3P26022 381 aaPredicted RBP5.81□□□□□ -1.48
PRKDC-210ENST00000541488 APEX1P27695 318 aaKnown RBP5.81□□□□□ -1.48
PRKDC-210ENST00000541488 RANGAP1P46060 587 aaPredicted RBP5.81□□□□□ -1.48
PRKDC-210ENST00000541488 ALDH6A1Q02252 535 aaKnown RBP5.81□□□□□ -1.48
PRKDC-210ENST00000541488 PABPC4Q13310 644 aaKnown RBP eCLIP5.81□□□□□ -1.48
PRKDC-210ENST00000541488 HS1BP3Q53T59 392 aa5.81□□□□□ -1.48
PRKDC-210ENST00000541488 PRAMEF9Q5VWM5 478 aa5.81□□□□□ -1.48
PRKDC-210ENST00000541488 CDCA2Q69YH5 1023 aaPredicted RBP5.81□□□□□ -1.48
PRKDC-210ENST00000541488 CC2D1AQ6P1N0 951 aaPredicted RBP5.81□□□□□ -1.48
PRKDC-210ENST00000541488 OTOP1Q7RTM1 612 aa5.81□□□□□ -1.48
PRKDC-210ENST00000541488 UBXN4Q92575 508 aa5.81□□□□□ -1.48
PRKDC-210ENST00000541488 NAF1Q96HR8 494 aaKnown RBP5.81□□□□□ -1.48
PRKDC-210ENST00000541488 B4E1Z4 1266 aa5.8□□□□□ -1.48
PRKDC-210ENST00000541488 H7C1D1 291 aa5.8□□□□□ -1.48
PRKDC-210ENST00000541488 FHL2Q14192 279 aa5.8□□□□□ -1.48
PRKDC-210ENST00000541488 R3HDM1Q15032 1099 aaKnown RBP5.8□□□□□ -1.48
PRKDC-210ENST00000541488 ARHGAP44Q17R89 818 aa5.8□□□□□ -1.48
PRKDC-210ENST00000541488 CFAP100Q494V2 611 aa5.8□□□□□ -1.48
PRKDC-210ENST00000541488 TRIM68Q6AZZ1 485 aa5.8□□□□□ -1.48
PRKDC-210ENST00000541488 KIAA1958Q8N8K9 716 aa5.8□□□□□ -1.48
PRKDC-210ENST00000541488 CFHR4Q92496 578 aa5.8□□□□□ -1.48
PRKDC-210ENST00000541488 OR10A2Q9H208 303 aa5.8□□□□□ -1.48
PRKDC-210ENST00000541488 TMEM260Q9NX78 707 aa5.8□□□□□ -1.48
PRKDC-210ENST00000541488 H2AFY2Q9P0M6 372 aaPredicted RBP5.8□□□□□ -1.48
PRKDC-210ENST00000541488 CD2APQ9Y5K6 639 aa5.8□□□□□ -1.48
PRKDC-210ENST00000541488 KPNA6O60684 536 aa5.79□□□□□ -1.48
PRKDC-210ENST00000541488 APOL3O95236 402 aa5.79□□□□□ -1.48
PRKDC-210ENST00000541488 PRLP01236 227 aa5.79□□□□□ -1.48
PRKDC-210ENST00000541488 ACO1P21399 889 aaKnown RBP5.79□□□□□ -1.48
PRKDC-210ENST00000541488 COMTP21964 271 aa5.79□□□□□ -1.48
PRKDC-210ENST00000541488 MSX2P35548 267 aaPredicted RBP5.79□□□□□ -1.48
PRKDC-210ENST00000541488 ANTXR2P58335 489 aa5.79□□□□□ -1.48
PRKDC-210ENST00000541488 PRKD1Q15139 912 aaPredicted RBP5.79□□□□□ -1.48
PRKDC-210ENST00000541488 ZNF174Q15697 407 aa5.79□□□□□ -1.48
PRKDC-210ENST00000541488 NRN1LQ496H8 165 aa5.79□□□□□ -1.48
PRKDC-210ENST00000541488 UBE2R2Q712K3 238 aaPredicted RBP5.79□□□□□ -1.48
PRKDC-210ENST00000541488 BCL6BQ8N143 479 aaPredicted RBP5.79□□□□□ -1.48
PRKDC-210ENST00000541488 NXPE1Q8N323 547 aa5.79□□□□□ -1.48
PRKDC-210ENST00000541488 TUBGCP5Q96RT8 1024 aa5.79□□□□□ -1.48
PRKDC-210ENST00000541488 UBA6A0AVT1 1052 aaPredicted RBP5.78□□□□□ -1.48
PRKDC-210ENST00000541488 RAD17O75943 681 aa5.78□□□□□ -1.48
PRKDC-210ENST00000541488 FLT3P36888 993 aa5.78□□□□□ -1.48
PRKDC-210ENST00000541488 NEK4P51957 841 aa5.78□□□□□ -1.48
PRKDC-210ENST00000541488 ATP2C1P98194 919 aaPredicted RBP5.78□□□□□ -1.48
PRKDC-210ENST00000541488 MAP3K12Q12852 859 aa5.78□□□□□ -1.48
PRKDC-210ENST00000541488 USP39Q53GS9 565 aaKnown RBP5.78□□□□□ -1.48
PRKDC-210ENST00000541488 SLFN12LQ6IEE8 588 aa5.78□□□□□ -1.48
PRKDC-210ENST00000541488 CNNM4Q6P4Q7 775 aa5.78□□□□□ -1.48
PRKDC-210ENST00000541488 GPR135Q8IZ08 494 aa5.78□□□□□ -1.48
PRKDC-210ENST00000541488 ZNF808Q8N4W9 903 aaPredicted RBP5.78□□□□□ -1.48
PRKDC-210ENST00000541488 RNPC3Q96LT9 517 aaKnown RBP5.78□□□□□ -1.48
PRKDC-210ENST00000541488 FOXB1Q99853 325 aa5.78□□□□□ -1.48
PRKDC-210ENST00000541488 ZNF341Q9BYN7 854 aa5.78□□□□□ -1.48
PRKDC-210ENST00000541488 RBM8AQ9Y5S9 174 aaKnown RBP5.78□□□□□ -1.48
PRKDC-210ENST00000541488 ZNF891A8MT65 544 aaPredicted RBP5.77□□□□□ -1.49
PRKDC-210ENST00000541488 CBX4O00257 560 aa5.77□□□□□ -1.49
PRKDC-210ENST00000541488 ROM1Q03395 351 aa5.77□□□□□ -1.49
PRKDC-210ENST00000541488 FOXL1Q12952 345 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms