RNA–Protein interactions for RNA: ENST00000540963.1

CHFR-218, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 875 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-218ENST00000540963 ANKRD54Q6NXT1 300 aa30.48■■■□□ 2.47
CHFR-218ENST00000540963 MIS18BP1Q6P0N0 1132 aa30.48■■■□□ 2.47
CHFR-218ENST00000540963 RAB11FIP4Q86YS3 637 aa30.48■■■□□ 2.47
CHFR-218ENST00000540963 CCDC60Q8IWA6 550 aaPredicted RBP30.48■■■□□ 2.47
CHFR-218ENST00000540963 ZNF710Q8N1W2 664 aa30.48■■■□□ 2.47
CHFR-218ENST00000540963 TMEM117Q9H0C3 514 aa30.48■■■□□ 2.47
CHFR-218ENST00000540963 ZNF76P36508 570 aa30.47■■■□□ 2.47
CHFR-218ENST00000540963 COL9A3Q14050 684 aaPredicted RBP30.47■■■□□ 2.47
CHFR-218ENST00000540963 CREB3L3Q68CJ9 461 aa30.47■■■□□ 2.47
CHFR-218ENST00000540963 APOA5Q6Q788 366 aa30.47■■■□□ 2.47
CHFR-218ENST00000540963 BBXQ8WY36 941 aaPredicted RBP30.47■■■□□ 2.47
CHFR-218ENST00000540963 PGBD1Q96JS3 809 aa30.47■■■□□ 2.47
CHFR-218ENST00000540963 IBSPP21815 317 aaPredicted RBP30.46■■■□□ 2.47
CHFR-218ENST00000540963 PPM1AP35813 382 aa30.46■■■□□ 2.47
CHFR-218ENST00000540963 RBM10P98175 930 aaKnown RBP30.46■■■□□ 2.47
CHFR-218ENST00000540963 DSC3Q14574 896 aa30.46■■■□□ 2.47
CHFR-218ENST00000540963 FAM228AQ86W67 206 aa30.46■■■□□ 2.47
CHFR-218ENST00000540963 BARHL2Q9NY43 387 aa30.46■■■□□ 2.47
CHFR-218ENST00000540963 CACNA1HO95180 2353 aa30.46■■■□□ 2.47
CHFR-218ENST00000540963 SMCO2A6NFE2 343 aa30.45■■■□□ 2.47
CHFR-218ENST00000540963 DHX15O43143 795 aaKnown RBP30.45■■■□□ 2.47
CHFR-218ENST00000540963 C22orf31O95567 290 aa30.45■■■□□ 2.47
CHFR-218ENST00000540963 FUT2Q10981 343 aa30.45■■■□□ 2.47
CHFR-218ENST00000540963 LRRC2Q9BYS8 371 aa30.45■■■□□ 2.47
CHFR-218ENST00000540963 CEP131Q9UPN4 1083 aa30.45■■■□□ 2.47
CHFR-218ENST00000540963 MAFBQ9Y5Q3 323 aaPredicted RBP30.45■■■□□ 2.47
CHFR-218ENST00000540963 GPR32O75388 356 aa30.44■■■□□ 2.46
CHFR-218ENST00000540963 FGFR1P11362 822 aa30.44■■■□□ 2.46
CHFR-218ENST00000540963 ATP4AP20648 1035 aa30.44■■■□□ 2.46
CHFR-218ENST00000540963 AVPR2P30518 371 aa30.44■■■□□ 2.46
CHFR-218ENST00000540963 TECP42680 631 aa30.44■■■□□ 2.46
CHFR-218ENST00000540963 KIZQ2M2Z5 673 aa30.44■■■□□ 2.46
CHFR-218ENST00000540963 SWSAP1Q6NVH7 229 aa30.44■■■□□ 2.46
CHFR-218ENST00000540963 SYCE2Q6PIF2 218 aa30.44■■■□□ 2.46
CHFR-218ENST00000540963 PLA2G4DQ86XP0 818 aa30.44■■■□□ 2.46
CHFR-218ENST00000540963 OSMRQ99650 979 aa30.44■■■□□ 2.46
CHFR-218ENST00000540963 TCF25Q9BQ70 676 aa30.44■■■□□ 2.46
CHFR-218ENST00000540963 TBC1D22BQ9NU19 505 aa30.44■■■□□ 2.46
CHFR-218ENST00000540963 HCSTQ9UBK5 93 aa30.44■■■□□ 2.46
CHFR-218ENST00000540963 DDX39AO00148 427 aaKnown RBP30.43■■■□□ 2.46
CHFR-218ENST00000540963 IPO5O00410 1097 aaKnown RBP30.43■■■□□ 2.46
CHFR-218ENST00000540963 CYP3A4P08684 503 aa30.43■■■□□ 2.46
CHFR-218ENST00000540963 KRT17Q04695 432 aa30.43■■■□□ 2.46
CHFR-218ENST00000540963 PLPP4Q5VZY2 271 aa30.43■■■□□ 2.46
CHFR-218ENST00000540963 MCTP2Q6DN12 878 aa30.43■■■□□ 2.46
CHFR-218ENST00000540963 CRYGNQ8WXF5 182 aa30.43■■■□□ 2.46
CHFR-218ENST00000540963 ENTPD7Q9NQZ7 604 aa30.43■■■□□ 2.46
CHFR-218ENST00000540963 V9GY48 417 aaPredicted RBP30.43■■■□□ 2.46
CHFR-218ENST00000540963 WDR81Q562E7 1941 aa30.42■■■□□ 2.46
CHFR-218ENST00000540963 IGLV3-22A0A075B6J6 115 aa30.42■■■□□ 2.46
CHFR-218ENST00000540963 FAM86B1E9PN63 330 aa30.42■■■□□ 2.46
CHFR-218ENST00000540963 MAGEB2O15479 319 aa30.42■■■□□ 2.46
CHFR-218ENST00000540963 FAM86B2P0C5J1 330 aa30.42■■■□□ 2.46
CHFR-218ENST00000540963 RTN1Q16799 776 aa30.42■■■□□ 2.46
CHFR-218ENST00000540963 ZNF746Q6NUN9 644 aaPredicted RBP30.42■■■□□ 2.46
CHFR-218ENST00000540963 KCNT2Q6UVM3 1135 aa30.42■■■□□ 2.46
CHFR-218ENST00000540963 CKAP2LQ8IYA6 745 aa30.42■■■□□ 2.46
CHFR-218ENST00000540963 SMAP1Q8IYB5 467 aaPredicted RBP30.42■■■□□ 2.46
CHFR-218ENST00000540963 LRRC43Q8N309 656 aa30.42■■■□□ 2.46
CHFR-218ENST00000540963 CASD1Q96PB1 797 aa30.42■■■□□ 2.46
CHFR-218ENST00000540963 ESYT1Q9BSJ8 1104 aa30.42■■■□□ 2.46
CHFR-218ENST00000540963 NR2E1Q9Y466 385 aa30.42■■■□□ 2.46
CHFR-218ENST00000540963 VCPP55072 806 aaKnown RBP30.41■■■□□ 2.46
CHFR-218ENST00000540963 SETQ01105 290 aaPredicted RBP30.41■■■□□ 2.46
CHFR-218ENST00000540963 CASP10Q92851 521 aa30.41■■■□□ 2.46
CHFR-218ENST00000540963 SNX27Q96L92 541 aa30.41■■■□□ 2.46
CHFR-218ENST00000540963 ZNF558Q96NG5 402 aa30.41■■■□□ 2.46
CHFR-218ENST00000540963 ZBTB43O43298 467 aa30.4■■■□□ 2.46
CHFR-218ENST00000540963 VTNP04004 478 aa30.4■■■□□ 2.46
CHFR-218ENST00000540963 TPRNQ4KMQ1 711 aa30.4■■■□□ 2.46
CHFR-218ENST00000540963 RNF20Q5VTR2 975 aa30.4■■■□□ 2.46
CHFR-218ENST00000540963 LRRC55Q6ZSA7 311 aa30.4■■■□□ 2.46
CHFR-218ENST00000540963 ABI1Q8IZP0 508 aa30.4■■■□□ 2.46
CHFR-218ENST00000540963 METTL13Q8N6R0 699 aa30.4■■■□□ 2.46
CHFR-218ENST00000540963 RIPOR3Q96MK2 946 aa30.4■■■□□ 2.46
CHFR-218ENST00000540963 NECTIN4Q96NY8 510 aa30.4■■■□□ 2.46
CHFR-218ENST00000540963 ZSCAN20P17040 1043 aaPredicted RBP30.39■■■□□ 2.46
CHFR-218ENST00000540963 RCAN1P53805 252 aa30.39■■■□□ 2.46
CHFR-218ENST00000540963 APOBRQ0VD83 1088 aa30.39■■■□□ 2.46
CHFR-218ENST00000540963 UBALD2Q8IYN6 164 aa30.39■■■□□ 2.46
CHFR-218ENST00000540963 FAM167AQ96KS9 214 aa30.39■■■□□ 2.46
CHFR-218ENST00000540963 ZNF577Q9BSK1 485 aa30.39■■■□□ 2.46
CHFR-218ENST00000540963 RNF19AQ9NV58 838 aa30.39■■■□□ 2.46
CHFR-218ENST00000540963 SPG21Q9NZD8 308 aa30.39■■■□□ 2.46
CHFR-218ENST00000540963 HIDE1A8MVS5 230 aa30.38■■■□□ 2.45
CHFR-218ENST00000540963 PSAPP07602 524 aa30.38■■■□□ 2.45
CHFR-218ENST00000540963 TMOD1P28289 359 aa30.38■■■□□ 2.45
CHFR-218ENST00000540963 ITIH3Q06033 890 aa30.38■■■□□ 2.45
CHFR-218ENST00000540963 TMC7Q7Z402 723 aa30.38■■■□□ 2.45
CHFR-218ENST00000540963 ZBTB33Q86T24 672 aa30.38■■■□□ 2.45
CHFR-218ENST00000540963 MAP7D2Q96T17 732 aa30.38■■■□□ 2.45
CHFR-218ENST00000540963 TCEAL9Q9UHQ7 104 aa30.38■■■□□ 2.45
CHFR-218ENST00000540963 PCDHA10Q9Y5I2 948 aa30.38■■■□□ 2.45
CHFR-218ENST00000540963 MYO10Q9HD67 2058 aa30.38■■■□□ 2.45
CHFR-218ENST00000540963 GFRA3O60609 400 aa30.37■■■□□ 2.45
CHFR-218ENST00000540963 EIF4BP23588 611 aaKnown RBP30.37■■■□□ 2.45
CHFR-218ENST00000540963 EXOSC10Q01780 885 aaKnown RBP30.37■■■□□ 2.45
CHFR-218ENST00000540963 CES5AQ6NT32 575 aa30.37■■■□□ 2.45
CHFR-218ENST00000540963 ECHDC2Q86YB7 292 aa30.37■■■□□ 2.45
CHFR-218ENST00000540963 MRPL43Q8N983 215 aaKnown RBP30.37■■■□□ 2.45
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms