RNA–Protein interactions for RNA: ENST00000541280.1

SUDS3-202, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

TSL 5

Gene SUDS3, Length 659 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-202ENST00000541280 ADAMTS20P59510 1910 aa7.28□□□□□ -1.24
SUDS3-202ENST00000541280 UBR3Q6ZT12 1888 aa7.28□□□□□ -1.24
SUDS3-202ENST00000541280 ZC3H12DA2A288 527 aaKnown RBP7.27□□□□□ -1.25
SUDS3-202ENST00000541280 PRRG2O14669 202 aa7.27□□□□□ -1.25
SUDS3-202ENST00000541280 PPP1R11O60927 126 aaPredicted RBP7.27□□□□□ -1.25
SUDS3-202ENST00000541280 GPTP24298 496 aa7.27□□□□□ -1.25
SUDS3-202ENST00000541280 HTRA3P83110 453 aa7.27□□□□□ -1.25
SUDS3-202ENST00000541280 CCDC184Q52MB2 194 aa7.27□□□□□ -1.25
SUDS3-202ENST00000541280 CABP7Q86V35 215 aa7.27□□□□□ -1.25
SUDS3-202ENST00000541280 NLRP10Q86W26 655 aa7.27□□□□□ -1.25
SUDS3-202ENST00000541280 LZTR1Q8N653 840 aa7.27□□□□□ -1.25
SUDS3-202ENST00000541280 MRGPRX3Q96LB0 322 aa7.27□□□□□ -1.25
SUDS3-202ENST00000541280 MMP19Q99542 508 aa7.27□□□□□ -1.25
SUDS3-202ENST00000541280 TAOK3Q9H2K8 898 aa7.27□□□□□ -1.25
SUDS3-202ENST00000541280 MYH16Q9H6N6 1097 aa7.27□□□□□ -1.25
SUDS3-202ENST00000541280 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP7.27□□□□□ -1.25
SUDS3-202ENST00000541280 TRMT112Q9UI30 125 aaKnown RBP7.27□□□□□ -1.25
SUDS3-202ENST00000541280 PLA2G2DQ9UNK4 145 aa7.27□□□□□ -1.25
SUDS3-202ENST00000541280 ADCY9O60503 1353 aa7.27□□□□□ -1.25
SUDS3-202ENST00000541280 TAF1LQ8IZX4 1826 aa7.27□□□□□ -1.25
SUDS3-202ENST00000541280 SH3TC1Q8TE82 1336 aa7.27□□□□□ -1.25
SUDS3-202ENST00000541280 NPHP3-ACAD11A0A0J9YXS1 232 aa7.26□□□□□ -1.25
SUDS3-202ENST00000541280 GLTPD2A6NH11 291 aa7.26□□□□□ -1.25
SUDS3-202ENST00000541280 B8ZZF3 427 aa7.26□□□□□ -1.25
SUDS3-202ENST00000541280 CCER2I3L3R5 266 aa7.26□□□□□ -1.25
SUDS3-202ENST00000541280 FFAR3O14843 346 aa7.26□□□□□ -1.25
SUDS3-202ENST00000541280 TOMM70O94826 608 aa7.26□□□□□ -1.25
SUDS3-202ENST00000541280 SASH1O94885 1247 aa7.26□□□□□ -1.25
SUDS3-202ENST00000541280 NTSR2O95665 410 aa7.26□□□□□ -1.25
SUDS3-202ENST00000541280 NCAM1P13591 858 aa7.26□□□□□ -1.25
SUDS3-202ENST00000541280 ATF2P15336 505 aa7.26□□□□□ -1.25
SUDS3-202ENST00000541280 VEGFAP15692 232 aaPredicted RBP7.26□□□□□ -1.25
SUDS3-202ENST00000541280 SLC9A5Q14940 896 aa7.26□□□□□ -1.25
SUDS3-202ENST00000541280 KRT24Q2M2I5 525 aa7.26□□□□□ -1.25
SUDS3-202ENST00000541280 PROSER3Q2NL68 480 aa7.26□□□□□ -1.25
SUDS3-202ENST00000541280 TWISTNBQ3B726 338 aaPredicted RBP7.26□□□□□ -1.25
SUDS3-202ENST00000541280 VWA3BQ502W6 1294 aa7.26□□□□□ -1.25
SUDS3-202ENST00000541280 DDX46Q7L014 1031 aaKnown RBP7.26□□□□□ -1.25
SUDS3-202ENST00000541280 TRIM59Q8IWR1 403 aa7.26□□□□□ -1.25
SUDS3-202ENST00000541280 C16orf71Q8IYS4 520 aaPredicted RBP7.26□□□□□ -1.25
SUDS3-202ENST00000541280 FAM9BQ8IZU0 186 aa7.26□□□□□ -1.25
SUDS3-202ENST00000541280 C8orf58Q8NAV2 365 aa7.26□□□□□ -1.25
SUDS3-202ENST00000541280 CCDC191Q8NCU4 936 aa7.26□□□□□ -1.25
SUDS3-202ENST00000541280 SUPT20HQ8NEM7 779 aa7.26□□□□□ -1.25
SUDS3-202ENST00000541280 ANAPC16Q96DE5 110 aa7.26□□□□□ -1.25
SUDS3-202ENST00000541280 PSMD1Q99460 953 aa7.26□□□□□ -1.25
SUDS3-202ENST00000541280 ISCA1Q9BUE6 129 aa7.26□□□□□ -1.25
SUDS3-202ENST00000541280 RWDD3Q9Y3V2 267 aa7.26□□□□□ -1.25
SUDS3-202ENST00000541280 C4AP0C0L4 1744 aa7.26□□□□□ -1.25
SUDS3-202ENST00000541280 TJP1Q07157 1748 aa7.26□□□□□ -1.25
SUDS3-202ENST00000541280 RIC1Q4ADV7 1423 aa7.26□□□□□ -1.25
SUDS3-202ENST00000541280 COL5A3P25940 1745 aaPredicted RBP7.25□□□□□ -1.25
SUDS3-202ENST00000541280 C7orf72A4D263 438 aa7.25□□□□□ -1.25
SUDS3-202ENST00000541280 ELL2O00472 640 aaPredicted RBP7.25□□□□□ -1.25
SUDS3-202ENST00000541280 PLA2G1BP04054 148 aaKnown RBP7.25□□□□□ -1.25
SUDS3-202ENST00000541280 ANXA1P04083 346 aa7.25□□□□□ -1.25
SUDS3-202ENST00000541280 ASGR2P07307 311 aa7.25□□□□□ -1.25
SUDS3-202ENST00000541280 FOXO4P98177 505 aa7.25□□□□□ -1.25
SUDS3-202ENST00000541280 NEXNQ0ZGT2 675 aa7.25□□□□□ -1.25
SUDS3-202ENST00000541280 SF3B3Q15393 1217 aaKnown RBP7.25□□□□□ -1.25
SUDS3-202ENST00000541280 TNNI3KQ59H18 835 aa7.25□□□□□ -1.25
SUDS3-202ENST00000541280 KSR2Q6VAB6 950 aa7.25□□□□□ -1.25
SUDS3-202ENST00000541280 CPNE8Q86YQ8 564 aa7.25□□□□□ -1.25
SUDS3-202ENST00000541280 ZBTB38Q8NAP3 1195 aaPredicted RBP7.25□□□□□ -1.25
SUDS3-202ENST00000541280 CPA5Q8WXQ8 436 aa7.25□□□□□ -1.25
SUDS3-202ENST00000541280 RELTQ969Z4 430 aa7.25□□□□□ -1.25
SUDS3-202ENST00000541280 PEX11GQ96HA9 241 aa7.25□□□□□ -1.25
SUDS3-202ENST00000541280 CAPN10Q9HC96 672 aa7.25□□□□□ -1.25
SUDS3-202ENST00000541280 CYP26B1Q9NR63 512 aa7.25□□□□□ -1.25
SUDS3-202ENST00000541280 NUDT5Q9UKK9 219 aa7.25□□□□□ -1.25
SUDS3-202ENST00000541280 UBN2Q6ZU65 1347 aa7.25□□□□□ -1.25
SUDS3-202ENST00000541280 NPHS1O60500 1241 aa7.24□□□□□ -1.25
SUDS3-202ENST00000541280 KCNH1O95259 989 aa7.24□□□□□ -1.25
SUDS3-202ENST00000541280 LIMS1P48059 325 aa7.24□□□□□ -1.25
SUDS3-202ENST00000541280 CYP4F3Q08477 520 aa7.24□□□□□ -1.25
SUDS3-202ENST00000541280 SCRN1Q12765 414 aa7.24□□□□□ -1.25
SUDS3-202ENST00000541280 FSTL1Q12841 308 aa7.24□□□□□ -1.25
SUDS3-202ENST00000541280 WWC2Q6AWC2 1192 aa7.24□□□□□ -1.25
SUDS3-202ENST00000541280 GTF2IRD2BQ6EKJ0 949 aa7.24□□□□□ -1.25
SUDS3-202ENST00000541280 B3GNT8Q7Z7M8 397 aa7.24□□□□□ -1.25
SUDS3-202ENST00000541280 GTF2IRD2Q86UP8 949 aa7.24□□□□□ -1.25
SUDS3-202ENST00000541280 CXorf38Q8TB03 319 aa7.24□□□□□ -1.25
SUDS3-202ENST00000541280 FNIP1Q8TF40 1166 aa7.24□□□□□ -1.25
SUDS3-202ENST00000541280 ZNF526Q8TF50 670 aaPredicted RBP7.24□□□□□ -1.25
SUDS3-202ENST00000541280 JDP2Q8WYK2 163 aa7.24□□□□□ -1.25
SUDS3-202ENST00000541280 ZNF428Q96B54 188 aa7.24□□□□□ -1.25
SUDS3-202ENST00000541280 NKX2-4Q9H2Z4 354 aa7.24□□□□□ -1.25
SUDS3-202ENST00000541280 GULP1Q9UBP9 304 aa7.24□□□□□ -1.25
SUDS3-202ENST00000541280 DBR1Q9UK59 544 aaKnown RBP7.24□□□□□ -1.25
SUDS3-202ENST00000541280 ATP6V0A2Q9Y487 856 aa7.24□□□□□ -1.25
SUDS3-202ENST00000541280 UBR2Q8IWV8 1755 aa7.23□□□□□ -1.25
SUDS3-202ENST00000541280 SH3D21A4FU49 640 aa7.23□□□□□ -1.25
SUDS3-202ENST00000541280 IQCA1LA6NCM1 817 aa7.23□□□□□ -1.25
SUDS3-202ENST00000541280 OTOL1A6NHN0 477 aaPredicted RBP7.23□□□□□ -1.25
SUDS3-202ENST00000541280 NOP56O00567 594 aaKnown RBP7.23□□□□□ -1.25
SUDS3-202ENST00000541280 PCCAP05165 728 aaPredicted RBP7.23□□□□□ -1.25
SUDS3-202ENST00000541280 PLS3P13797 630 aa7.23□□□□□ -1.25
SUDS3-202ENST00000541280 ERCC5P28715 1186 aaPredicted RBP7.23□□□□□ -1.25
SUDS3-202ENST00000541280 VMACQ2NL98 169 aa7.23□□□□□ -1.25
SUDS3-202ENST00000541280 MBLAC2Q68D91 279 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms