RNA–Protein interactions for RNA: ENST00000540805.5

PROM1-220, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PROM1, Length 3,908 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-220ENST00000540805 SLC27A3Q5K4L6 730 aa5.67□□□□□ -1.5
PROM1-220ENST00000540805 AGBL2Q5U5Z8 902 aa5.67□□□□□ -1.5
PROM1-220ENST00000540805 GKAP1Q5VSY0 366 aaPredicted RBP5.67□□□□□ -1.5
PROM1-220ENST00000540805 RCSD1Q6JBY9 416 aa5.67□□□□□ -1.5
PROM1-220ENST00000540805 PDXDC1Q6P996 788 aa5.67□□□□□ -1.5
PROM1-220ENST00000540805 KLHL7Q8IXQ5 586 aa5.67□□□□□ -1.5
PROM1-220ENST00000540805 SUPT20HQ8NEM7 779 aa5.67□□□□□ -1.5
PROM1-220ENST00000540805 FLAD1Q8NFF5 587 aa5.67□□□□□ -1.5
PROM1-220ENST00000540805 OR2W6PQ8NHA6 318 aa5.67□□□□□ -1.5
PROM1-220ENST00000540805 CAMKK2Q96RR4 588 aa5.67□□□□□ -1.5
PROM1-220ENST00000540805 SH3GL3Q99963 347 aa5.67□□□□□ -1.5
PROM1-220ENST00000540805 BRIP1Q9BX63 1249 aa5.67□□□□□ -1.5
PROM1-220ENST00000540805 IMPG2Q9BZV3 1241 aa5.67□□□□□ -1.5
PROM1-220ENST00000540805 NUCKS1Q9H1E3 243 aaKnown RBP5.67□□□□□ -1.5
PROM1-220ENST00000540805 ISCUQ9H1K1 167 aa5.67□□□□□ -1.5
PROM1-220ENST00000540805 NDST4Q9H3R1 872 aa5.67□□□□□ -1.5
PROM1-220ENST00000540805 CUEDC2Q9H467 287 aa5.67□□□□□ -1.5
PROM1-220ENST00000540805 TBC1D7Q9P0N9 293 aa5.67□□□□□ -1.5
PROM1-220ENST00000540805 ZNF232Q9UNY5 417 aa5.67□□□□□ -1.5
PROM1-220ENST00000540805 SIK3Q9Y2K2 1263 aa5.67□□□□□ -1.5
PROM1-220ENST00000540805 LEMD3Q9Y2U8 911 aa5.67□□□□□ -1.5
PROM1-220ENST00000540805 COL4A5P29400 1685 aa5.67□□□□□ -1.5
PROM1-220ENST00000540805 CNTRLQ7Z7A1 2325 aa5.67□□□□□ -1.5
PROM1-220ENST00000540805 KIF3CO14782 793 aa5.67□□□□□ -1.5
PROM1-220ENST00000540805 EPHB6O15197 1021 aa5.67□□□□□ -1.5
PROM1-220ENST00000540805 PALMO75781 387 aa5.67□□□□□ -1.5
PROM1-220ENST00000540805 FTCDO95954 541 aa5.67□□□□□ -1.5
PROM1-220ENST00000540805 CLTAP09496 248 aa5.67□□□□□ -1.5
PROM1-220ENST00000540805 IL1R1P14778 569 aa5.67□□□□□ -1.5
PROM1-220ENST00000540805 PLCB3Q01970 1234 aa5.67□□□□□ -1.5
PROM1-220ENST00000540805 MTMR3Q13615 1198 aa5.67□□□□□ -1.5
PROM1-220ENST00000540805 CUL1Q13616 776 aa5.67□□□□□ -1.5
PROM1-220ENST00000540805 R3HDM1Q15032 1099 aaKnown RBP5.67□□□□□ -1.5
PROM1-220ENST00000540805 MAN2A1Q16706 1144 aa5.67□□□□□ -1.5
PROM1-220ENST00000540805 DCAF17Q5H9S7 520 aaPredicted RBP5.67□□□□□ -1.5
PROM1-220ENST00000540805 SPOUT1Q5T280 376 aaKnown RBP5.67□□□□□ -1.5
PROM1-220ENST00000540805 CPLX4Q7Z7G2 160 aa5.67□□□□□ -1.5
PROM1-220ENST00000540805 CCDC84Q86UT8 332 aaPredicted RBP5.67□□□□□ -1.5
PROM1-220ENST00000540805 PNMA8AQ86V59 439 aaPredicted RBP5.67□□□□□ -1.5
PROM1-220ENST00000540805 HOOK3Q86VS8 718 aa5.67□□□□□ -1.5
PROM1-220ENST00000540805 BLIDQ8IZY5 108 aa5.67□□□□□ -1.5
PROM1-220ENST00000540805 C4orf32Q8N8J7 132 aa5.67□□□□□ -1.5
PROM1-220ENST00000540805 RDH13Q8NBN7 331 aa5.67□□□□□ -1.5
PROM1-220ENST00000540805 SPIRE2Q8WWL2 714 aa5.67□□□□□ -1.5
PROM1-220ENST00000540805 TBC1D5Q92609 795 aa5.67□□□□□ -1.5
PROM1-220ENST00000540805 CCSER1Q9C0I3 900 aa5.67□□□□□ -1.5
PROM1-220ENST00000540805 DNAI2Q9GZS0 605 aa5.67□□□□□ -1.5
PROM1-220ENST00000540805 PCDH10Q9P2E7 1040 aa5.67□□□□□ -1.5
PROM1-220ENST00000540805 POLLQ9UGP5 575 aa5.67□□□□□ -1.5
PROM1-220ENST00000540805 FRMPD2Q68DX3 1309 aaPredicted RBP5.67□□□□□ -1.5
PROM1-220ENST00000540805 SPDYE5A6NIY4 337 aa5.67□□□□□ -1.5
PROM1-220ENST00000540805 LINGO3P0C6S8 592 aa5.67□□□□□ -1.5
PROM1-220ENST00000540805 RFX1P22670 979 aa5.67□□□□□ -1.5
PROM1-220ENST00000540805 RNASE9P60153 205 aaKnown RBP5.67□□□□□ -1.5
PROM1-220ENST00000540805 TROAPQ12815 778 aa5.67□□□□□ -1.5
PROM1-220ENST00000540805 DIXDC1Q155Q3 683 aa5.67□□□□□ -1.5
PROM1-220ENST00000540805 TBC1D10BQ4KMP7 808 aaPredicted RBP5.67□□□□□ -1.5
PROM1-220ENST00000540805 CAPRIN2Q6IMN6 1127 aaKnown RBP5.67□□□□□ -1.5
PROM1-220ENST00000540805 CNNM4Q6P4Q7 775 aa5.67□□□□□ -1.5
PROM1-220ENST00000540805 TMC4Q7Z404 712 aa5.67□□□□□ -1.5
PROM1-220ENST00000540805 NCAPG2Q86XI2 1143 aa5.67□□□□□ -1.5
PROM1-220ENST00000540805 ANKRD35Q8N283 1001 aa5.67□□□□□ -1.5
PROM1-220ENST00000540805 SRBD1Q8N5C6 995 aaKnown RBP5.67□□□□□ -1.5
PROM1-220ENST00000540805 EIF1ADQ8N9N8 165 aaKnown RBP5.67□□□□□ -1.5
PROM1-220ENST00000540805 UBLCP1Q8WVY7 318 aaPredicted RBP5.67□□□□□ -1.5
PROM1-220ENST00000540805 RAPGEF5Q92565 580 aa5.67□□□□□ -1.5
PROM1-220ENST00000540805 SAAL1Q96ER3 474 aa5.67□□□□□ -1.5
PROM1-220ENST00000540805 DCP1AQ9NPI6 582 aaPredicted RBP5.67□□□□□ -1.5
PROM1-220ENST00000540805 SWAP70Q9UH65 585 aa5.67□□□□□ -1.5
PROM1-220ENST00000540805 SDK1Q7Z5N4 2213 aa5.67□□□□□ -1.5
PROM1-220ENST00000540805 BRCA1P38398 1863 aaKnown RBP5.67□□□□□ -1.5
PROM1-220ENST00000540805 PTPRZ1P23471 2315 aaPredicted RBP5.67□□□□□ -1.5
PROM1-220ENST00000540805 MGRN1O60291 552 aa5.67□□□□□ -1.5
PROM1-220ENST00000540805 BUB1BO60566 1050 aaPredicted RBP5.67□□□□□ -1.5
PROM1-220ENST00000540805 DIAPH2O60879 1101 aa5.67□□□□□ -1.5
PROM1-220ENST00000540805 FLOT1O75955 427 aa5.67□□□□□ -1.5
PROM1-220ENST00000540805 ATP6V1G2O95670 118 aa5.67□□□□□ -1.5
PROM1-220ENST00000540805 PAEPP09466 180 aa5.67□□□□□ -1.5
PROM1-220ENST00000540805 ARL1P40616 181 aaPredicted RBP5.67□□□□□ -1.5
PROM1-220ENST00000540805 ABL2P42684 1182 aa5.67□□□□□ -1.5
PROM1-220ENST00000540805 NOVP48745 357 aa5.67□□□□□ -1.5
PROM1-220ENST00000540805 SLC8A3P57103 927 aa5.67□□□□□ -1.5
PROM1-220ENST00000540805 UBXN2AP68543 259 aa5.67□□□□□ -1.5
PROM1-220ENST00000540805 ZNF844Q08AG5 666 aa5.67□□□□□ -1.5
PROM1-220ENST00000540805 STK4Q13043 487 aa5.67□□□□□ -1.5
PROM1-220ENST00000540805 PFKFB3Q16875 520 aaPredicted RBP5.67□□□□□ -1.5
PROM1-220ENST00000540805 TRIM68Q6AZZ1 485 aa5.67□□□□□ -1.5
PROM1-220ENST00000540805 HIBCHQ6NVY1 386 aaPredicted RBP5.67□□□□□ -1.5
PROM1-220ENST00000540805 USP38Q8NB14 1042 aa5.67□□□□□ -1.5
PROM1-220ENST00000540805 HOOK2Q96ED9 719 aa5.67□□□□□ -1.5
PROM1-220ENST00000540805 INPP4AQ96PE3 977 aaPredicted RBP5.67□□□□□ -1.5
PROM1-220ENST00000540805 EPAS1Q99814 870 aa5.67□□□□□ -1.5
PROM1-220ENST00000540805 KDM4CQ9H3R0 1056 aa5.67□□□□□ -1.5
PROM1-220ENST00000540805 NOD2Q9HC29 1040 aa5.67□□□□□ -1.5
PROM1-220ENST00000540805 IL17RBQ9NRM6 502 aa5.67□□□□□ -1.5
PROM1-220ENST00000540805 NOVA2Q9UNW9 492 aaKnown RBP5.67□□□□□ -1.5
PROM1-220ENST00000540805 TMEM110-MUSTN1A8MSY1 372 aa5.66□□□□□ -1.5
PROM1-220ENST00000540805 TRAF5O00463 557 aa5.66□□□□□ -1.5
PROM1-220ENST00000540805 ZBED4O75132 1171 aa5.66□□□□□ -1.5
PROM1-220ENST00000540805 GDF11O95390 407 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms