RNA–Protein interactions for RNA: ENST00000540918.2

TTC39C-203, Transcript of tetratricopeptide repeat domain 39C, humanhuman

TSL 2 BASIC

Gene TTC39C, Length 4,117 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39C-203ENST00000540918 RNF19AQ9NV58 838 aa10.36□□□□□ -0.75
TTC39C-203ENST00000540918 ZNF211Q13398 564 aaPredicted RBP10.35□□□□□ -0.75
TTC39C-203ENST00000540918 MAPK6Q16659 721 aa10.35□□□□□ -0.75
TTC39C-203ENST00000540918 TMEM270Q6UE05 265 aa10.35□□□□□ -0.75
TTC39C-203ENST00000540918 TRIM50Q86XT4 487 aa10.35□□□□□ -0.75
TTC39C-203ENST00000540918 MXRA8Q9BRK3 442 aa10.35□□□□□ -0.75
TTC39C-203ENST00000540918 UNC45AQ9H3U1 944 aa10.35□□□□□ -0.75
TTC39C-203ENST00000540918 COMMD10Q9Y6G5 202 aa10.35□□□□□ -0.75
TTC39C-203ENST00000540918 PPP1R3GB7ZBB8 358 aa10.35□□□□□ -0.75
TTC39C-203ENST00000540918 EYA4O95677 639 aa10.35□□□□□ -0.75
TTC39C-203ENST00000540918 C6orf222P0C671 652 aaPredicted RBP10.35□□□□□ -0.75
TTC39C-203ENST00000540918 CDC25BP30305 580 aa10.35□□□□□ -0.75
TTC39C-203ENST00000540918 JAK3P52333 1124 aa10.35□□□□□ -0.75
TTC39C-203ENST00000540918 MFAP3P55082 362 aa10.35□□□□□ -0.75
TTC39C-203ENST00000540918 C2CD6Q53TS8 623 aa10.35□□□□□ -0.75
TTC39C-203ENST00000540918 MUM1L1Q5H9M0 696 aa10.35□□□□□ -0.75
TTC39C-203ENST00000540918 KCTD16Q68DU8 428 aa10.35□□□□□ -0.75
TTC39C-203ENST00000540918 MSANTD4Q8NCY6 345 aa10.35□□□□□ -0.75
TTC39C-203ENST00000540918 FBXO40Q9UH90 709 aa10.35□□□□□ -0.75
TTC39C-203ENST00000540918 MYO1FO00160 1098 aa10.35□□□□□ -0.75
TTC39C-203ENST00000540918 PLEKP08567 350 aaPredicted RBP10.35□□□□□ -0.75
TTC39C-203ENST00000540918 FBXO16Q8IX29 292 aaPredicted RBP10.35□□□□□ -0.75
TTC39C-203ENST00000540918 CCDC26Q8TAB7 109 aa10.35□□□□□ -0.75
TTC39C-203ENST00000540918 PSPC1Q8WXF1 523 aaKnown RBP10.35□□□□□ -0.75
TTC39C-203ENST00000540918 NUCKS1Q9H1E3 243 aaKnown RBP10.35□□□□□ -0.75
TTC39C-203ENST00000540918 SMARCAL1Q9NZC9 954 aa10.35□□□□□ -0.75
TTC39C-203ENST00000540918 CPA4Q9UI42 421 aa10.35□□□□□ -0.75
TTC39C-203ENST00000540918 MYO9BQ13459 2157 aa10.35□□□□□ -0.75
TTC39C-203ENST00000540918 KIF1AQ12756 1690 aa10.35□□□□□ -0.75
TTC39C-203ENST00000540918 PDS5AQ29RF7 1337 aaKnown RBP10.35□□□□□ -0.75
TTC39C-203ENST00000540918 CAPN9O14815 690 aa10.35□□□□□ -0.75
TTC39C-203ENST00000540918 BUB1BO60566 1050 aaPredicted RBP10.35□□□□□ -0.75
TTC39C-203ENST00000540918 COPB2P35606 906 aa10.35□□□□□ -0.75
TTC39C-203ENST00000540918 TFDP1Q14186 410 aa10.35□□□□□ -0.75
TTC39C-203ENST00000540918 DRAP1Q14919 205 aaPredicted RBP10.35□□□□□ -0.75
TTC39C-203ENST00000540918 KCTD19Q17RG1 926 aaPredicted RBP10.35□□□□□ -0.75
TTC39C-203ENST00000540918 TWF2Q6IBS0 349 aaKnown RBP10.35□□□□□ -0.75
TTC39C-203ENST00000540918 GSPT2Q8IYD1 628 aaKnown RBP10.35□□□□□ -0.75
TTC39C-203ENST00000540918 ANKRD13AQ8IZ07 590 aa10.35□□□□□ -0.75
TTC39C-203ENST00000540918 RPS6KC1Q96S38 1066 aa10.35□□□□□ -0.75
TTC39C-203ENST00000540918 FAM184BQ9ULE4 1060 aa10.35□□□□□ -0.75
TTC39C-203ENST00000540918 BCL9LQ86UU0 1499 aa10.35□□□□□ -0.75
TTC39C-203ENST00000540918 PRKCEQ02156 737 aa10.34□□□□□ -0.75
TTC39C-203ENST00000540918 TTLL4Q14679 1199 aa10.34□□□□□ -0.75
TTC39C-203ENST00000540918 CLMNQ96JQ2 1002 aa10.34□□□□□ -0.75
TTC39C-203ENST00000540918 MTRQ99707 1265 aa10.34□□□□□ -0.75
TTC39C-203ENST00000540918 HEMGNQ9BXL5 484 aa10.34□□□□□ -0.75
TTC39C-203ENST00000540918 RRAGCQ9HB90 399 aa10.34□□□□□ -0.75
TTC39C-203ENST00000540918 SALL1Q9NSC2 1324 aa10.34□□□□□ -0.75
TTC39C-203ENST00000540918 ESYT3A0FGR9 886 aa10.34□□□□□ -0.75
TTC39C-203ENST00000540918 CCDC66A2RUB6 948 aa10.34□□□□□ -0.75
TTC39C-203ENST00000540918 MYZAPP0CAP1 466 aa10.34□□□□□ -0.75
TTC39C-203ENST00000540918 CYP11B2P19099 503 aa10.34□□□□□ -0.75
TTC39C-203ENST00000540918 VAMP7P51809 220 aa10.34□□□□□ -0.75
TTC39C-203ENST00000540918 E4F1Q66K89 784 aaPredicted RBP10.34□□□□□ -0.75
TTC39C-203ENST00000540918 FAM163AQ96GL9 167 aaPredicted RBP10.34□□□□□ -0.75
TTC39C-203ENST00000540918 HEXIM2Q96MH2 286 aaKnown RBP10.34□□□□□ -0.75
TTC39C-203ENST00000540918 PLCB1Q9NQ66 1216 aa10.34□□□□□ -0.75
TTC39C-203ENST00000540918 CDC23Q9UJX2 597 aa10.34□□□□□ -0.75
TTC39C-203ENST00000540918 PNMA2Q9UL42 364 aa10.34□□□□□ -0.75
TTC39C-203ENST00000540918 UTP11Q9Y3A2 253 aaKnown RBP10.34□□□□□ -0.75
TTC39C-203ENST00000540918 EML1O00423 815 aa10.34□□□□□ -0.75
TTC39C-203ENST00000540918 TUBB4AP04350 444 aa10.34□□□□□ -0.75
TTC39C-203ENST00000540918 ARL1P40616 181 aaPredicted RBP10.34□□□□□ -0.75
TTC39C-203ENST00000540918 SMAD1Q15797 465 aaKnown RBP10.34□□□□□ -0.75
TTC39C-203ENST00000540918 CASC4Q6P4E1 433 aa10.34□□□□□ -0.75
TTC39C-203ENST00000540918 CCDC63Q8NA47 563 aa10.34□□□□□ -0.75
TTC39C-203ENST00000540918 SLC30A5Q8TAD4 765 aa10.34□□□□□ -0.75
TTC39C-203ENST00000540918 P2RX7Q99572 595 aaKnown RBP10.34□□□□□ -0.75
TTC39C-203ENST00000540918 POP1Q99575 1024 aaKnown RBP10.34□□□□□ -0.75
TTC39C-203ENST00000540918 TARS2Q9BW92 718 aaKnown RBP10.34□□□□□ -0.75
TTC39C-203ENST00000540918 TYW1Q9NV66 732 aaKnown RBP10.34□□□□□ -0.75
TTC39C-203ENST00000540918 HESX1Q9UBX0 185 aa10.34□□□□□ -0.75
TTC39C-203ENST00000540918 HPSEQ9Y251 543 aa10.34□□□□□ -0.75
TTC39C-203ENST00000540918 E7EVH7 732 aa10.33□□□□□ -0.76
TTC39C-203ENST00000540918 RHOBTB3O94955 611 aa10.33□□□□□ -0.76
TTC39C-203ENST00000540918 ICAM1P05362 532 aa10.33□□□□□ -0.76
TTC39C-203ENST00000540918 ATP1A2P50993 1020 aa10.33□□□□□ -0.76
TTC39C-203ENST00000540918 KCNA1Q09470 495 aa10.33□□□□□ -0.76
TTC39C-203ENST00000540918 NEDD9Q14511 834 aa10.33□□□□□ -0.76
TTC39C-203ENST00000540918 RAD9BQ6WBX8 426 aa10.33□□□□□ -0.76
TTC39C-203ENST00000540918 HDXQ7Z353 690 aa10.33□□□□□ -0.76
TTC39C-203ENST00000540918 MGARPQ8TDB4 240 aa10.33□□□□□ -0.76
TTC39C-203ENST00000540918 FAM84AQ96KN4 292 aa10.33□□□□□ -0.76
TTC39C-203ENST00000540918 C11orf70Q9BRQ4 267 aa10.33□□□□□ -0.76
TTC39C-203ENST00000540918 ADGRG1Q9Y653 693 aa10.33□□□□□ -0.76
TTC39C-203ENST00000540918 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.33□□□□□ -0.76
TTC39C-203ENST00000540918 PALMO75781 387 aa10.33□□□□□ -0.76
TTC39C-203ENST00000540918 FERP16591 822 aa10.33□□□□□ -0.76
TTC39C-203ENST00000540918 RPA1P27694 616 aa10.33□□□□□ -0.76
TTC39C-203ENST00000540918 MAPK4P31152 587 aa10.33□□□□□ -0.76
TTC39C-203ENST00000540918 RNASELQ05823 741 aaKnown RBP10.33□□□□□ -0.76
TTC39C-203ENST00000540918 TKFCQ3LXA3 575 aa10.33□□□□□ -0.76
TTC39C-203ENST00000540918 NFRKBQ6P4R8 1299 aa10.33□□□□□ -0.76
TTC39C-203ENST00000540918 GIMAP8Q8ND71 665 aaPredicted RBP10.33□□□□□ -0.76
TTC39C-203ENST00000540918 MCPH1Q8NEM0 835 aa10.33□□□□□ -0.76
TTC39C-203ENST00000540918 OR6B3Q8NGW1 331 aa10.33□□□□□ -0.76
TTC39C-203ENST00000540918 IDI2Q9BXS1 227 aa10.33□□□□□ -0.76
TTC39C-203ENST00000540918 RPF1Q9H9Y2 349 aaKnown RBP10.33□□□□□ -0.76
TTC39C-203ENST00000540918 EFCC1Q9HA90 598 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms