RNA–Protein interactions for RNA: ENST00000541351.3

YBX3-211, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 717 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-211ENST00000541351 FIBPO43427 364 aa10.95□□□□□ -0.66
YBX3-211ENST00000541351 ORC4O43929 436 aa10.95□□□□□ -0.66
YBX3-211ENST00000541351 DHX16O60231 1041 aaKnown RBP10.95□□□□□ -0.66
YBX3-211ENST00000541351 RPS6KA5O75582 802 aa10.95□□□□□ -0.66
YBX3-211ENST00000541351 HSD17B4P51659 736 aa10.95□□□□□ -0.66
YBX3-211ENST00000541351 PFKPQ01813 784 aa10.95□□□□□ -0.66
YBX3-211ENST00000541351 UBXN2BQ14CS0 331 aa10.95□□□□□ -0.66
YBX3-211ENST00000541351 ZBTB41Q5SVQ8 909 aa10.95□□□□□ -0.66
YBX3-211ENST00000541351 POTEGQ6S5H5 508 aa10.95□□□□□ -0.66
YBX3-211ENST00000541351 TRIM50Q86XT4 487 aa10.95□□□□□ -0.66
YBX3-211ENST00000541351 ITPRIPQ8IWB1 547 aa10.95□□□□□ -0.66
YBX3-211ENST00000541351 TBC1D5Q92609 795 aa10.95□□□□□ -0.66
YBX3-211ENST00000541351 NELL1Q92832 810 aa10.95□□□□□ -0.66
YBX3-211ENST00000541351 SENP7Q9BQF6 1050 aa10.95□□□□□ -0.66
YBX3-211ENST00000541351 RHOBTB2Q9BYZ6 727 aa10.95□□□□□ -0.66
YBX3-211ENST00000541351 FOXQ1Q9C009 403 aa10.95□□□□□ -0.66
YBX3-211ENST00000541351 MRPS17Q9Y2R5 130 aaKnown RBP10.95□□□□□ -0.66
YBX3-211ENST00000541351 ZFP37Q9Y6Q3 630 aaPredicted RBP10.95□□□□□ -0.66
YBX3-211ENST00000541351 CEP295Q9C0D2 2601 aa10.94□□□□□ -0.66
YBX3-211ENST00000541351 CHGBP05060 677 aa10.94□□□□□ -0.66
YBX3-211ENST00000541351 SNHG28P0DPA3 235 aa10.94□□□□□ -0.66
YBX3-211ENST00000541351 ARP10275 920 aa10.94□□□□□ -0.66
YBX3-211ENST00000541351 EPCAMP16422 314 aa10.94□□□□□ -0.66
YBX3-211ENST00000541351 KRT76Q01546 638 aa10.94□□□□□ -0.66
YBX3-211ENST00000541351 AASDHQ4L235 1098 aaPredicted RBP10.94□□□□□ -0.66
YBX3-211ENST00000541351 VPS52Q8N1B4 723 aa10.94□□□□□ -0.66
YBX3-211ENST00000541351 CMASQ8NFW8 434 aaPredicted RBP10.94□□□□□ -0.66
YBX3-211ENST00000541351 IER2Q9BTL4 223 aa10.94□□□□□ -0.66
YBX3-211ENST00000541351 AMNQ9BXJ7 453 aa10.94□□□□□ -0.66
YBX3-211ENST00000541351 SMARCAD1Q9H4L7 1026 aa10.94□□□□□ -0.66
YBX3-211ENST00000541351 C9IYK1 514 aa10.93□□□□□ -0.66
YBX3-211ENST00000541351 CTSAP10619 480 aa10.93□□□□□ -0.66
YBX3-211ENST00000541351 GLULP15104 373 aa10.93□□□□□ -0.66
YBX3-211ENST00000541351 RPS9P46781 194 aaKnown RBP10.93□□□□□ -0.66
YBX3-211ENST00000541351 GHRHRQ02643 423 aa10.93□□□□□ -0.66
YBX3-211ENST00000541351 RING1Q06587 406 aa10.93□□□□□ -0.66
YBX3-211ENST00000541351 PRR23BQ6ZRT6 265 aa10.93□□□□□ -0.66
YBX3-211ENST00000541351 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.93□□□□□ -0.66
YBX3-211ENST00000541351 SLC39A11Q8N1S5 342 aa10.93□□□□□ -0.66
YBX3-211ENST00000541351 C12orf50Q8NA57 414 aaPredicted RBP10.93□□□□□ -0.66
YBX3-211ENST00000541351 CDHR1Q96JP9 859 aa10.93□□□□□ -0.66
YBX3-211ENST00000541351 WDR6Q9NNW5 1121 aaKnown RBP10.93□□□□□ -0.66
YBX3-211ENST00000541351 DENND4AQ7Z401 1863 aa10.93□□□□□ -0.66
YBX3-211ENST00000541351 ASPMQ8IZT6 3477 aa10.92□□□□□ -0.66
YBX3-211ENST00000541351 CLUHO75153 1309 aa10.92□□□□□ -0.66
YBX3-211ENST00000541351 FAM170BA6NMN3 283 aa10.92□□□□□ -0.66
YBX3-211ENST00000541351 C1QTNF9BB2RNN3 333 aa10.92□□□□□ -0.66
YBX3-211ENST00000541351 GCOM1H8Y6P7 765 aaPredicted RBP10.92□□□□□ -0.66
YBX3-211ENST00000541351 RBAK-RBAKDNI3L0D1 243 aa10.92□□□□□ -0.66
YBX3-211ENST00000541351 TAF4O00268 1085 aa10.92□□□□□ -0.66
YBX3-211ENST00000541351 C1QTNF9P0C862 333 aa10.92□□□□□ -0.66
YBX3-211ENST00000541351 POLR2MP0CAP2 368 aa10.92□□□□□ -0.66
YBX3-211ENST00000541351 KLRC2P26717 231 aa10.92□□□□□ -0.66
YBX3-211ENST00000541351 CNR2P34972 360 aa10.92□□□□□ -0.66
YBX3-211ENST00000541351 TCF7P36402 384 aaPredicted RBP10.92□□□□□ -0.66
YBX3-211ENST00000541351 RBM25P49756 843 aaKnown RBP10.92□□□□□ -0.66
YBX3-211ENST00000541351 NT5C2P49902 561 aa10.92□□□□□ -0.66
YBX3-211ENST00000541351 IGBP1P78318 339 aa10.92□□□□□ -0.66
YBX3-211ENST00000541351 MLF2Q15773 248 aaPredicted RBP10.92□□□□□ -0.66
YBX3-211ENST00000541351 ASPRV1Q53RT3 343 aa10.92□□□□□ -0.66
YBX3-211ENST00000541351 CCDC178Q5BJE1 867 aa10.92□□□□□ -0.66
YBX3-211ENST00000541351 NLRX1Q86UT6 975 aa10.92□□□□□ -0.66
YBX3-211ENST00000541351 SLC22A17Q8WUG5 538 aa10.92□□□□□ -0.66
YBX3-211ENST00000541351 RSAD2Q8WXG1 361 aa10.92□□□□□ -0.66
YBX3-211ENST00000541351 SEPT1Q8WYJ6 367 aa10.92□□□□□ -0.66
YBX3-211ENST00000541351 PHKBQ93100 1093 aa10.92□□□□□ -0.66
YBX3-211ENST00000541351 INPP4AQ96PE3 977 aaPredicted RBP10.92□□□□□ -0.66
YBX3-211ENST00000541351 ZBP1Q9H171 429 aa10.92□□□□□ -0.66
YBX3-211ENST00000541351 TMX1Q9H3N1 280 aa10.92□□□□□ -0.66
YBX3-211ENST00000541351 PRMT8Q9NR22 394 aaPredicted RBP10.92□□□□□ -0.66
YBX3-211ENST00000541351 ANAPC4Q9UJX5 808 aa10.92□□□□□ -0.66
YBX3-211ENST00000541351 SUPT16HQ9Y5B9 1047 aaKnown RBP10.92□□□□□ -0.66
YBX3-211ENST00000541351 PCDHA2Q9Y5H9 948 aa10.92□□□□□ -0.66
YBX3-211ENST00000541351 FNDC1Q4ZHG4 1894 aaPredicted RBP10.91□□□□□ -0.66
YBX3-211ENST00000541351 SMIM35A0A1B0GVV1 85 aa10.91□□□□□ -0.66
YBX3-211ENST00000541351 SRRM3A6NNA2 597 aaPredicted RBP10.91□□□□□ -0.66
YBX3-211ENST00000541351 SPATA31C2B4DYI2 1134 aa10.91□□□□□ -0.66
YBX3-211ENST00000541351 FGFR1P11362 822 aa10.91□□□□□ -0.66
YBX3-211ENST00000541351 PCP11498 1178 aaKnown RBP10.91□□□□□ -0.66
YBX3-211ENST00000541351 ZSCAN20P17040 1043 aaPredicted RBP10.91□□□□□ -0.66
YBX3-211ENST00000541351 MARK3P27448 753 aa10.91□□□□□ -0.66
YBX3-211ENST00000541351 FAM189BP81408 668 aa10.91□□□□□ -0.66
YBX3-211ENST00000541351 SP4Q02446 784 aa10.91□□□□□ -0.66
YBX3-211ENST00000541351 TMEM62Q0P6H9 643 aa10.91□□□□□ -0.66
YBX3-211ENST00000541351 QRICH1Q2TAL8 776 aa10.91□□□□□ -0.66
YBX3-211ENST00000541351 RRP12Q5JTH9 1297 aaKnown RBP10.91□□□□□ -0.66
YBX3-211ENST00000541351 MTSS1LQ765P7 747 aa10.91□□□□□ -0.66
YBX3-211ENST00000541351 ADGRF4Q8IZF3 695 aa10.91□□□□□ -0.66
YBX3-211ENST00000541351 CASD1Q96PB1 797 aa10.91□□□□□ -0.66
YBX3-211ENST00000541351 DDX23Q9BUQ8 820 aaKnown RBP10.91□□□□□ -0.66
YBX3-211ENST00000541351 UBA5Q9GZZ9 404 aa10.91□□□□□ -0.66
YBX3-211ENST00000541351 AZI2Q9H6S1 392 aa10.91□□□□□ -0.66
YBX3-211ENST00000541351 GINS2Q9Y248 185 aa10.91□□□□□ -0.66
YBX3-211ENST00000541351 SSX2IPQ9Y2D8 614 aa10.91□□□□□ -0.66
YBX3-211ENST00000541351 MIA3Q5JRA6 1907 aa10.9□□□□□ -0.66
YBX3-211ENST00000541351 M0R2C6 588 aa10.9□□□□□ -0.66
YBX3-211ENST00000541351 LAMP2P13473 410 aa10.9□□□□□ -0.66
YBX3-211ENST00000541351 CTDSPL2Q05D32 466 aa10.9□□□□□ -0.66
YBX3-211ENST00000541351 SIM2Q14190 667 aaPredicted RBP10.9□□□□□ -0.66
YBX3-211ENST00000541351 TMEM266Q2M3C6 531 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms